Coregonus clupeaformis (lake whitefish): 121534267
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Entry
121534267 CDS
T08357
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121534267 (brat1)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121534267 (brat1)
BRITE hierarchy
Motif
Pfam:
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
121534267
NCBI-ProteinID:
XP_045061596
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All DBs
Position
20:complement(62127008..62160725)
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AA seq
1077 aa
AA seq
DB search
MHALTSLSSMDSECLVLLPRVCSVLADPRQSLPDDTSLEKLLDWFTGLTKEDRGLALLES
CPCLVDYISTVCLDKTTGPSMLSFSLKLSGLLAASQHGFNLLQDRSILGVAYDSECWQVA
GLWEDPSVRIGWIHGLSNMMHHPQAFHFLDQAGLTKPLLQLQTDPSLFVASAANHLLARL
LTFKQPATTSHTTQGNGLTVPPNTEEEELAVTMATSPGSGRSVTMEILKHLESSLESDSH
TQVLQGLRLLALTLPELEAPLWGLVIRRVLRPLEGLVLEGRGGGVTQPLMDVLLATYRSG
PCDSRLVSLMASMLNSQNPSDAALCAAATLRLKTCPPDLRQKAVAVLLGPLQMVTGVTLL
DRPNDRHADQQTDHRHADQQTDHRHADQQTDHRHADQQTDHRHADQQTDHRHADQQTDHR
HADQQTDHRHADQQIDHRHADQQIDHRHADQQIDHRHADQQIDHRHADQQIDHRHTEQID
HRHADQQIDHRHADQQTDHRRIDQQMDHRQTDEDNRQTDTDQDRQTEGRSSLSLLLDHLN
QKPSCISLLCLCVSSTPYITDMESSASVILAVVSLLRICNGHSPSTESKAPIGCSKASTN
LIGCSKVQRCGLDSLASLNTCSGAVELVVEVFHVLLQYLQNPDSDPTVLQKTYQAMLRWL
SVSAEPSSLADLVNEDLLPVLRKRVCDVRWEVRDSTLEFLGQLCACEALACTVTPILLGA
LCDQESYVRASAISALARTLPLPLSGLQGEAGNHTQEEAVSQLLDILSQDSEGFARRAVV
QFFISWLKTHPSSSSSSSSSSLRSVLSLGSTDLDWEVKVHTLELVDLLMEETLPGHQESE
LWSAPPHYGGSGGPNLLTHTNHTHPYAVAPNQPSALLTHTPTDTHTPHTHASVVCGLSRL
VELGVVTALLNGLFDCDRPVALKACSLLLRLRDMVCPRSLGKGAMTTDDATATVAKVTFD
LRGQVWEREVMRKLQEKRGSDWVRESREVGCDRLNRNRVSDGTDGAGSEACDRVTGESVC
EGSVTVCEVLWSLGLEERQSVLSQSSDHVQNSPLSLLQDILNATDTSHAEEVIVDCY
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcactgacatctttaagcagcatggacagtgagtgcctggtgctgctgcctcgg
gtgtgttctgtactagcggaccccagacagtccctaccagatgacaccagcctcgagaaa
ctgctggactggttcaccggtctcaccaaggaggaccgtggcctggccctgttggagtcc
tgcccctgtctggtggactacatatccaccgtgtgtctggataaaactacaggtcccagc
atgctttccttcagcctcaaactttccggcctgctggcggccagccaacacggcttcaac
ctgctgcaggatcgatccatcctgggcgtggcctacgacagcgagtgctggcaggtggct
ggcctatgggaggatccgagcgtgcggattggctggatccatggcctgagtaacatgatg
caccacccacaggccttccacttcctggatcaggctggcctgaccaaacccctcctccag
ctacagactgaccccagcctattcgttgcctcggccgcaaatcacctcttggcccgcctc
ctgactttcaaacaaccagccacaacctcacacacaacccaggggaatggcctcactgtt
ccacccaatacggaagaggaggaattggccgtaaccatggcgacaagtccaggaagcggg
cgttccgtcaccatggagatcttgaagcacctggaaagctctctggagtcagacagccac
acccaggtgctccaggggctgaggctgctggctctgactctccccgagctggaggctcct
