Coregonus clupeaformis (lake whitefish): 121534514
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Entry
121534514 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121534514
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121534514
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121534514
Ion channels [BR:
cclu04040
]
Other channels
Mechanosensitive channel (Piezo)
121534514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
121534514
NCBI-ProteinID:
XP_045061985
LinkDB
All DBs
Position
21:complement(45786485..45996905)
Genome browser
AA seq
2977 aa
AA seq
DB search
IKLLICVCVCVSCLFRYNGLSFVYLIYLLLIPLFSEPTSTTMQGHTGRLLMSLCFSSLSF
LLFHIIYQITVNSLLARNSIDPAFNCSTWEKSIRQMGFERVPLHLDPEYPYIWTQSTPTS
GPRVPLHLDSEYPYIWTQINPTSGLRVHAGNGIRVFLPDTGMFLAGLACWLLCRSLFQKR
PLEDMAQDNTDYEPEEEEEEEKLSLDENVLLDEDFEAGYEAGEEEEEEMEEEEEEEEEES
TKMKILRHIAGVASKVKEIIGNLITTAGKGVVTVLLGLTGIMLPSLTHSVYFFVFLFLCT
WWSFCRTFDTLIFSCMCVLMAIFSAGHLVVLYLYQFQFFQESIPSEDSYISLFGISSIIQ
TDCSSTWRLIVNPDLAWHHFLNPIMLLLLYYTLATLIRLWLQEPTEVGNNIETEPIELLS
TQDGYSTSEGLAAKSNGTSYDISTLNSGENRPVCLDLYSTPQYKMDQTNNIKEKKDGGVY
DVSPTLGGETAGMEEEEKEQGDEEEEGKEGRVNAVVTVFRFIMKQSYICALIAMMAWSIT
YVSWLTFVFLMWSCMLWMVRERRRYTMLTSPFMVLYGNLLMVLQYIWSFELLKPVPGLFL
KMDVPFSQLGSKILCLLSFWLLLRQTLTERQEQRREEAVVLTDVHVDDHKTGLQDEEGVE
QDIMQVLGNMVMEMLVKYWIYICGGMFFLVSFEGRMVIYKIIYMMLFLFCVALYQVHYEY
WRRILKYFWMSVVVYTMLVLILVYTFQFDTSPPFWSNMTGMSKVKLGDLGLETFSVPMLF
TRIFIPTSFLLVCILHLHYFHDRFLLLTDLKAVAQKQDSAIYSHAKVNGRVYLIMNRLVH
QDGSLADITMLSISSGEGVIRAEDKKEKKEGTLVVVMEEKDGGRKQKGGLRQSIDLHQSF
NKSFESRQSFGKSFESHQSFESSAGPGESGHCSVGTEPEPSTENTTSDLKNKWHLVMDRL
TVLFLKFLEYFHKLQLFIWWLLEIHIIKIVSSYIIMVSVKEVTLFNYVFVACWAFALPFS
QFRPRASSICTVWTCVVIVCKMLYQLEFIDPASYSKNCSMPMNYTEKQREEMKDSLLYKE
PVDPSNWVGLKKFNPMLENLRNNLLMLAMLAFQVTVYRHQQYYRLRNKLTAPAARIIFHD
ITRQHLDNGIVNCAKYFINYFFYKFGLETCFLLAVNVIGQRMDFYAMLHAFSLIAVMYRR
RRKAIAEIWPKYCCFLACMLTWQYFLCIGIPPAACKDYPWRFPNSAMDSNVIKWLYFPDF
HTKPNPIFLVYDFMLLLCASLQRSIFDEENKAAVRLMAGDNVEICRDLDAASFSVHNPVP
DFIHCRSYLDMLKVILFSYLFWFVLTIIFITGTTRISIFCLGYLVGCFYFLLFGGELLLK
PIKKILHYWDFLIAYNVFVITMKNILSILACGYINVLVVNNCWLIQLLSLACTIKEYNNC
ILPSDEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIRASQILASRGAELFQATIVKAV
RARLEEENKSMEQLKRQMERIKQRQEKFKRGKKNMLRLAQESGDRDNPIQPQEEKEKMKE
KETAKTKKRRWWRPWVDHASMVRSGDYYLFETDSEDEEEEEEKREDEEPPKKSAFQRAIG
KFASALIALPRSIIKLPQTILQYVIRAAKFVYHAWITDSKAAMKERSKEKRKFWKRYTRR
DKHKKDKKEGEMEEDQDGGQEKKSDGPDNILKRVFNIVKFTWVLFQTMVESFTKWMNNVC
REHIDISTVLRIERCMLTREVKKGNVPSRESIHVFYQKKMRMNMSRGSSLDRLSEEDSAS
GGSHRAHRVRDGYRMESQDSMASLASRDSISSAYTEATMLFSRQDTLDELDGMPSDVPIP
KTSERARPKLRKIYGLDASKSTDSSSSQVSSEATQCITLYSRQGTNDTIEEVEDEQDQGE
