Coregonus clupeaformis (lake whitefish): 121534828
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Entry
121534828 CDS
T08357
Symbol
gad3
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00250
Alanine, aspartate and glutamate metabolism
cclu00410
beta-Alanine metabolism
cclu00430
Taurine and hypotaurine metabolism
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
Module
cclu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121534828 (gad3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121534828 (gad3)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121534828 (gad3)
00430 Taurine and hypotaurine metabolism
121534828 (gad3)
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121534828 (gad3)
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GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SHMT
DegT_DnrJ_EryC1
SepSecS
DUF3586
Motif
Other DBs
NCBI-GeneID:
121534828
NCBI-ProteinID:
XP_041697315
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Position
21:complement(16352223..16375231)
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AA seq
555 aa
AA seq
DB search
MDYLQLPESIIENSTPGGQILAESKQRSSSDNINPPQTSDNTCIPKDFSCIYSKDLLPAL
SGEDTTKGFFQELVSVLLSYVCKSFRRSSKVLDFHHPHQLREGLEGFSLDLPDQPENLEQ
LLVDCRDTLKYGVKTGHPRFFNQLSSGLDVIGLAGEWLTSTANTNMFTYEVSPVFILMEE
VLLRKMQEIVGWSEEEGDGVFCPGGTMSNLYSVLLARYHFFPEVKTKGMTALPRLILFTS
AHSHYSVKKSAAVLGIGSENVVVVKCDDRGKMIPAELESSIITAKDQGCVPFYVNATAGT
TVYGAFDPLNAIADICESHGLWLHVDAAWGGGLLMSKRHRVKLQGIERAWSVTWNPHKMM
GAPLQCSAILVKKRGLLQACNQLCAEYLFQTDKHYDTSYDTGDKTIQCGRHVDVFKLWLM
WKAKGSEGFESQVNKCLENAEHLFDKIKQRPDFELVFKGKPEHSNVCFWYIPPSLRKMPP
GPERNRRLHEVAPKIKAKMMEQGMAMIGYQPLGDKVNFFRCVFSNPATQTEDVDYLLEEI
ACLGHDICIRIETNL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggattacctgcagctaccagaaagcatcatagaaaactctacacctggtgggcagatt
ttggcagagagtaaacagagaagctcctctgacaatatcaaccctccacagacaagtgac
aacacctgcatacccaaggacttcagctgcatctacagcaaagatctactccctgccctc
agtggtgaggacacaaccaaaggtttcttccaagagctggtgagcgttctcctcagctat
gtctgcaagtcgttcagaagaagctccaaagtcctggacttccaccaccctcaccaactc
agagagggtctggagggcttcagtctggatctcccagaccagcccgagaacctggaacaa
ctcctggtcgactgcagggacaccttgaagtatggagtcaaaacaggtcacccacgcttc
ttcaatcagctgtcatcagggctggatgtcatcggtctggccggggaatggctgacatct
accgccaacacaaacatgtttacttatgaagtgtccccagtgttcattctgatggaggag
gttctactgaggaagatgcaggagattgtgggttggtcagaggaagagggggatggtgtt
ttctgtccaggagggaccatgtccaatctgtacagtgtactactggccagataccacttt
ttccctgaagtgaagaccaaagggatgactgctctgcccaggctaatcctcttcacctca
gcacatagtcattattcagtcaagaaatctgcggcagtccttgggatagggagtgaaaat
gttgtggtggtgaaatgtgatgaccggggaaagatgatccctgcagaattggagtcaagt
atcattactgccaaagatcagggttgtgtcccgttctacgtcaatgccacagcaggcacc
actgtgtacggagcctttgatcctctcaatgccatcgcagacatctgtgagagccatgga
ctctggctgcatgttgatgcagcctggggcggaggactgttgatgtccaagaggcaccgt
gtgaaactacaagggattgaacgagcctggtctgtgacttggaaccctcataaaatgatg
ggtgctccgctgcaatgctcagccatactggtgaagaaaaggggcctcttgcaagcctgt
aatcagctgtgtgcagaatacctcttccaaactgacaagcactatgacacctcgtatgac
accggagacaagaccattcagtgtggcagacacgttgatgtcttcaagctctggctcatg
tggaaggccaagggttcagaaggctttgaatcacaggtcaataaatgtttggaaaatgct
gagcacttgtttgacaaaatcaaacaaagaccagactttgaactcgtcttcaaaggcaaa
cctgaacacagcaacgtgtgcttctggtacatcccaccaagtctgaggaaaatgccacca
ggtcctgagaggaacaggagactccatgaggtggcaccaaagatcaaagccaagatgatg
gagcaggggatggccatgattggctatcagccgcttggagacaaagtgaacttcttccga
tgtgtcttctccaacccggccacacagacagaggatgtggactacctgttggaggagatc
gcttgtctcggtcatgatatatgcatcaggattgagaccaatttatga
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