KEGG   Coregonus clupeaformis (lake whitefish): 121534267
Entry
121534267         CDS       T08357                                 
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1
  KO
K23112  BRCA1-associated ATM activator 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121534267 (brat1)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     121534267 (brat1)
Motif
Pfam: HEAT_2 HEAT
Other DBs
NCBI-GeneID: 121534267
NCBI-ProteinID: XP_045061596
LinkDB
Position
20:complement(62127008..62160725)
AA seq 1077 aa
MHALTSLSSMDSECLVLLPRVCSVLADPRQSLPDDTSLEKLLDWFTGLTKEDRGLALLES
CPCLVDYISTVCLDKTTGPSMLSFSLKLSGLLAASQHGFNLLQDRSILGVAYDSECWQVA
GLWEDPSVRIGWIHGLSNMMHHPQAFHFLDQAGLTKPLLQLQTDPSLFVASAANHLLARL
LTFKQPATTSHTTQGNGLTVPPNTEEEELAVTMATSPGSGRSVTMEILKHLESSLESDSH
TQVLQGLRLLALTLPELEAPLWGLVIRRVLRPLEGLVLEGRGGGVTQPLMDVLLATYRSG
PCDSRLVSLMASMLNSQNPSDAALCAAATLRLKTCPPDLRQKAVAVLLGPLQMVTGVTLL
DRPNDRHADQQTDHRHADQQTDHRHADQQTDHRHADQQTDHRHADQQTDHRHADQQTDHR
HADQQTDHRHADQQIDHRHADQQIDHRHADQQIDHRHADQQIDHRHADQQIDHRHTEQID
HRHADQQIDHRHADQQTDHRRIDQQMDHRQTDEDNRQTDTDQDRQTEGRSSLSLLLDHLN
QKPSCISLLCLCVSSTPYITDMESSASVILAVVSLLRICNGHSPSTESKAPIGCSKASTN
LIGCSKVQRCGLDSLASLNTCSGAVELVVEVFHVLLQYLQNPDSDPTVLQKTYQAMLRWL
SVSAEPSSLADLVNEDLLPVLRKRVCDVRWEVRDSTLEFLGQLCACEALACTVTPILLGA
LCDQESYVRASAISALARTLPLPLSGLQGEAGNHTQEEAVSQLLDILSQDSEGFARRAVV
QFFISWLKTHPSSSSSSSSSSLRSVLSLGSTDLDWEVKVHTLELVDLLMEETLPGHQESE
LWSAPPHYGGSGGPNLLTHTNHTHPYAVAPNQPSALLTHTPTDTHTPHTHASVVCGLSRL
VELGVVTALLNGLFDCDRPVALKACSLLLRLRDMVCPRSLGKGAMTTDDATATVAKVTFD
LRGQVWEREVMRKLQEKRGSDWVRESREVGCDRLNRNRVSDGTDGAGSEACDRVTGESVC
EGSVTVCEVLWSLGLEERQSVLSQSSDHVQNSPLSLLQDILNATDTSHAEEVIVDCY
NT seq 3234 nt   +upstreamnt  +downstreamnt
atgcacgcactgacatctttaagcagcatggacagtgagtgcctggtgctgctgcctcgg
gtgtgttctgtactagcggaccccagacagtccctaccagatgacaccagcctcgagaaa
ctgctggactggttcaccggtctcaccaaggaggaccgtggcctggccctgttggagtcc
tgcccctgtctggtggactacatatccaccgtgtgtctggataaaactacaggtcccagc
atgctttccttcagcctcaaactttccggcctgctggcggccagccaacacggcttcaac
ctgctgcaggatcgatccatcctgggcgtggcctacgacagcgagtgctggcaggtggct
ggcctatgggaggatccgagcgtgcggattggctggatccatggcctgagtaacatgatg
caccacccacaggccttccacttcctggatcaggctggcctgaccaaacccctcctccag
ctacagactgaccccagcctattcgttgcctcggccgcaaatcacctcttggcccgcctc
ctgactttcaaacaaccagccacaacctcacacacaacccaggggaatggcctcactgtt
ccacccaatacggaagaggaggaattggccgtaaccatggcgacaagtccaggaagcggg
cgttccgtcaccatggagatcttgaagcacctggaaagctctctggagtcagacagccac
acccaggtgctccaggggctgaggctgctggctctgactctccccgagctggaggctcct
ctctggggcttggtgatcaggcgagtcctgaggcctctggaggggttggtcctagaaggc