DRQHRPWGHPPPEGAEGAEDSPWRGGGDGSGGETTEDQGQGDPWGSPGPGEGPSFRVEEG
ASTLLALRPGSQDCSTDSDDGGVQDRQEYLNTEERDRAEKLYTPDTDAPNTSDADVPPSY
SKAVSFDRLDMSDDESDRDDKRMMVMTPDTSRSDYLDDPRLPSLTTELTASELLLNKMFY
DEELERSDRFYVGQPLAFQLVYALYNMLVAHSEMVCYLVIILNNMLSASCITLVLPILIF
LWAMLSVPRPSKRFWMTAIVYTEVTIVIKYFFQFGFFPFNQNLMVDGNRPYHPPNIIGVE
KKDGYVVYDLIQLLALFFHRSILKCHGLWDEDNLKDTKKEILRRDTESEEDERREREATP
VPSTPRERKGSTQTLRSINLGMGTSMDSVHYLQQQQQTYQRRKSSSGGSHISHRSSHSLR
SKRGSTNSRNSSHRDGSESVQQKTKKQLIMEKLREQMIKAKTFTIKRTMEVYLPVRQFFY
DLVHPEYSAVTDVYVLMFLADTVDFIIIVFGFSAFGKHSAGADITSSLSEDQVPGAFLVM
VLIQFGTMVVDRALYLKKTVLGKVIFQVVLVFGIHFWMFFILPGLSERRFNENTVAKLWY
FIKCIYFGLSAYQIRCGYPTRVLGNFLTKSYNYANLFLFQGFRLIPFLTELRAVMDWVWT
DTSLSLSSWICVEDIYAHIFVLKCWRESERRYPQPRGQAKKPVVKYGMGGMIVMLLICII
WFPLLFMSLVKSVVGVVNKPLDVSFSITLAGFQPIFTMSAQQNQLKEVSSRDFHGTFMRS
YQLYPKAMQWLESYMPEDLTIAELEGSSNSLWTISPPSRTNIMEMLNSKEQFPITVAWSV
QRNQTLGAKAEFATGKQVMYLDVKTKLELIQLLNGTRRDGVVIKHVFPRYIRAPTDSEAK
PIEQLCTEKVYITLALERSQNDSAEVQEWWIVNQTIPGRLNVRSPKHLYDAGLELYVFSD
QVSPPSLGFLAGYGIMGLYASVVLVIGKFVREFFSGISHTIMFEELPNVDRILKLCTDIF
LVRETGELDLEEDMYAKLIFLYRSPETMIKWTREKTQ
NT seq
8934 nt
NT seq
+upstream
nt +downstream
nt
attaaattactaatctgtgtgtgtgtgtgtgtgtcttgtttgttccggtacaatgggcta
tcattcgtctacctcatctacctcctcctcatccccctcttctctgagcccaccagcaca
accatgcagggccacacggggcgcctgctcatgtccctgtgcttcagcagtctcagcttc
ctgctcttccacatcatctatcagatcactgtcaacagtctactggccaggaacagcata
gaccccgccttcaactgttccacgtgggagaaatctatacggcagatgggcttcgaaaga
gtacccctacatctggacccagagtacccctacatctggactcagagtacccctacatct
ggacccagagtacccctacatctggactcagagtacccctacatctggacccagattaac
cctacatctggactcagagtgcatgcagggaacggtatccgcgtgttcctccctgacaca
gggatgtttctagcagggctggcctgctggctgctgtgtcgtagtctgtttcagaagaga
ccgctagaggacatggcccaggacaacactgactacgaaccggaggaagaggaggaagag
gagaagttgagccttgatgagaacgtcctgttggatgaggactttgaggctgggtacgag
gctggagaagaagaggaggaagagatggaggaggaagaggaagaggaggaggaggagagc
accaagatgaagattctgcgtcacattgcgggcgtggcgtccaaagtgaaggagatcatt
gggaatctgataaccaccgcaggaaaaggggtggttactgtactgttaggactcacaggt
atcatgctgccctccctgacacattcagtctactttttcgtgttcctgttcctgtgtacg
tggtggtcattctgccggaccttcgacaccctcatcttcagctgtatgtgtgtcctcatg
gccatattcagcgctggacacctggtcgtcctctacctctatcagttccagttcttccaa
gagagcatcccttcagaggacagctacatcagtctgttcggcatctcatccatcatccag
actgactgttcctctacctggaggttgatagttaaccctgacctggcctggcaccacttc
ctgaaccccatcatgctgctgctgctgtactacaccctggccacgctcatacgcctctgg
ctccaggaacccacagaggtagggaacaacatagagacagaacccatagagctgctttct
acccaggatggctacagtacatctgaggggttggctgcaaagtccaacgggacgtcttat
gacatctccaccctaaactcgggggagaatagaccggtctgtctggacctgtactccacc
ccacagtataaaatggaccaaaccaataacatcaaagagaagaaggatggaggtgtgtac
