Coregonus clupeaformis (lake whitefish): 121534468
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Entry
121534468 CDS
T08357
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121534468
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121534468
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
ig
Ig_2
LRR_EndoS
V-set
LRR_9
LRRNT
LRR_Zer-1
Ig_6
Receptor_2B4
Big_6
DUF7617
Motif
Other DBs
NCBI-GeneID:
121534468
NCBI-ProteinID:
XP_041696998
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All DBs
Position
2:30491060..30900212
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AA seq
614 aa
AA seq
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MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEELDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPLGVFTGLSNLTRLDVSDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLETLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLHAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHGLNLTTLFITNNNLSTFPYQALKHLHYLTHLNLSFNRIRHIEGRM
LSELVRLRELHLVGAQLSTIEPYAFQGLRWLKVLNVSHNHLDTLEKGVFQSSEALEVLLI
DHNPLVCDCRLMWILQKRQSIYFGDSQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQPAKLHCSAEGTPRPVVSWLSPRRRLLTNKSHGRVTVHNNGTLEIKA
AEVQDGGVYLCMATNTAGNDSLMASLAVKSLASLYANRTQYYTDPINATTNGTINVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYIPRSKSNGTSIDGGA
EGQAGPRRFNMIMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagtaaagtcatgctgcacacggccctctcatgctggcagccgttc
ctgggactggctctcgtggccgtcttcgtgggttccgccctgggatgtcccgcccgctgc
gactgctcggcccagagcaagtcggtcctgtgccaccgcaaacgcctaccgagcatccca
gacggcatcccaatcgagaccaggatcctggatctgagcaagaacaagctgcaggctgtc
aacccggatgactttgccccctaccctgggctagaggaattggacctcagtgggaacatt
atcagctatgtagagccgggagcgttcaaccctctgtacagcatgcactcactgagtctc
aaaagcaaccgcatcaagcttattcccctgggcgtcttcacaggcttgtccaacctcacc
cggctggatgtcagcgacaacaagattgtcatcctgctggactacatgttccaggacttg
cacaatctgaagttcctggaggtgggtgacaatgacctagtgtacatctcccaccgggcg
ttcagtggactgctgagcctagagacgctaaccctggagagatgcaacctgacggtggta
cctactgaggccctgtcccacctgcacaacctggtaagacttcacctgcgatacctcagc
atcagcaccttgcatgcctactccttcaagaagctgttccgactgcgccacctggagatt
gacagctggacctcgctggacagtgtgccggccaacacgctacacggcctcaatttgacc
acgcttttcatcaccaacaacaacctgtccaccttcccataccaggcccttaagcacctg
cactacctgacgcacctcaacctgtccttcaaccgcatcagacacatcgaggggaggatg
ctgtcggagttggtgcgcctaagggaactgcatctggtcggggcccagttgtcgaccatt
gaaccatacgcatttcagggcctccggtggctcaaggtcctcaacgtctcccacaaccat
ttggacaccctggagaagggtgtcttccaatcttctgaggctctggaggtcctcttgatc
gaccacaaccccctggtgtgcgactgccgcctcatgtggatcctgcagaagaggcagtcc
atctattttggcgactcgcagccggagtgcagtacccccgagggcatccgcggcaggcct
ttcagggagttcaaggagaccctgctctcctactacgtgacatgcaccaagccaaaaata
cgggagaacaagacgcagacgattgccgtggacgaaggtcagccagcgaaactgcactgc
agtgctgaggggacccccaggccagtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaaaagccatggaagagtcacggtccataacaatgggacgctagagatcaaggcg
gccgaggtgcaggacggcggggtatacctttgcatggcaaccaacactgcgggtaacgac
tcattaatggcctccctagcagtgaaaagcctggcgtcgctctacgcaaacaggacccag
tactacacagatcccatcaatgccactaccaatgggactatcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggttgtttcacattcctgggggtggtc
ttgttctgcttcctgctcctgttcgtttggagccggggcaaaggaaagcataaaaacaac
atagatattgaatacatccctcgttccaagtctaatggcacctctatagatggaggagca
gaggggcaagctggaccccgtcgttttaacatgataatgatctaa
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