cgcggaggaggagtcacacaacctctcatggacgtcctactggctacatacaggtccggg
ccgtgtgactccagactcgtctctctgatggcgtccatgttgaactcccagaatccctcc
gacgctgcgctgtgtgctgctgccaccctccgtctgaagacctgccctccagacctcaga
cagaaggctgtcgctgttctactgggacctctacagatggttactggagtaactctactg
gacaggcccaatgacagacacgctgatcaacagactgaccacagacacgctgatcaacag
actgaccacagacacgctgatcaacagactgaccacagacacgctgatcaacagactgac
cacagacacgctgatcaacagactgaccacagacacgctgatcaacagactgaccacaga
cacgctgatcaacagactgaccacagacacgctgatcaacagattgaccacagacacgct
gatcaacagattgaccacagacacgctgatcaacagattgaccacagacacgctgatcaa
cagattgaccacagacacgctgatcaacagattgaccacagacacactgaacagattgac
cacagacacgctgatcaacagattgaccacagacacgctgatcaacagactgaccacaga
cgcattgatcaacagatggaccacagacagactgatgaagataacagacagacggacact
gaccaggacagacagacggagggccgtagctctctctctctccttctggatcatctcaat
cagaaaccctcctgtatctctctgctctgtctgtgtgtgtccagcactccctacataaca
gacatggagtcatctgcctctgtcatccttgctgtggtgtcactcctgaggatctgtaac
ggccactccccctccactgagagcaaggctcctattggctgtagcaaagcctccaccaac
ctgattggctgcagcaaggtccagaggtgtggcctagactccttggctagccttaacacc
tgctctggagctgtggaactggtggtggaggtgttccatgttctactgcagtacctacag
aaccctgactcagaccccaccgtcctccagaagacctaccaggccatgttgaggtggctg
agtgtgtctgcagagccttcctcactggctgatctggtcaatgaagacctcctgcccgtg
ctgaggaagcgtgtgtgtgacgtgcgttgggaggttcgagactccactctagagttcctc
ggccagctgtgtgcgtgtgaggcgttggcctgcactgtcacccctatcctgctgggggcg
ctgtgtgatcaggagagctatgtgagggctagtgccatctctgccctggccaggactcta
ccgctaccactcagcggcctgcagggggaggcagggaaccatacacaggaggaggccgtg
agtcagttactagacatcctctctcaggattcagagggcttcgccagacgtgctgtggtc
cagttcttcatcagctggctaaagacacacccatcatcatcctcctcctcctcctcctcc
tcgctgcgttctgtcctatcgctgggcagcactgacctggactgggaggtcaaagttcac
accctggagctggttgacctcctgatggaggaaacacttccaggtcaccaggagtcagag
ctgtggtcagctcctccccactacggtggctctggagggccaaacctactaacacacact
aaccacacacacccttacgctgtggcgccaaaccagccctcagcccttctcacacacacc
ccgactgacacacacaccccccacacacacgcatctgtagtgtgtggtctgtctaggttg
gtagagctaggtgttgtaacagcgttactgaacggcctgtttgactgtgacagacctgta
gctttaaaagcctgtagtctgttgctacgactacgagacatggtgtgtccccggtcgcta
gggaaaggtgctatgacgactgacgacgccacggcaacagttgccaaggtgacttttgac
ctgaggggtcaggtttgggagcgggaggtcatgaggaagttacaggagaagagaggatct
gattgggttagagagtccagggaagtaggttgtgataggctgaacaggaacagagtttct
gatgggacagacggggctggttccgaagcctgtgatagggtgacaggggagagtgtgtgt
gagggtagtgtgacggtctgtgaggtgctgtggtcgttgggtctggaggagagacagagt
gtgttatctcagagtagtgaccacgtccagaactcacctctctctttactgcaggacata
ctgaacgctacagacacatcacacgctgaggaagttatagtggactgttactga

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