gatgtcagtccaaccctgggaggagagactgctgggatggaggaggaggagaaggaacag
ggggatgaggaggaagaggggaaggagggcagagtgaatgctgttgtaacagtgttcagg
ttcattatgaagcagagctatatctgtgctctcatagccatgatggcgtggagcatcacg
tatgttagctggctgacgtttgtgttcctgatgtggtcgtgtatgttgtggatggtgagg
gagcgtcgtcgctacaccatgctaacctctcccttcatggtgctgtatgggaacctgctg
atggtgctgcagtacatctggagctttgagcttctaaagccagtacctggcctcttcctc
aagatggacgtgcccttcagccaactgggttccaagatcctgtgtctgttgagcttctgg
ctgctgctgagacagactctgacagagagacaggagcagcggagagaggaggctgttgta
ctcactgatgtacatgtggatgaccataaaacaggtcttcaggatgaggagggagtggag
caggacatcatgcaggttctggggaacatggtgatggagatgctggtgaaatactggatc
tatatctgtggaggaatgttcttcctcgtcagcttcgagggacgcatggtcatctacaag
atcatctacatgatgctattcctcttctgtgtggcgctctatcaggtgcactatgagtat
tggaggaggatcctgaagtacttctggatgtctgtggtggtctacaccatgctggtcctc
atcctggtctacacctttcagtttgacacctccccacccttctggtctaacatgactgga
atgagcaaagtgaaactgggggacctggggttagagacgttctctgtaccgatgctcttc
acacgtatcttcatccccacctccttcctcctagtgtgtatcctccatcttcactacttc
cacgaccgcttcctcctgctcactgacctgaaggctgtggcccaaaaacaggacagcgcc
atctacagtcatgctaaagtcaatggtcgtgtgtatctgatcatgaatagactggtacac
caggatggaagcctggctgacatcaccatgctcagcatctcttctggagaaggagtgata
cgagcggaggacaagaaagagaagaaggagggaaccctggtggtggtgatggaggagaag
gatggagggaggaagcagaaaggaggactccgtcagtctatagacctgcatcagtccttc
aacaagtcatttgagtcccgtcagtcgttcggaaagtcttttgagtcgcatcagtcgttt
gagtccagtgcagggccaggggagagtggccactgcagtgtgggaactgagccagagccc
tccacagaaaacactacctcagatctaaagaataagtggcacctggtgatggaccgtctg
actgtgctgttcctcaagttcctggaatacttccacaagctgcagctcttcatctggtgg
ctcctggagatacacatcatcaagatcgtctcttcatacatcataatggtctccgttaag
gaggtgacgttgttcaactacgtgttcgtggcgtgctgggccttcgctctgcccttcagt
cagttcagaccccgggcctccagtatctgtactgtctggacctgtgttgtcatcgtctgt
aagatgttgtaccagctggaatttatagaccctgcctcttactctaagaactgctccatg
ccgatgaattacacagagaaacagagagaagagatgaaagactctctgctgtacaaggag
ccagtagacccgtccaactgggtcggactcaagaagttcaaccctatgctggagaacctc
aggaacaacctcctgatgttggccatgctggcgtttcaggtgaccgtctaccgtcaccag
cagtactaccggctgaggaacaagctcaccgcgcccgccgctcgcatcatcttccatgac
atcacgcggcaacacctcgacaacggcatcgtcaactgtgccaagtacttcatcaactac
ttcttctacaagttcgggctggagacgtgcttcctactggcggtgaatgtgattggccag
cgtatggacttctatgctatgctgcatgccttctctctgatagccgtgatgtatagacgg
aggaggaaagctatagctgagatctggcctaaatactgttgtttcctggcctgtatgcta
acctggcagtacttcctgtgtatcgggatacctcctgcagcttgcaaagactacccatgg
cggttccctaactctgcaatggactccaacgtcatcaagtggctatatttccctgacttc
cacaccaaacccaacccaatctttcttgtctatgacttcatgctcctcctctgcgcctca
ctccagaggagtatatttgacgaggagaacaaggcagctgtccgtctcatggctggagac
aacgtggagatctgtagagacctagatgcagcctccttcagcgtccacaaccctgtccct
