Coregonus clupeaformis (lake whitefish): 121534837
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Entry
121534837 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121534837
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121534837
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121534837
NCBI-ProteinID:
XP_041697323
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Position
21:207924..254166
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AA seq
553 aa
AA seq
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MDSIDAEGLYLSTEQHGQPQCELPHTALEVPTMGGAKKMNGTLDHPDQPDIDAIKMFVGQ
IPRSWAEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFITYYTRKSALEAQNALHNM
KILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRG
PDGLSRGCAFITFTARQMAQSTIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRIAQQLQ
QQMQQLNAASMWGNLTGLNSLGPQYLALYLQLLQQSASSGNALNNLHPMSGMSGLNAMQN
LAALAAAASATQATPTGSSALTTSSSPLSVLTSSGTGTGHQAHSSWDAYKAGSSPTSCNN
NSGNPMASLGALQSLAAGAGAGLNMGSLAELLCLGMAALNGGLGSGGLSNGTGSTMEALT
QAYSGIQQYAAAALPSLYNQSLLSQQSVSAAGSQKEASDSRSTGPEGANLFIYHLPQEFG
DQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSSQAAIQSMNGFQIGMKRLK
VQLKRSKNDSKPY
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatagcatcgacgctgaaggcttgtacctgtccacggagcagcatgggcagccacaa
tgtgagcttccccacactgccctggaggtacccaccatggggggggcaaagaagatgaac
gggaccctggaccacccggaccagcccgacatcgatgctatcaagatgttcgttggccag
atcccacggtcctgggcagaggaacagctgcgggagctttttgagccttacggcgccgtc
tacgaaatcaatgtgttgcgtgacaggagtcaaaaccccccacagagcaaaggttgttgt
ttcataacatattacactcgcaaatcagcattggaagcacaaaatgcccttcacaacatg
aaaattcttccagggatgcatcaccccattcagatgaagccagctgacagtgagaagaat
aatgcggtggaagacaggaagttgttcataggaatgatatcgaaaaagtgtaatgagaat
gacatcagacttatgttctcgccgtacggacagattgaggaatgtagaatactacgtggg
ccggatggactgagccgtggttgtgcgtttatcacttttacagcaaggcagatggcacag
tcaacaatcaaatcgatgcaccaatcacaaactatggagggctgctcgtctcccatcgta
gttaagtttgccgacacgcagaaggacaaggagcagaagcgcatcgcccagcagcttcag
cagcagatgcagcagctcaacgctgcctcaatgtgggggaatctgaccgggctcaactct
ctgggcccacagtatctggcactttatttacagcttctccagcagtctgcctcctctggg
aatgccctcaacaaccttcaccccatgtctggtatgtcagggctgaatgccatgcagaac
ctggctgctctggcagcggcggccagcgccacacaggccacgcccacgggcagcagcgct
ctcaccacctctagcagtcccctcagcgtgctcaccagctcaggtacgggtactggacat
caggcacactcatcatgggacgcctacaaggcaggatcgtcacccacatcctgtaacaac
aactcagggaaccccatggcctccttaggggcgctgcagtcgttggccgcaggggctgga
gctggcctcaacatgggctcacttgcagagctcctgtgtctagggatggcagccctgaac
ggcggtctaggcagcgggggcctgtcgaacggaactggtagcaccatggaggcccttacc
caggcctactctgggatccagcagtacgctgctgctgccctccccagcctctacaaccag
agcctgctctcccaacagagtgtcagtgctgcaggaagccagaaggaagcaagcgacagt
cggagcacgggccctgagggagccaacttgttcatctaccacctcccccaggagtttgga
gaccaggacctgctccagatgttcatgccctttggcaacgttatttccgctaaggtgttc
attgacaagcagaccaacctcagcaagtgttttggctttgtgagttacgacaatccagtc
tcatcacaggccgccattcagtcgatgaacggtttccaaattggtatgaagcgactaaag
gtgcagctgaagcgatccaaaaatgacagcaagccatactga
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