Coregonus clupeaformis (lake whitefish): 121534217
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Entry
121534217 CDS
T08357
Symbol
eif5b
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cclu03012
]
121534217 (eif5b)
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-5
121534217 (eif5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
ATP_bind_1
Roc
GTP_EFTU_D2
Sec23_helical
Motif
Other DBs
NCBI-GeneID:
121534217
NCBI-ProteinID:
XP_045061583
LinkDB
All DBs
Position
20:complement(61724802..61744581)
Genome browser
AA seq
1246 aa
AA seq
DB search
MGKKQKKSGEDSAKDDGIDLDALAAEIEGAGASKEQGKGKAKKKKDKKKEEFDEDDILKE
LEELSLETTGAKGSKKPDATDEPESAAEPPPPTKAEKKKTRKGKRASLEDDDGEDEEVSG
TGHVGKEDKQKDKTTSAAPAAAAAGSDSEDEASRTRRKPKAGKKGGRKEASDEEEEDEDG
GARKGGGGGEDDSDDDGSVDASQAGKKGKKKGKAKADDEEEEEEEGTFKMKTAAQKKAEK
KERDRKKKEEDRAKLKKQKEKEEEKEGSTEVAAVPKKEKEVVKKSEPAAPAPAAETEAAA
EIEDQEGADPQGEAADEVLETINEEEGGDKKGKKDKKKKKGDKEKEEKKKGPSKATVKAM
QEALARMKEEEERAQKEEEENLRRLEEQEAQRLEQERLEQERKEKKKQKEKERKERLKKE
GKLLTKAQKEARARAEATLELLKAQGIEVPSKDDSVPKKKPVYGDKRKKETPQAQTPEGN
SLFQSTSNTFPTAKSLIYSFVCASSLIPPLPRSETSEVEQKAESAVDDWEAIAETIDQDK
ELKKVHIEVKPETPKQPQQKPSSQPEEEEDDEDEEEEDDEEEEESEEEEEKESQPHAPQQ
APATKRKGGKESSESSSDSDSDDDLTKEERIYDKAKKRIEKRRAENIKNINLDKLRSPVV
CVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAIVEQTKMVKNFNNEAIK
IPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTLESINLLKEKKCPFIVA
LNKIDRLYDWKKSPDTDVVATLKKQKKNTKDEFDERAKAVIVEFAQQGLNAALFHENKDP
RTFVSLVPTSAHSGDGMGNLIALLVELTQTMLARRLAHCDELRAQVMEVKALPGMGTTID
VILINGVLREGMTIIVPGVEGPIVTQIRGLLLPPPMKELRVKNQYEKHKEVSTAQGVKIL
GKDLEKTLAGLPLLVAHKEDEVAVLRDELVRELKQTLNSIKLEEKGVYVQASTLGSLEAL
LEFLRVSKVPYAGINIGPVHKKDVMKASTMLEHDPQYATILAFDVKVERDSQEMADSLGV
RVFSAEIIYHLFDAFTKYREDYKKAKQDEFKHIAVFPTKLKILPQFIFNSRDPIVMGVNV
EAGVLRQGTPLCVPSKGFVDIGIVTSIEINHKMVDSAKKGQEICIKIEPIPGEAPKMFGR
HFEATDILVSKITRASIDALKNWFRDEMGKSDWQLIMELKKTFEII
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagaaaaagtcaggcgaagacagtgccaaagacgatggcatcgacctt
gatgccctagcagcagaaatcgaaggcgcgggagcctccaaggaacaaggtaaaggaaaa
gccaagaagaagaaagacaaaaagaaagaggaatttgatgaagatgacatcctgaaagag
ctggaggaactgtctcttgaaaccacgggagctaaaggcagcaagaaaccagacgccaca
gacgagccggagagtgccgccgagccgccgccgcccaccaaagcagagaagaagaagacg
cggaagggcaagcgagccagcctggaggatgacgacggggaagacgaagaggtttcgggt
acgggtcacgtgggaaaggaggacaagcagaaggacaagacgacgtctgctgcccccgct
gctgctgctgctggctcagactccgaggacgaggcctcacggacccggaggaaacctaag
gcagggaagaaaggaggccgcaaggaggcctcggacgaggaagaggaggatgaggatgga
ggtgcgaggaaaggggggggaggaggggaggatgattcagacgatgacggctcggtggac
gcgtcgcaggccggaaagaaaggcaagaagaaaggtaaagccaaggcagacgatgaagag
gaggaagaggaggagggaaccttcaagatgaagacggccgctcagaagaaagcagagaag
aaggagagagaccgcaagaagaaagaggaggacagggctaagctgaagaagcagaaagag
aaggaggaggagaaagaggggagtactgaggtggcagcagtgcctaagaaagagaaagag
gtagtgaagaagagtgagccagcggccccagctccagcagcagagacggaggcagcagca
gagattgaagatcaggaaggggctgatcctcaaggagaggctgccgatgaggtgcttgaa
