Coregonus clupeaformis (lake whitefish): 121534377
Help
Entry
121534377 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121534377
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121534377
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121534377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PspB
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121534377
NCBI-ProteinID:
XP_041696963
LinkDB
All DBs
Position
2:31280001..31353592
Genome browser
AA seq
437 aa
AA seq
DB search
MPKRWTAATPCSYLPVVLLVLVLPRCILSIRADKIISKEDHVSATVNATVLDSKGNPKQI
LTKDDGTYGQNSPKVDAKGIVIAPAPNHGVVDRQGCDPHTRFMVPPRTGHWVALLQRGNC
TFKEKILKASAFNASAVLIYNNNSNEDTVKMGHEGTGDTVAVMITESYGKEILGLLERNL
TVLVSVVVGQRGQAKNINRGSLVFVSVSFIVLMIVSSAWLIFYFIQKIRFTNARDRSQVG
HRRRLGDAAKKAIGKLTTRTVKKGDKETDPDFNHCAVCIEGYQLNDVVRILPCKHVFHKL
CVDPWLNEHCTCPMCKLNILKALGIMPNLPCVDNAGFDMDHRIGRSQTMASQRTALVDLS
SETSISLEPLQRGHPGTGPQIPSESGELTPRSGEINIAVTKEWFIIASFGLLSALTLFYM
IIKATASFSSPDLEWEE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggtggaccgcagcaacgccatgcagctatctccccgtcgtcttgttggtg
ctcgttctgcccaggtgtatactgtcgatccgtgccgacaaaatcatcagcaaggaagac
catgttagtgctacggtcaatgccacggttcttgactccaaaggcaatccaaagcaaatt
ctaaccaaggacgatggcacgtacggccagaattcaccgaaagtggacgcgaagggaatc
gtgattgcacctgcaccgaatcatggagtggtggaccgccagggctgcgacccccacact
cgcttcatggtgcccccccggacggggcactgggtggccctgctgcagcgcggcaactgc
accttcaaggagaagatcctcaaggcctcggccttcaacgcctccgccgtgctcatctac
aacaacaactccaatgaggacaccgtcaagatgggccatgaaggtactggtgacactgtg
gcggtgatgatcaccgagtcgtacggcaaggagatcctgggtctgctggagaggaacttg
acagtgctggtgagtgtggtggtgggccagcgtggccaggccaagaacatcaaccgcggc
tccctggtcttcgtctccgtctccttcatcgtactcatgatcgtctcctctgcctggctc
atcttctacttcatccagaagatacgctttacaaacgcacgtgaccgcagccaggtagga
catagacgtcgacttggagatgcagctaagaaagccatcgggaagctgacaaccaggaca
gtgaagaaaggtgacaaggagacagacccggacttcaaccactgcgctgtgtgcatcgag
ggctaccagctcaacgacgtggtccgcatcctgccctgcaaacatgtcttccataagctg
tgtgtggacccctggctgaacgagcactgtacctgccccatgtgtaaactgaacatcctc
aaagctctgggcatcatgcccaacctgccgtgcgtggacaacgccggctttgacatggac
cacaggatagggcgcagccagacgatggccagccagcggacggccctggtggacctgtcc
agtgagacgtccatcagcctggagcccctgcaacgaggccaccccggtaccggaccccag
atcccctccgagagcggagagctcaccccccgctccggagagatcaacatcgccgtcacc
aaggagtggtttataatcgccagcttcggccttctcagcgctctcacattgttctatatg
atcatcaaggccactgccagcttctccagccctgacctggagtgggaggagtga
DBGET
integrated database retrieval system
