Coregonus clupeaformis (lake whitefish): 121534706
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Entry
121534706 CDS
T08357
Name
(RefSeq) leucine-rich repeat-containing protein 52
KO
K28883
potassium large conductance calcium-activated channel auxiliary gamma subunit LRRC52
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121534706
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121534706
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
121534706
NCBI-ProteinID:
XP_041697222
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Position
21
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AA seq
343 aa
AA seq
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MNYDNLRGQVANVKPHYQPSAQSLRLIILLILVMGVTPSPALTAGCPERCVCDDQLVVQC
AGQHLTAFPTDLPLATRQLIISNNRIVELPPLQLNYLSDLVYLDCSNNSLTEIFMSTFGN
LGKLAYLDLSFNTLTRIEARTFGPLSSLVMLRMTDNPGLSYIHPDAFARNSALQVLDVSR
NNLTVFNISSLIALPTLRSVGLSGNSWSCDCDNEDLCLWVHIEAFKFQDEGQTVCHGPPD
LQGQRLGELGLQLRSRCHQGLGSWDYLFFLAIGFVIFAAGTVSAWAIGVVIVLYERYVKK
KSEQMDPDDEVEQDAGPGTGGGGDHHANPRGNGDMKNTGHMVV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgacaacttgcgaggacaagtggccaacgtcaaacctcattatcagcccagc
gcacaatccttgcggctcatcattctgctgatcctcgtcatgggggtgaccccgtccccg
gctctgacagcgggatgtccggaacgctgcgtgtgcgatgaccagctggtggtccagtgc
gccgggcagcacctcaccgctttccccactgacctgccgctggccacgcggcagctcatc
atctccaacaaccgcatcgtggagctgccgccactgcagctcaactacctgtcggacttg
gtgtacttggactgtagcaacaattccctgacagagatttttatgtccacattcgggaac
ctggggaagcttgcttacctggacttgtccttcaacaccttgacgcggatagaggccagg
acgttcgggccgctgtccagcctcgtgatgctgagaatgacagacaaccccggcctgtcg
tacattcacccggacgctttcgcgaggaactcggcgctgcaggtgctggacgtgagccgg
aacaacctgaccgtgttcaacatcagttccctcatcgcgctgcccaccctgcgctctgtc
ggcctcagcgggaattcctggagctgcgactgcgacaacgaggacctctgtctctgggtc
cacatcgaagcattcaagtttcaagacgagggccagacggtgtgccatggtcctcctgac
ctgcaggggcagcgtctgggtgagctggggctgcagctgcggtcgcggtgccaccagggc
ctgggttcctgggactacctgttcttcctcgccatcggcttcgtcatcttcgcggcggga
acggtgtcggcgtgggccatcggcgtggtcatagtgttgtacgaacgctatgtcaagaag
aagagcgagcagatggaccccgacgacgaggtagagcaggacgcaggacctggcacgggt
ggcgggggtgatcaccatgccaacccacgtggtaatggggatatgaaaaacactggtcac
atggtggtatga
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