Coregonus clupeaformis (lake whitefish): 121534318
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Entry
121534318 CDS
T08357
Symbol
zfyve27
Name
(RefSeq) protrudin isoform X1
KO
K19368
protrudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121534318 (zfyve27)
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Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_2
DUF639
RHD_RETREG1-3
IBR
Motif
Other DBs
NCBI-GeneID:
121534318
NCBI-ProteinID:
XP_041696901
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Position
20:54411508..54426407
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AA seq
435 aa
AA seq
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MKPGVGVCQDPCQGGSGAGDRGDDTLVSLPPKDTPGSPTGSPSELGSPGPRQVATFDLLN
MVVSYKRMALFLEPLTDALELARYLLGWRMPLCSLLVCVLLNILFLTLSEVGWFSVCVLG
VSAPAAMGYLQDRCGGGASEAEQQKRRRHAVHRKDLQNVQLTRQDAMMEVKDLLKQLDDL
LSHACLSAESAYKLLYWERHSESSRFYGGMLAVLMLLYFVPVGWVLACLTTALFLWNRDF
CRVVLDLREVFQSGQNPSSEGQTDHTEPDHGSLDRTPTPTSLEDLSPGSVEEAEEAEPDD
EFKDAIESTQEPPISLQDTPLALVEDDDVTSDVDTISITSDNGLLSRNEPIRSKVSKLTE
KLRKRYPTNNTGNCSSCSAVFSVVKRRRSCSNCGNSFCSRCCSYKVLKSCMGVTAPDAQR
ETVFVCAACNSSLSK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctggagtaggggtgtgtcaggacccctgtcagggtggatcgggggcgggtgac
aggggggatgacaccctggtgtctctcccccctaaagacacccccggttcccccacgggg
tcaccctcagagctgggcagccctggcccccgccaggtcgcgacctttgacctactcaac
atggtggtgtcgtacaagaggatggccctgtttctggagccgctcactgacgcgttggag
ctggcccgctacctactggggtggaggatgcctctgtgctcactactggtctgtgtactg
ctcaacatcctcttcctcactctgagtgaagtggggtggttctctgtgtgtgttctgggg
gtgtcggccccggctgccatgggttacctgcaggacaggtgtgggggcggggcgtcggag
gcagaacaacagaagaggcggcgccacgcggtgcatcgtaaggacctgcagaacgttcag
ctcaccagacaggacgccatgatggaagtcaaagacctgttaaagcagctagatgacctg
ttgtctcatgcctgcctgtctgctgagtctgcatacaagctcctgtactgggagagacac
tctgagtcctctaggttctatggtggtatgttagctgtattgatgctgctgtattttgtt
cctgtgggctgggtgctggcctgtctcactactgccctcttcctgtggaacagagacttc
tgcagagtcgtgttggacctcagggaggtattccagtctggccagaacccttcctcagag
ggacagacagaccacacagaaccggaccacggcagcctggaccggactcccactcctacc
agcctggaggacctgtccccgggaagcgtagaggaggctgaggaggcggagcctgatgat
gagttcaaagatgccatcgagtcgactcaggagccccctatctccctgcaggacaccccc
ttggctttagtggaggatgatgacgtaacttcagatgtcgacaccatctccatcacctca
gacaacggtctgctgagccgcaacgagccaatccgcagtaaggtgtccaaactgacggag
aagctacgcaaacgctaccccaccaacaacacaggcaactgttctagctgcagtgcagtc
ttctcagtggtgaagagaaggcggagctgtagtaactgcggcaacagcttctgctccaga
tgctgctcctacaaggtcctcaagtcctgcatgggtgtcacagctccagatgcccagaga
gagacagtgtttgtttgtgcagcctgcaactcctccctcagcaagtga
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