Coregonus clupeaformis (lake whitefish): 121534465
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Entry
121534465 CDS
T08357
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121534465
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121534465
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Homeodomain
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Zn_SUZ12
TMEM132_C
zf-met
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
121534465
NCBI-ProteinID:
XP_041696992
LinkDB
All DBs
Position
21:55072429..55165686
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AA seq
1079 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNSNNVVEAQSDSDDEDKLHIVEEDPDGDSTVPEDTSAVL
PQNGTETHQDTWDGVKEECGSEEEEEEEEEEEEEEGKDALVEEMLQQGDTAVIYPEAPDD
KQKSTPERGVPEKNVPGTPDTLSQLLTCPYCSRGYKRYTALKDHIKLRHEKSEDSFSCSQ
CSYTFTYRTQLDCHMTQHKDPVQRHVPQTTTTTTTTTGGNRKFKCTECSKAFKYKHHLKE
HLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGTPRPVIKVSNQTPSQTQ
PSGPTAAPVRVLLRGEKTDGKPLQEQLPHNQIKSEPVDYECKPVAVAPNGAAGTNGTVFN
GGVVLPQGMALPQGMVQAVVLPTMGLMSPISINLSDLQNVLKVAMDGNVLRQVLGTANGL
VTSKQGFVTQAGQQVISAISLPGFVDQDGTTKIIINYSLEPSPAQQPTAPQLLKKEAPPP
TTNTASTTNTQPASKVTEKLPQDLSIDKTEPTDSECESEKEKEKEMETEETETEAEQTEA
ETPKAQTGKTGCLLCDNCPGDLDALHMLQHCKPANGEGGDDGPLDPSIAALLAEAGITPG
QHPLKNLLSLLKAYFALNAEPTEEELAKISDKISLPVDVVKKWFEKMRSGQITVGPPGSS
PDDSGLSDPSTETQVAQEKSGTEIEEQPASAQTQEISSSQPPSSSPASTSLSPSVSASAP
SPLNLSSSGPVIVKTEDDSEREAQDLPLDLSLPKQPQSQPQVPHVPQEQPLNLTCLKETL
QPQAQLPGFQGTTNTIYVTSSPQTAISSPVNIMSTQLVAITNQGTGTTKRTILIPQLTYT
YTTTAAGSGAAGAQKTVILNGCQEEKSATSSEEQNNSDSSPPQKKMRRLESGMYACDLCD
KIFQKSSSLLRHKYEHTGKRPHECGICDKAFKHKHHLIEHTRLHSGEKPYRCDKCGKCFS
HSGSYSQHMNHRYSYCKKEPQGGRQGGRQLGMSPEMSPQTEEQQSDSRPTSPPSQLDSDE
RESEEELEEEEEEEEEEGMAAMSMDDIRVVQVGEDDEESEIYEVEEFREERKEEEEEED
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggccaacccgaggaggaataacgta
acgaattccaacaatgttgtggaggcccagtccgactctgatgacgaggacaagctacac
atagtggaggaagaccctgatggagacagcaccgtgccagaagacacctcagcagtatta
ccccagaacgggacagagacgcaccaagacacctgggatggagtgaaggaggagtgtggc
tcagaagaggaggaggaggaggaggaggaggaggaagaggaggagggaaaggatgctctg
gtagaggagatgctccagcagggagacacggcggtcatctaccccgaggctccagatgac
aaacagaaaagcacgcctgagagaggggtcccagagaagaacgtcccaggcacgccagac
accctctctcagctcctgacctgtccgtactgctcacggggctacaagcgctacacggcc
ctgaaggaccacatcaagctacggcacgagaagagcgaggacagcttcagctgctcccag
tgcagctacaccttcacctaccgtacacagctggattgtcatatgacccaacacaaggat
cctgtacagcgtcatgtaccccagaccaccaccaccaccaccacaacaacaggggggaac
aggaagttcaagtgtactgagtgttccaaggcttttaaatataagcaccacctgaaggag
caccttcgcatccacagcggagagaagccatacgagtgccccaactgtaagaagcgtttt