acaattaatgaagaggaagggggagacaagaagggcaagaaagacaagaagaagaagaag
ggggacaaggagaaagaggagaagaagaagggacccagcaaggccacagtgaaggccatg
caggaggctctggctcgcatgaaggaggaagaggagcgcgcccagaaggaggaagaggag
aacctgcgtcgcctggaagagcaggaggctcagagactggagcaggagcgcttggaacag
gagcgcaaggagaagaagaaacagaaggagaaggagaggaaggagaggctgaagaaggag
ggcaaactgctgaccaaagcccagaaagaggcccgggccagggctgaggccacacttgaa
ctactgaaggcccagggtattgaagtgccatccaaagacgactcggtgccaaagaagaag
ccagtgtacggagacaagaggaaaaaagaaaccccacaagcacagactcctgaaggtaac
agcctcttccaatccacgtcaaatacctttccaactgcaaaatcattgatctattcattc
gtttgtgcctcatccctcattcctcctcttccccggtcagagacctcagaggtagagcag
aaagctgagtctgcagttgatgactgggaggctatcgctgagaccatcgaccaggacaaa
gagctgaagaaggtccacattgaggtgaagccagagacgccaaagcagccccaacagaaa
ccctcgtcacagccggaggaagaggaggacgatgaggacgaggaggaagaggatgatgag
gaggaggaggagagtgaggaggaggaggagaaggagagtcagcctcacgcaccgcagcag
gccccagccacaaagaggaagggagggaaggagagctcagagtccagtagtgacagcgac
tcagacgatgatctcactaaagaggagcggatctacgacaaggccaagaagcgtattgag
aaacgtcgagcagagaacataaagaacatcaacctggacaagctccgctcccccgtggtc
tgtgtactgggccacgtagacacaggcaagaccaagatcctggacaagctgaggcatact
cacgtacaggacggagaggcaggagggatcacccaacagatcggagccactaacgtacct
ctggaggccatcgtggagcagaccaagatggtgaagaacttcaacaacgaggccattaaa
atcccaggaatgcttatcatcgacaccccaggccacgagtctttcagtaacctgaggaac
cggggcagctctctgtgtgacatagccatcctggtggtggacatcatgcacggtctggag
cctcagaccctggagtccatcaacctgctcaaggagaagaagtgtcccttcatcgtagca
cttaacaagattgaccgtctgtatgactggaagaagagtccggacacagacgtggtggcc
acactgaagaagcagaagaagaacaccaaggatgagtttgacgagagggccaaagctgtc
atcgtggagttcgcacagcagggtctgaacgcagccctcttccatgagaacaaggaccct
aggacctttgtgtctctggtgcccacgtcggcccactccggggacggcatgggcaacctg
atcgctctgctggtggagctcacccagaccatgctagcacgccgcctggctcactgcgac
gagctcagggctcaggtcatggaggtgaaagccctgcctggtatgggcaccacgatagat
gtgatcctgatcaatggggttctccgggagggaatgaccatcatcgtcccgggggtggag
ggacccatcgtcacccagatcagggggctgctgctgcctccacccatgaaggagctccgg
gtcaagaaccagtatgagaaacataaggaggtgtctacagcccagggagtgaagatcctg
gggaaagacctggagaaaaccctggcagggctccccctgctggtggcccacaaggaggac
gaggtggccgtgctcagggatgagttggtgcgggagctgaaacagacgctgaactccatc
aagctggaggagaagggtgtgtacgtccaggcctccaccctcggatccctggaagccttg
ctcgagttcctacgagtgtccaaagtgccttacgctggcatcaacatcggtccagttcac
aagaaagacgtgatgaaagcttccactatgctggagcatgacccacagtatgcaacgatc
ctggcgtttgatgtgaaggtggagagggactcccaggagatggctgacagtctgggggtg
agggtgttcagtgctgagatcatctaccacctgtttgatgccttcaccaagtacagagag
gactacaagaaggccaagcaggacgagttcaaacacattgcggtgttccccactaagctg
aagatcctgcctcagttcatcttcaactctagagaccccatcgtcatgggagtcaacgtg
gaggctggggtcctcagacagggaaccccactctgtgtgcccagcaaggggtttgtggac
attggcatcgtgaccagcattgagatcaaccacaagatggtggacagtgccaagaagggc
caggagatctgtataaagatcgaaccgatccctggagaggcacccaagatgttcggccga
cactttgaggccaccgacatcctcgtcagcaagatcaccagagcgtccatcgatgccctg
aagaactggttcagagacgagatgggtaaatctgactggcagcttatcatggagcttaag
aagacttttgaaatcatctga
DBGET
integrated database retrieval system