gacttcatacactgcaggtcctacctggacatgctgaaggtgatcttgtttagctacctg
ttctggtttgtcctcaccatcatcttcatcactggcaccacacgtatcagcatcttctgt
ttgggctatctggtgggatgtttctacttcctgctgttcggcggggagctgctgctcaag
ccaatcaaaaagatcctccactactgggacttcctgatcgcctataatgtgtttgtcatc
accatgaagaacatcctgtctatcctggcctgtggttacatcaatgtcctggtagtgaac
aactgttggctgatccagctcctcagtctggcctgcaccatcaaggagtataacaactgt
attctgcccagcgacgaggctgggatcatctgggacagtatctgttttgccttcctgctg
ttgcagagacgtgtcttcatgagttactactttctacacgtggtggctgacatcagggcc
tcccagatactggcatccagaggggctgagttgttccaggctactatagtgaaggcagtc
agagccagattggaggaagagaacaagtctatggaacagctgaagagacagatggaacgt
ataaagcagcgccaggagaagtttaagagggggaagaaaaatatgttgaggctagctcag
gagtcaggagaccgagacaaccccatccagcctcaggaagagaaagagaaaatgaaagag
aaagaaacagccaagactaaaaaaaggcggtggtggcggccttgggttgaccacgcctcc
atggtgagaagtggagattattatttgtttgaaactgacagtgaagacgaggaggaagag
gaggagaaaagagaggatgaagagccgcccaagaagtctgcatttcagcgagctattggg
aagtttgcctcagcccttatagctctgcccagatctatcattaaactgccccaaaccatc
cttcagtatgtaatcagggcagccaagtttgtctaccatgcgtggataacagactccaag
gcagccatgaaggaacgaagcaaagagaagcgtaagttctggaagaggtacaccaggaga
gacaaacacaagaaggacaagaaggaaggagagatggaggaggatcaggatggaggacag
gagaagaagtctgacggaccagacaacatcctgaagcgagtgttcaacatcgtcaagttc
acctgggtgttgttccagaccatggtggagagcttcaccaagtggatgaacaacgtgtgt
agagagcacatagacatctccaccgtgctgcgcattgagagatgcatgctcactagagag
gtcaaaaagggtaacgtcccgtccagagagagtatccatgtgttctaccagaagaagatg
cgtatgaacatgtctcgggggtccagtctggaccggctcagtgaggaggacagtgcgtcg
ggggggtctcacagggcccacagggtgagagacggctatcgcatggagagccaggacagc
atggcatctttggcatcacgagacagcatatccagtgcctacactgaggccaccatgctg
ttctcccgccaagacacgctggacgagctggacggaatgccgtcagacgttcccattccc
aaaaccagtgaacgtgcccggcccaaactccgtaagatttacggcctggacgcctccaaa
tcaactgacagcagcagcagccaagtgtccagcgaggcgacccagtgcatcactctgtac
tcccggcagggcaccaacgacaccatcgaggaggtggaggacgaacaggaccagggggaa
gacaggcagcacagaccctggggacacccacctccggagggggcagagggggccgaggac
agcccctggcggggtggaggagatggcagtggtggagagaccacagaggaccagggccag
ggggatccatgggggtctccaggcccaggggagggcccctccttcagggtagaggaagga
gcatcgaccctcctggccctccgaccagggtcccaggactgtagcactgacagtgacgac
gggggtgtccaggaccggcaagaatacctgaatacagaagagcgtgaccgggcggagaag
ctgtacaccccagacacggacgctccaaacacctcggacgctgatgtgcctcccagctac
agcaaggcggtgagcttcgaccgcctggacatgagtgatgatgagagcgacagggacgat
aagaggatgatggtgatgacacctgacaccagccggtcagactatctggacgacccccgg
ctgccctcactgaccactgagctgaccgccagcgaactgctgctcaacaagatgttctat
gatgaggagctagagcgttcagaccggttctacgtgggccagccactggcgttccagttg
gtctatgccctgtacaacatgctggtggcccactctgagatggtgtgttacctggtcatc
atcctcaacaacatgctgtcagcctcctgcatcaccctggtcctccccatcctcatcttc
