Coregonus clupeaformis (lake whitefish): 121534552
Help
Entry
121534552 CDS
T08357
Symbol
si:dkey-181m9.8
Name
(RefSeq) uncharacterized protein si:dkey-181m9.8
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04217
Necroptosis
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121534552 (si:dkey-181m9.8)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121534552 (si:dkey-181m9.8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121534552 (si:dkey-181m9.8)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121534552 (si:dkey-181m9.8)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121534552 (si:dkey-181m9.8)
Multi subunit type E3
LUBAC complex
121534552 (si:dkey-181m9.8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
E3_UbLigase_RBR
IBR_1
IBR
RRM_PARP14_1
NID
RRM_PARP14_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
121534552
NCBI-ProteinID:
XP_041697063
LinkDB
All DBs
Position
21
Genome browser
AA seq
878 aa
AA seq
DB search
MPRVPADLEYETLTECKYSFPVEVVSDIKNATATNGDLRMYVDFYCFPNKEKKKLVYLSG
TIPVPHDGNTYNIPVCIWLHETHPQSRPQCYVCPSISMLINPRCPYVEASGQVLLDCLTN
WKSGLANLSLLVSEMRSAFQKETPLFAMHPIRAQMIPTAAHSSAHAESSDPGSWPQPSSS
TPRARRSSMSPTPLPREIAPPKSLKSSQSGPLRESGTGVKRSYTEELLDMGINFGVPGGV
QFPYSSTNPFITTASAPNNTPVSSEDMSNLFKSLQLENIVNVYQLGTKERGQTQGNEDDR
GDGDHPPIPPAVTPLVDNQHRILVSRLPSDQSPSRVKNKLTLYFQRRSNGGGEVLDVTYP
YPPTHPDQALVTFRSPRDAEQVLLQADRIVTVNERPCLIQLKRFNCAQIAVPPGVSGDKA
AIFHSLLSLEGRSFSQADVEEAVQSCRDLPSALKYLSHECPICREQVSFSKIISMTHCPC
AFCESCFKAYFSQAIKEKSIVHVVCPLCGQPDVRQSQGGVEEALDYFSLLDTQIRHYLDP
QIHELFQRKLRDRALQEMPNFRWCAHCSFGLLHEADQLRMDCPSCRKSTCSQCKNAWAPQ
HQGLSCEKFREWQLHNNPEYQTARLENLLSRNKIECPKCKFVFYLSKGGCLHFKCTQCQH
EFCGGCNRPFKLGAGCDFSAECGSKGLHAHHPRDCLYYLRDWNVPRLHKLLQLYRVSLAG
MVKSKEGSTGTNTQGVCAVLEHREMGRDGPCGRPTLPEYSGYCALHYKECLVELINRSHA
DPAVLFDVAEMLAELQRWHIPVPQKNPQEPEALYVQHLRQTLTRMVGLRDNKLPPVKVKD
DLCPLPSSSPAGPRWSSAQSNTPRLFPDDSQLLLLLND
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggtcccagcagaccttgaatatgaaacactgaccgagtgtaaatacagcttc
cctgttgaggttgtcagtgatatcaagaatgctacagcgactaatggagacctgcgtatg
tatgtggacttctactgtttccccaataaggaaaagaagaagttagtttatttgtctggt
actattccagttccacatgacggtaacacgtacaatatccctgtgtgcatctggctccac
gagacacacccccagagccgtccgcagtgctacgtgtgtccctccatctccatgttgatc
aaccccaggtgcccatatgtggaggccagtgggcaggtgctcctcgactgcctcaccaac
tggaagagcgggctggccaacctgtcattgctcgtctcagaaatgaggtctgcatttcaa
aaggaaacgcccctctttgccatgcacccaatcagagctcagatgatacctactgcagca
cactccagtgcacatgcagagtcttcggaccctggcagctggcctcaaccaagcagttct
accccgagagccaggcgctcctcaatgtcccccacaccactacctagagaaatagctccg
cccaagagtttaaagtccagccaatctgggcctctcagagagtctgggactggtgtgaaa
cggtcctacacagaggagctgctggatatggggatcaactttggagtgccagggggagtc
cagtttccctactcctccaccaaccccttcatcactacagcctcagcgccaaataacact
cctgttagttccgaggacatgagcaacctattcaagagcctgcagttggaaaatattgtc
aatgtgtaccagcttggcactaaagaaagaggacagacgcagggcaatgaagacgataga
ggtgacggtgaccaccccccgatcccccctgcagtcacgcccctggtggacaaccagcac
cgtatcctggtgagccggctgccatcggaccagtcacccagccgtgtgaagaacaagctc
accctctacttccagcgcaggagcaacggtggaggagaggtgctggacgtgacctaccct
taccccccgacccatcctgaccaggccctggtcaccttccgcagtcccagagatgcagag
caggtgctcttacaagcagaccgaattgttactgtgaatgagcggccttgccttatacag
ctcaagaggtttaactgtgctcagattgcggtgccgcccggcgtctccggcgacaaggcg
gccatcttccatagcctgctttcactcgaggggcggagcttcagccaggccgatgtggag
gaggcggtgcagtcgtgccgggatcttccctcggccctcaagtacctgtcccatgaatgc
cccatctgccgcgagcaggtgtccttcagcaagatcatctctatgacccactgcccatgt
gccttctgcgagagctgcttcaaggcctacttctcccaggccatcaaggagaagagcatc
gtccatgtggtgtgtcccctgtgtggccagcctgacgttcgtcagagccagggaggcgtg
gaggaggccttggactacttcagccttctggacacacagatcaggcactacctagatcct
cagattcacgagttgttccagaggaagctgagagaccgagccttgcaggagatgcccaac
ttccgctggtgtgcccactgctcctttggccttctacatgaggctgaccagctgaggatg
gactgtcctagttgtaggaagagcacctgctcccaatgcaagaatgcatgggctccacaa
caccagggtctttcctgtgagaagttcagagagtggcaactccacaataacccggagtac
cagaccgcaagactggagaatctcctcagcaggaataaaatagaatgtccaaaatgcaag
tttgtgttctacctctcaaagggagggtgtctccatttcaaatgcacccaatgccagcac
gagttctgtggcggctgtaacaggcccttcaaattaggcgcggggtgtgacttctcggct
gagtgcgggtccaaggggttacatgcccaccaccccagggactgcctgtactacctgagg
gactggaacgtgcccagactacacaagctacttcagctttacagagtgtccctcgctggc
atggtgaaatccaaagagggctctacagggacaaacacacaaggtgtgtgtgcagtcctg
gagcacagagagatgggtagagacgggccttgtggtcgacccactcttccagagtacagc
ggctactgcgccttacactataaagagtgtctagtggagctgatcaaccggagtcacgcg
gatccagccgttctgttcgatgtggccgagatgttggccgagttacagaggtggcacatt
cctgttccacagaagaaccctcaggaacctgaggcactctatgtacagcaccttagacag
accctgactaggatggttggcctgagggacaacaagctgccccctgtgaaggtgaaagat
gacctttgccccctaccctcgtcgagccctgcgggaccacgctggtcttctgctcagagc
aacacaccaaggctcttccctgatgactcccaattgctgctcttgctcaacgactaa
DBGET
integrated database retrieval system
