Coregonus clupeaformis (lake whitefish): 121534824
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Entry
121534824 CDS
T08357
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121534824 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121534824 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
CitX
Adhesin_P1_N
RPN11_C
TACC_C
YscO-like
Motif
Other DBs
NCBI-GeneID:
121534824
NCBI-ProteinID:
XP_041697312
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Position
21:complement(30196693..30213353)
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AA seq
1148 aa
AA seq
DB search
MRILMYFIPIRVSATMKSSWIFLCGLSICTWLSVQGTYSYGGSDICECNGKSRYCLPDSG
GLHCVDCQDNTEGRHCERCKEGFHHQRAGDRCLPCNCSPIGSVGSHCDSKGHCSCRAGAQ
GEKCDRCPNGTPISSNGCANSGQLTDNSVTAQSLPCFCYGHSSQCSPAKGYSVHTITSTF
DNGPEGWRAATAHGVTPSQVHFRWSPTHKDIEVISKDIMPAYLYAPDSYLGNQELSYGQN
ISFSLRLDRGVRHPSTADVVLEGSGLRVAASLGDLRTIVPCGQKITYTFRLDEQQSSKWS
PLLSSFQFQTLLQNLTAIKIRGTFGENGRGYLDNVRMESARQGAGTPAAWVQNCNCPAGY
EGQFCERCAAGYKRSSPSKGPYSSCEPCSCRGGSCDSETGDCYSADETPGRQTCQLGYYN
DPAQPRSCLKCPCPNGAACSVSPGTTRVKCDLCPPGTTGSRCHTCQDGFYGNPLGENGVQ
RPCQRCQCNGHVDPNTVRSCDPQTGACLKCLSHTTGFFCEKCVDGYHHSMPSEACKPCGC
NFQGSLYNKCSDNGQCSCREGFEGLKCQRSACPSCFNPVKTKMEGYTRKLREIETLFTGK
ESASLPVNNAQMERAIRAAQDIVTDLQRNAQTLSESEKDLQARLSDISTTQLSEGRDIQA
ISNTINNIKLQDQKYQRQVSDVQTLINDVRRKLEEARLNIKQAEFPLSAAEADTDSLSTL
VQRATGLAEKHQSKAGTVEKAANSALAESEKSLALMRSVMTGENKIRELISDLKTKYDEN
SAQVKAMESLATRLSSSAQDESRMAADTLQQIASLELNIPGPLKDIDSVAAKLDGLRERV
EENLTGYQALQEDTQEDKAAVEDLLVQGKAAQQEYDQLLTRANAAKADTELALKDITDNI
DGVDGALEMLRGFDGQISKNKALADEAIKRLPGINATIQQAVGDNSETLFIIGSVSGDYN
DALGTVSSLEAVVSQLEGMSGSLPVAPADLLKDATKLKGDVQDLKNQAVATVSKVAAERA
NAEGQRDRAAEALMGGTGAYINAKHTRDAVGETLLAINNLLSMIGEPGSVDEERLGELEQ
SIASARGQVNQQLRPRLQDLEEKEAGQRARLSGLNLDIDMILDDIRNLEDIHANIPKGCF
NSPPIERP
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgatgtacttcattcctattagagtttctgcgaccatgaagagcagttgg
atatttctgtgtggactttctatttgtacctggttgtctgtccaaggaacctacagctat
ggaggatcagacatctgtgaatgcaatggaaagtcacgttattgcctgcctgactctggg
ggcctccattgtgtggactgccaagacaacacagagggaaggcattgtgagaggtgcaag
gagggattccaccaccagagggcaggagacaggtgtctgccatgtaactgcagccctata
ggttccgtaggctcacactgtgacagtaaaggacattgcagctgtagagcgggtgcacag
ggggagaaatgtgaccgatgccccaatggaacacctatcagctcaaatggctgtgctaac
agtggtcagctcactgacaattcagtgacagctcaatctctaccttgcttttgctatgga
cactcgtctcagtgctccccagcaaagggctactcagtccacacaatcacctcaacattc
gacaatgggcctgaggggtggcgagcggccacagctcatggtgtgaccccatcccaagtc
cacttccgctggtcccccactcacaaagacattgaggtcatctccaaagacatcatgcct
gcttacctctatgcccctgactcttacctgggaaaccaggagctgagctacggtcagaac
atatccttctccctgaggctggaccgaggggttcgccacccgtccacggctgatgtggtg
ctggagggatctgggctgagagtggcagcttccctgggagacctgaggaccatcgtcccc