ctctgggccatgctgtcggtgcctagacccagtaagaggttctggatgaccgccatcgtt
tacaccgaggtcaccatcgtcatcaagtacttcttccagtttggcttctttcccttcaac
cagaacctaatggtggatgggaatagaccctatcaccctcccaacatcatcggagtggag
aagaaagatggatacgtcgtctatgacctcatacagcttctggcgctcttcttccacagg
tccatcctgaagtgtcatggtctctgggacgaagacaaccttaaggacaccaagaaggag
attctccggcgggacactgagtcagaggaggacgagaggagggagagggaggccactccc
gtcccctccaccccccgcgagaggaagggctccacccagaccctcaggtccataaacctg
ggcatgggcacctccatggactctgtgcattacctccagcaacagcagcagacctaccag
agaaggaagagctccagcggagggtctcatatctcccaccgctcgagccactctctacgc
tccaagagaggcagcactaactccaggaacagtagccatagagacgggagtgagtcagtg
cagcagaagactaagaaacagctgatcatggagaaactcagagaacagatgatcaaagcc
aagaccttcactatcaagaggaccatggaggtctacctccctgtacgtcagttcttctac
gacttggtccatccagagtacagcgctgtgacagacgtctatgtcctcatgttcctggcc
gacaccgttgacttcatcatcatcgtcttcggcttctccgcttttgggaaacactcggcg
ggagcagacatcacgtcgtccctgtcggaggaccaggttcccggagccttcctggtgatg
gttctgatccagtttgggacaatggtggtggaccgggccctgtacctcaagaagacagtg
ctggggaaggtcatcttccaggtggtcctggtattcgggatacacttctggatgttcttc
atcctgcccggactctctgagaggcgtttcaatgagaacacagtggccaagctgtggtac
tttatcaagtgtatctactttgggctgtcagcctatcagatccgctgtggctaccccacc
agagtcctgggtaacttcctcaccaagagctacaactacgccaacctcttcctgtttcaa
gggttccgtctgatcccgttcctgactgagctgcgtgcagtgatggactgggtctggacc
gacacctccctgtccttatcctcctggatctgtgtggaagacatctacgcacacatcttc
gtcctcaagtgctggagggagtcagagaggaggtacccccagccgcggggccaagctaag
aagccggtggtgaagtatgggatgggagggatgatcgtcatgcttctcatctgtatcatc
tggttccctctactcttcatgtctctggtcaagtctgtggtgggggtggtcaacaaacca
ctggacgtctccttctccatcaccctggcagggttccagcccatcttcaccatgagtgct
cagcagaaccagctcaaagaagtctccagccgtgacttccatggcacctttatgaggtca
taccagctctaccctaaagcgatgcagtggttggagtcctacatgccagaggacctgacc
atagctgagttggagggcagctctaacagtctgtggaccatcagtcctcccagtagaact
aacatcatggagatgctcaactccaaggaacagttccccatcactgtagcttggtctgtc
cagcggaaccagactctgggagcgaaggctgagtttgctacggggaagcaggtgatgtat
ctggatgttaagaccaaactggagctgatccaactgctcaatgggaccagaagagatgga
gtggtgataaaacatgtgttccctcggtatatccgggcccctactgattctgaggccaaa
cccatagaacagctgtgtaccgagaaagtatacatcactttggcgttggagcgttcccag
aacgactcagcggaggtccaggagtggtggatcgtgaaccagacaattccgggaaggctc
aacgttcgtagccccaagcacctgtacgacgctggactggagctctatgtcttcagcgac
caggtcagccctcctagtctgggcttcctggctggatacgggatcatgggtctttatgcc
tctgtggtgctcgtcatcggtaagttcgtccgtgagttcttcagcggtatatcccacacc
ataatgttcgaggagctgcccaacgtggaccgcatcctgaagctgtgtaccgacatcttc
ctggtccgagagacgggagagctggacctggaggaagacatgtacgccaaactcatcttc
ctctatcgctcgcctgagactatgatcaaatggaccagggaaaagactcagtga
DBGET
integrated database retrieval system