tcccactcagggtcctacagctcccacatcagcagtaagaaatgtgttggcatggtgcct
gtcaacggcaccccccgcccagtcatcaaggtctccaaccagacccccagccagacccag
ccctctggccccaccgcggcccccgtccgagtgctcctccggggggagaagacagacggc
aagcccctgcaggagcagctcccccacaaccagataaaatctgagccagtggactatgag
tgcaagccggtggcggtggctcctaacggggcggcggggactaacgggacggtgtttaac
ggcggcgtggtgctaccccagggcatggcgttgcctcagggcatggtccaggcggtggta
ctgcccaccatgggtctaatgtctccaatcagtattaacctcagcgacctgcagaacgtg
ctcaaggtggccatggatgggaatgtgctgcgtcaggtgctggggacggccaacgggctg
gtgacctccaagcaggggtttgtgacacaggctgggcagcaggtcatctcagccatcagc
ctgcctggcttcgtcgaccaggacggaaccaccaagatcatcattaactacagcctggag
ccaagcccagcccaacagcccaccgcccctcagctcctcaagaaggaggctccccctccc
accaccaacaccgccagtaccacaaacacacagccagcctccaaagtaacagagaaactc
ccccaggacctaagcatcgacaagaccgagccgaccgactcggagtgcgagtctgagaag
gagaaggagaaagagatggagacggaggagacagagactgaagcagagcagactgaagct
gagacaccaaaagcccagacaggcaagacagggtgtctgctgtgtgacaactgtcctggt
gatttggatgcactgcacatgctccagcattgtaaacctgccaatggggagggaggtgac
gacggccccctcgacccctccatcgccgccctcctggccgaggcagggataacaccaggc
cagcaccctctaaagaacctactctccctcctcaaggcctacttcgccttaaacgcagag
cccaccgaggaagagctggccaagatctctgacaaaatcagcctgcccgtggacgtggtc
aagaagtggtttgagaaaatgcggtctggtcagatcacggtcggaccccctggttcctct
ccagatgactctggactttcagatcccagcacagagacccaggttgcccaagagaagagt
gggacagagatagaggagcagcctgcctcagcccaaacacaggagatatcatcttcccaa
cctcccagcagttcccctgcctcgacctccttgtccccctcggtctcagcctcggccccc
tcaccactaaacctctcctccagcggcccggtcatcgtgaagactgaggacgactcggag
cgcgaggctcaagatcttcccctggacctgtcccttcccaaacagccccagtcacagccc
caggtcccccatgtcccccaggagcagcccctcaacctcacctgcctgaaggagacactc
cagccccaagcgcagctcccaggcttccagggaaccaccaacaccatctacgtcacctcc
tccccccaaactgccatttccagcccagtgaacatcatgagcacccagctagtagccatc
accaaccagggcaccggcaccaccaaacggactatcctcatcccccagctcacctataca
tacactactacagcagcaggcagtggcgccgccggggcccagaagaccgtcatactcaac
ggctgccaggaggagaagtctgccaccagctcagaggagcagaacaactcggactcttcc
cctccgcagaagaagatgcgtcggctagagagcgggatgtacgcctgtgacctgtgtgac
aagatcttccagaagagcagctccctgctcaggcataaatacgaacacacaggaaaacgg
ccacatgagtgcggcatctgcgacaaagccttcaaacacaagcaccacttgatagaacac
acgagactgcactccggagagaagccctaccgctgtgacaagtgtggcaagtgtttctcc
cactcgggctcctacagccagcacatgaaccaccgatactcctactgcaagaaggagccc
cagggagggcggcaggggggacgtcagctcggcatgagccctgaaatgagcccccaaaca
gaggagcagcagtcagacagccgtcccacctccccaccttcccaactggactcagacgag
agggagagtgaggaagagctggaggaagaggaggaggaagaggaggaggagggcatggcg
gccatgagcatggacgacatacgggtggtgcaagtcggtgaggatgacgaggagagtgag
atctacgaggtggaggagtttagggaggagaggaaagaggaggaggaagaggaggattga
DBGET
integrated database retrieval system
