Coregonus clupeaformis (lake whitefish): 121534614
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Entry
121534614 CDS
T08357
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121534614
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121534614
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Motif
Other DBs
NCBI-GeneID:
121534614
NCBI-ProteinID:
XP_041697124
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All DBs
Position
21:27665475..27703472
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AA seq
837 aa
AA seq
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MAAVLGNSTRTMGTSDCELRSQFKRRNRRRSTRKERTSMLSSFIGPMKIRDTGTTTSKDD
GDTSNSSSVEVKENRHSRNQVDYSTIQQPAHHPSALYTDISRRLSRTTALQRKQPLMEGK
DRLLYELQLICKRTAHCFTSDSATTMSALSVEGGPSPGSDATCWKTMRTSWSVTKKNALV
QLNELRPGLQYEIASWTGPVHAPVFTVGVEVNGLRFEGRGPTKKKAKMKAAEMALRSFIQ
FPNAPQAHITMGNLNFINTTAPTDFTSDQADLVPDTLFKEFEPEAQEDQFLYHRTDGKEL
PFEEPPAQGDTQLLYHSHRTGEKGQELLSSICNHGRLVCLTLDLMSSANQKRQRIGSSIV
EELRPVALLNELRPGLRYVCLTERVRGRPIRSFVMAVWVDGRIFEGCGRSKRLAQAQVAA
SALQDLFNISLGPERSISHTASWAKSSQLPQCFAESIFHLVREKHSELADCCCTTSQSHS
RYKVLAGIVMTRGFDVRRGQVVSLGTGTKCFSGVCVSDQGWTVNDCHAEVITRRAFLRFL
YTQLELFLCNWPDSLEKSIFVRDKESGYRLRDGILFHMYVSSSPCGDARLNCPYEVTATH
HSWHRFVRKLRCHLRMKMEGGEGTLPVSVRRANQKWDRGLPREPPVTMSCTDKMARWNVL
GLQGCLLSHLVEPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRHNRLLLGCLSS
SEGRHPGKSPSFSVNWSAGDGELEVVDTSTGRRKDSGTPSRLCKRSLFTRWERLHHQLSR
PGQVLGDEKAIKTYCGAKMTAGAYQRAKQKFVLSLQEAGLGIWNRKPPEQEHFQSSV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtacttggaaacagcacccgaactatgggaacttcagactgtgagctgaga
agccagttcaaaaggaggaacaggaggaggtcgaccagaaaagagagaaccagtatgctg
tcatccttcatcggccccatgaagattagagatactgggacaacaacatcaaaagacgat
ggagacacttcaaatagcagcagcgttgaggtgaaggagaatcgtcacagcagaaaccaa
gtggactattccaccatacaacagcctgcacatcatccatcagctctttacactgacatc
tccaggaggctctccaggactactgctctacagaggaagcagccattgatggaaggaaaa
gacaggcttctctatgaactccagttgatctgtaagaggacggcccattgttttacgtca
gatagcgcaacgactatgtctgcactgtcggttgagggaggaccatcacctgggagtgac
gccacctgttggaagacaatgaggacttcctggtctgtcacaaagaagaacgccctggtg
cagttgaacgagctgagaccaggtctacagtatgagatagcatcctggacagggccagtt
cacgcccctgtgttcactgtaggagtagaggtgaacggcctcaggttcgagggccgaggc
cccaccaagaagaaggctaagatgaaggcagcagagatggctcttaggtccttcatccag
ttccccaacgcccctcaggctcacatcaccatgggaaacctcaactttatcaacaccaca
gcaccaacagacttcacctcagaccaggccgatctcgtccctgacacgctcttcaaggag
tttgagccagaagcacaggaagaccaattcctttaccacaggacagacggaaaggagttg
ccatttgaggagccaccagcgcagggagatacacaactcctgtatcacagccacaggaca
ggggaaaagggacaggagttgctctccagcatttgtaaccatgggagactggtatgcctg
acccttgacctgatgtcctcagccaatcaaaagaggcagaggattggttcctccattgtt
gaagaactgaggcctgtggctctgctcaatgagttaaggccaggcctgaggtacgtctgc
ctgacggagagagtgcggggcaggccgatcaggagctttgtgatggcagtgtgggtggat
gggaggatatttgagggctgtgggcgcagtaagagactggctcaagcccaggtagcagcc
tcagccctacaggacctgtttaacatcagtctggggcctgagaggagcatcagtcatact
gccagctgggccaagagctctcagctacctcagtgctttgcagagtcaatcttccacttg
gtgagagagaaacacagtgagctagctgactgttgctgcactacctcccagtcacacagc
cgttacaaagtactggcaggcatcgtaatgactagaggttttgatgtgaggcgaggccag
gtggtgtctctggggacagggaccaagtgtttcagtggagtgtgtgtcagtgaccaggga
tggacggttaatgactgccatgctgaggtcatcaccaggagggctttcctccgcttcctc
tacacccaactggagctcttcctctgtaactggccagacagtttggagaagtcaatcttt
gtgcgagacaaagagtctgggtacagactgagagatggtattctgttccatatgtatgtg
agctcatcgccctgtggagacgcacgcctcaactgcccctacgaggtaacagctacacac
cacagctggcacagatttgtaaggaagttgcgctgccatctgaggatgaagatggaaggc
ggtgagggtacacttcctgtcagcgtacggcgagccaatcagaaatgggacagggggttg
ccgagggaacctcccgtcaccatgtcctgcacagataaaatggccaggtggaatgttctt
ggtctccagggctgtctcctgtctcacctggtggagccggtgtacctccacagcctcact
gtgggcagcctgtgccacacgggtcacctgggaaggaccatggcacgacgcatggggcac
atcgcccccctgccatcctcctatagacacaacaggctactcctcggctgcctcagcagc
agtgagggtcggcatccagggaagtcccccagcttcagtgtgaactggagtgctggagat
ggggagctggaggtggtggatacctcaacaggcaggaggaaagactcagggacaccatcc
agactctgcaagagatcccttttcactcgttgggagagactacaccaccagctgagcagg
ccaggacaagtgttgggtgacgagaaggccataaagacgtactgtggagctaagatgaca
gcgggggcctaccagagagccaagcagaagtttgtcctctcactgcaggaggcaggcctg
ggcatctggaacaggaaaccaccagaacaggagcacttccagagcagtgtgtaa
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