Coregonus clupeaformis (lake whitefish): 121534347
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Entry
121534347 CDS
T08357
Symbol
si:ch211-286b5.4
Name
(RefSeq) afadin- and alpha-actinin-binding protein
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121534347 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121534347 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121534347 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121534347 (si:ch211-286b5.4)
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
121534347
NCBI-ProteinID:
XP_045067663
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Position
38:complement(3938850..3948114)
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AA seq
334 aa
AA seq
DB search
MELLNPVPRGQVKSDRPARTNGRKEETALRVMLERREAELREAMKLRHKLTTLLHTLRAD
MERTLLDTVGDQEEDPNDDKMLVQSEESLGDHVTGGVVHGWKGVQRRLGNLLSQGHVAVG
TDQDKLLAQLETELDQSQQLVKLQQHLLQDSVITPVPAALTDCYFLEEWERLQDRWAELE
LQKRSFQRERRAFTDAAIRLGHERCEFEQQRACVVKQQYLFDCPLWKTLQRHNSRESTVL
NLSGSDHMILSGCRPATPSSAESGFMPWLGSSGSRQGHGRVKVHTPSTPELYSALQLPYS
CRSSESDAQSECLDVGAERLQFAPPGPRLDWSFQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaactgttgaacccagtgcccagaggccaggtgaagagcgaccgaccagccaggacc
aacggaaggaaggaggagacggcgctacgtgtgatgctggagcggcgagaggcggagtta
agggaggccatgaagctccgacacaaactcaccactctactgcacacgctcagagcagac
atggaacggaccttattggacactgtaggtgaccaggaagaggaccctaacgacgacaag
atgctggtccaatcagaggagtccctgggcgaccatgtgacagggggtgtggtccatgga
tggaagggtgtgcagaggagactagggaaccttctgagtcagggtcacgtggctgtgggg
actgaccaggataagctcttggctcagctagagacagagttggatcagagtcaacagctg
gtcaaactgcagcagcatctactacaggacagtgtgatcactccggtcccggccgctctg
acagactgctacttcctggaagagtgggagcggcttcaggaccgctgggcggagctagaa
ctccagaagcggagcttccagagggagagacgggccttcaccgacgccgccatccgattg
ggccacgagaggtgtgagtttgagcagcagagggcctgtgtggtgaagcagcagtatctg
tttgactgtccgttgtggaagacgttgcagcgtcacaacagcagagagagcaccgtcctc
aatctctcaggttctgatcacatgatcctgtccggctgccgcccggccacgccctcctct
gccgagtctgggttcatgccctggttagggtcatcggggtctcggcagggccacggcagg
gtcaaagttcacacccccagcaccccagagctctactctgccctccaactgccctacagc
tgcaggtccagtgagagtgatgcccagtcagagtgcttggatgtgggggcagagaggctc
cagtttgccccccctggtcctcgcctggactggtcatttcagtag
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