ctctggggcttggtgatcaggcgagtcctgaggcctctggaggggttggtcctagaaggc
cgcggaggaggagtcacacaacctctcatggacgtcctactggctacatacaggtccggg
ccgtgtgactccagactcgtctctctgatggcgtccatgttgaactcccagaatccctcc
gacgctgcgctgtgtgctgctgccaccctccgtctgaagacctgccctccagacctcaga
cagaaggctgtcgctgttctactgggacctctacagatggttactggagtaactctactg
gacaggcccaatgacagacacgctgatcaacagactgaccacagacacgctgatcaacag
actgaccacagacacgctgatcaacagactgaccacagacacgctgatcaacagactgac
cacagacacgctgatcaacagactgaccacagacacgctgatcaacagactgaccacaga
cacgctgatcaacagactgaccacagacacgctgatcaacagattgaccacagacacgct
gatcaacagattgaccacagacacgctgatcaacagattgaccacagacacgctgatcaa
cagattgaccacagacacgctgatcaacagattgaccacagacacactgaacagattgac
cacagacacgctgatcaacagattgaccacagacacgctgatcaacagactgaccacaga
cgcattgatcaacagatggaccacagacagactgatgaagataacagacagacggacact
gaccaggacagacagacggagggccgtagctctctctctctccttctggatcatctcaat
cagaaaccctcctgtatctctctgctctgtctgtgtgtgtccagcactccctacataaca
gacatggagtcatctgcctctgtcatccttgctgtggtgtcactcctgaggatctgtaac
ggccactccccctccactgagagcaaggctcctattggctgtagcaaagcctccaccaac
ctgattggctgcagcaaggtccagaggtgtggcctagactccttggctagccttaacacc
tgctctggagctgtggaactggtggtggaggtgttccatgttctactgcagtacctacag
aaccctgactcagaccccaccgtcctccagaagacctaccaggccatgttgaggtggctg
agtgtgtctgcagagccttcctcactggctgatctggtcaatgaagacctcctgcccgtg
ctgaggaagcgtgtgtgtgacgtgcgttgggaggttcgagactccactctagagttcctc
ggccagctgtgtgcgtgtgaggcgttggcctgcactgtcacccctatcctgctgggggcg
ctgtgtgatcaggagagctatgtgagggctagtgccatctctgccctggccaggactcta
ccgctaccactcagcggcctgcagggggaggcagggaaccatacacaggaggaggccgtg
agtcagttactagacatcctctctcaggattcagagggcttcgccagacgtgctgtggtc
cagttcttcatcagctggctaaagacacacccatcatcatcctcctcctcctcctcctcc
tcgctgcgttctgtcctatcgctgggcagcactgacctggactgggaggtcaaagttcac
accctggagctggttgacctcctgatggaggaaacacttccaggtcaccaggagtcagag
ctgtggtcagctcctccccactacggtggctctggagggccaaacctactaacacacact
aaccacacacacccttacgctgtggcgccaaaccagccctcagcccttctcacacacacc
ccgactgacacacacaccccccacacacacgcatctgtagtgtgtggtctgtctaggttg
gtagagctaggtgttgtaacagcgttactgaacggcctgtttgactgtgacagacctgta
gctttaaaagcctgtagtctgttgctacgactacgagacatggtgtgtccccggtcgcta
gggaaaggtgctatgacgactgacgacgccacggcaacagttgccaaggtgacttttgac
ctgaggggtcaggtttgggagcgggaggtcatgaggaagttacaggagaagagaggatct
gattgggttagagagtccagggaagtaggttgtgataggctgaacaggaacagagtttct
gatgggacagacggggctggttccgaagcctgtgatagggtgacaggggagagtgtgtgt
gagggtagtgtgacggtctgtgaggtgctgtggtcgttgggtctggaggagagacagagt
gtgttatctcagagtagtgaccacgtccagaactcacctctctctttactgcaggacata
ctgaacgctacagacacatcacacgctgaggaagttatagtggactgttactga
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