tgtggacagaagatcacctacacattcagactagatgagcaacagagcagtaaatggagc
cccctcctttcatctttccagtttcaaacactcctccagaatctgactgccatcaaaatc
cgtgggacatttggggaaaatgggcgtggttaccttgacaacgttcgtatggagtctgcc
cgtcagggggccggtacccctgctgcctgggtccagaactgtaactgcccagcaggatac
gagggccagttctgtgagaggtgtgctgcagggtataagagaagttccccaagcaaaggt
ccatacagctcctgtgagccctgcagctgtagaggaggaagctgtgactctgaaacagga
gactgttactctgcagatgagacccctggtcgccagacctgccagctggggtattataat
gaccctgcccagccacgctcctgtctgaagtgtccctgtcccaatggagctgcctgctct
gtgagcccaggaaccacgagggtcaagtgtgacctctgtccacctggcaccactggctca
cgttgccacacctgccaggatggtttctatggcaatcccttgggggaaaatggcgtccag
aggccttgccagcgctgccagtgcaacgggcacgtggaccccaacactgtccgtagctgt
gacccgcagacaggggcgtgcctgaaatgtctgagtcataccactggcttcttctgtgag
aaatgtgtggatggctatcaccacagcatgccatcagaggcatgcaaaccttgtggctgc
aatttccagggctctctgtacaacaaatgcagtgacaacggccagtgttcatgcagagaa
ggctttgagggtctgaagtgccagcgttctgcatgtccctcctgcttcaaccctgtcaag
accaagatggaggggtacactcgtaaactgcgggagatagaaactctgtttacgggcaag
gagagtgccagtctgccagtgaacaacgcccagatggagagagccatcagagcagcacag
gacatagtcacagacctgcagagaaatgcacagacactctctgaatcagagaaagactta
caggcccggctctcagacatcagtacaacccagctgagtgaaggcagagacatccaggcg
atctccaacaccatcaacaacataaagctgcaggaccagaagtaccaacgacaggtctct
gatgttcagacgctcattaatgatgtgcggcgcaaactagaagaggcaagactcaacatc
aaacaagctgagttccctttaagtgcggcagaagcggacacagacagcctctctactctg
gttcagagagcaacaggcctggctgaaaaacaccagagcaaagcggggacagtggagaag
gcagcaaacagtgcccttgcagagtcagagaagtccctggcactcatgagatctgtcatg
acaggggaaaacaagatcagggagcttatcagtgatctcaaaaccaagtatgatgagaac
tcagcccaggtgaaggccatggagagcctggccactcgcctaagcagctctgcccaagac
gagagcaggatggcggctgacactctgcagcagatagcctccctggagctgaacatccct
ggtcctctcaaggacattgacagtgtggcggctaaattggatggcctgagagaacgggtg
gaggagaacctcacagggtaccaggcgctacaagaggacacccaggaggacaaggctgca
gtagaggacctcctggtccaggggaaggcagctcaacaggaatatgaccaactccttacc
agagcgaatgcagcaaaggctgacacagaactggccctgaaggatatcacagataacatt
gatggggtggatggcgcactggagatgctcagagggtttgacggccagatcagcaagaac
aaggctttggcggacgaggccataaagagactccctggcatcaatgccaccattcagcaa
gctgttggcgacaactcagagaccttattcatcataggcagtgtgtctggagactacaat
gatgcactgggcaccgtcagcagcctggaagctgtggtctctcaactggagggaatgtcc
ggctctttaccagtagctcccgctgatctactgaaggacgccaccaagctgaaaggggac
gtgcaggatctgaagaaccaggcggtagccactgtttccaaagtggcggcagagagggcc
aacgctgagggacagagagacagagctgcagaggctttaatgggaggaactggtgcctac
atcaatgccaagcatactagagatgcagtgggagaaacactcctggccatcaataacctc
ctgagcatgatcggtgagccaggcagtgtggacgaggagaggctgggtgagttggagcag
tccatcgccagtgctcgtggccaggtcaaccagcagctccggcctcggcttcaggacctg
gaggagaaggaagccggccagagggccaggttgtctggcctcaacctagatattgatatg
atcctggacgacatcaggaacctggaggacatccacgccaacatccctaagggctgcttc
aactccccacctattgagagaccttaa
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