Coregonus clupeaformis (lake whitefish): 121534288
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Entry
121534288 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121534288
04082 Neuroactive ligand signaling
121534288
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121534288
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121534288
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121534288
NCBI-ProteinID:
XP_041696855
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Position
2:complement(31861652..31922679)
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AA seq
451 aa
AA seq
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MRNRDYIFQCLFICLSLTVLWQTRPVIADPTTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVNTDVYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFDGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYVWTSKPADSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKKKEKASA
MKKNNAYAVAVANYEPNITKDSGLSTIAKGSAADPNMAVGKVGPKKTFNSVSKIDRISRI
MFPVLFSSFNLVYWATYLNREPYIKDMVPST
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatagagactacatttttcaatgtctgttcatctgcctctccttgacggtcctc
tggcaaacgaggccggtcattgctgatcctacaacagatgccttcaagaacaacatcact
ctcttcacacggatccttgacagacttctagatggctatgataatcgccttcgacccggc
cttggggatcgtgtaacagaggtgaataccgatgtctacgtcaccagctttggcccagtt
tcagatacagacatggaatacacgatagatgtgttcttccggcaaagctggaaagacgag
aggttgaaattcgatgggcccatgaacatactgcggctgaacaacttgatggccagtaaa
atatggactccggacacattcttccataacgggaagaagtcggtggctcacaacatgacc
atgcccaataaactactgaggattcaagacgatggcaccctgctttacaccatgaggttg
acagttcacgcggagtgtcctatgcatctggaagatttccccatggacttccactcatgt
cccctgaagtttggcagctatgcctatacaatgtcagaggtgacttacgtctggaccagt
aagcctgccgactcggtggtggtggaaggagagagctcccgtttgaaccagtacgacctg
ctcggccaaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatg
acggcacatttccatttgaagcggaagattggctactttgtgatccagacctatctacca
tgcatcatgaccgtcatcctctcccaagtgtccttctggctgaacagagagtcggtgcca
gctaggactgtgtttggtgtaaccactgtgctgacaatgaccaccctgagtataagtgct
cgtaactccctccccaaggtggcctacgccacggccatggactggttcatcgctgtctgc
tacgccttcgtcttctccgccctcattgagtttgccaccgtcaactacttcaccaagcgc
ggctgggcctgggatgggaagagcattgtgaatgacaagaaaaaagagaaggcctccgcc
atgaagaagaacaacgcgtacgccgtggcggtggccaactatgagcccaacatcaccaaa
gactctggtttgtccaccatcgccaagggcagcgccgctgaccccaacatggcggttggc
aaggtgggcccaaagaagactttcaacagtgtgagcaaaatcgataggatttcgaggatt
atgttcccggtcctgtttagcagcttcaacttagtctactgggccacatacttaaacaga
gaaccttatataaaggatatggtgccctcaacatag
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