Coregonus clupeaformis (lake whitefish): 121534478
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Entry
121534478 CDS
T08357
Name
(RefSeq) SURP and G-patch domain-containing protein 1
KO
K13096
splicing factor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121534478
Spliceosome [BR:
cclu03041
]
Complex A
Other components
Complex A specific factors
121534478
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GFIT
Motif
Pfam:
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
121534478
NCBI-ProteinID:
XP_045061829
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Position
21:40168766..40175129
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AA seq
654 aa
AA seq
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MESGDTGRGGWNNKFRPAQKNRMSVNILRQEELIAQKKREIEAKMAEQAKKKSLQTPNKP
LPPSLQGHSSNNNKYVNDGSFLQQFMKLQKDKPSSDSGSSSDTKAPSSSTPSPSSGVSQP
QMKSILIGKRPGLGISSMLNQFKNYSQSKKTPLRPQRPSIFSSPDEDDDDEEEVDDSSFL
EIKVFPPEDPDTRLILDKMAAFVAEGGPELERKAKEDYRDNPVFSFLYDNNSRDYLYYRK
RVAELRKDNSKHEMPSRSNVSPPVDEETQRVAEKLAMFVADGGPEVEAIAAQHNQDNPTF
SFLYDLQSPAHRFYKEKVEEYRQAKNAQSPPPTIKQEPGVGLKRPAAPPLTYPPPPPPPH
YPYLVGQVKLEPGLGIKQEAAGPPVVKRKRKSRWGSEDDKVDLSQQPIIIPKEEEPEPSP
CLSVHELRDLGYKKGKPVGLVGVTELSDDQKKQLKEQQEMQEMFDMIMKHKRAMTEMQVM
WEKAVRDHSHEYDSDEEVDQQAGTWEHRLRHMEMEKTREWAESLTDMGKGKHFIGDFLPP
EELEKFMETFKALKEGRDPDYSEYKEFKLTVENLGFQMLMKMGWKEGDGLGSGGQGIKAP
VHRGTTAVDGAGFGVERPAELSGQDDEYDAFRKRMMLAYRFRPNPLNNPRRPYY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagtccggagatacagggagaggaggctggaacaacaagttccggccagcccagaag
aacaggatgagtgtgaacattctccgtcaggaggagcttatcgctcagaagaagcgcgag
atcgaggctaagatggcagagcaggccaagaaaaagagccttcagactcccaacaagcca
ctgccaccaagtttacagggacactcttcgaacaacaacaagtatgtgaatgacggaagc
ttcttacagcagtttatgaagcttcagaaggacaaacccagctctgactctggttccagc
agtgacaccaaagccccgtcgtcatccactcccagtccgtcgtcgggagtgtctcagccc
cagatgaagagcattctcatcggtaagcgccccggtctagggatcagcagcatgctgaac
cagtttaagaactactcccagtccaagaagaccccacttcgcccccaaaggcctagcata
ttcagctccccagatgaagatgatgatgatgaggaggaagttgatgattcgagcttccta
gagatcaaagtctttcccccagaagacccagacacacgacttatcctggacaagatggcg
gcctttgtggctgagggagggcctgagctagagaggaaggccaaggaggactacagggac
aaccctgttttctcattcttgtatgataataacagccgggactatctttattaccgaaag
agagttgctgaactccgaaaggataactcaaaacatgagatgccatcacgttctaatgtc
tcccccccagtggacgaggagacccagagggtggctgagaagctggccatgtttgtggcc
gatggtggccccgaggtggaagccatcgccgcccagcacaaccaggacaaccccaccttc
agttttctatatgacctccaaagccccgcccaccgtttctacaaggagaaggtggaggag
taccgccaggccaaaaatgcccagagcccccctccaacgatcaagcaggagcctggggtg
gggctcaagagaccggccgcccctcccctgacctatcctcccccccctccgccccctcac
tacccctacctggtgggccaagtaaagctagagccaggtctggggataaaacaggaagcg
gcaggtccccccgtggtgaagagaaagaggaagagccgctgggggtcggaggacgacaag
gtggatctgtcgcagcaacccatcatcatccccaaggaggaggagccagagcccagcccg
tgtctctctgttcatgaactgagggatctgggctataagaagggcaagcctgtgggcctg
gtgggagtgactgagctctcagacgaccagaagaaacagctcaaagagcaacaggagatg
caggagatgtttgacatgatcatgaagcataagcgtgcgatgacggagatgcaggtgatg
tgggagaaggcggtgcgggaccactcccacgagtatgacagtgacgaggaggtggaccag
caggctggcacctgggagcaccgcctccgtcacatggagatggagaaaacacgtgagtgg
gcggagtcgctgactgacatgggaaaggggaagcacttcattggtgacttcctacctccg
gaggagctggagaagtttatggagaccttcaaggcactcaaggagggccgtgacccagac
tactctgagtataaggagtttaagctgacggtggagaaccttggtttccagatgctcatg
aagatgggctggaaggagggcgatggtctcggctctggcggacagggcatcaaggctccg
gtccacaggggaaccacggctgttgacggggcagggtttggcgtggaacggcccgctgag
ctctcaggacaggacgatgagtatgacgctttcagaaagaggatgatgctagcctaccgc
ttcaggcctaacccactgaacaacccgaggaggccatactactga
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