Entry |
|
Name |
(RefSeq) BEN domain-containing protein 4-like
|
KO |
K27845 | BEN domain-containing protein 4 |
|
Organism |
cclu Coregonus clupeaformis (lake whitefish)
|
Brite |
KEGG Orthology (KO) [BR:cclu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cclu03400]
121534838
DNA repair and recombination proteins [BR:cclu03400]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
121534838
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:35801116..35827833
|
AA seq |
556 aa
MEGEKQPADEGLCGPKMCGQQRGPYSNLKTFPNRRLAGKARFDRPTMVDIPLLGDGGGQN
YNHLSHHHPYQQPHLQQQQQLHQTTHTISSSSQHHPTSQLQRQQHFPCDNRPSSRVATST
SANVGGVAPASLCLQQTVGGGTTEHRDPTYLPGRAALNHESADCTYGISSENHLILDAFA
QQCSRVLTLLNSGRFVEPHDPPPFSLTSHIKQEESCLSGCGGGQVGHCPTLGKPRPKESS
TVDPDEEAQRSHWSQKQTYAFLHIFTKSLQNYLLTGPQQPYPDLSLKGERGPPAESGVSP
GHNLGGWSSPAPSESYGQPSSTLPEEEEESCCPRCVELEQEVLCLQQENEELRNKMDHIP
APCQNVLDFFKTVLQHHNQFIQPTPEEQLTKEEERKTYEASKQLLENYPLFITNKQWDEA
VNSSKKDGRRLLRYLIRFIFTTDELKYSCGLGKRKRSVHSGEPGPERRPLNPVKVNCLRE
FIRMHCASNPDWWMPSEEQINKVFSDAVGHARQGRSVGTFLGSSGSSTSSLYMEAYDGHL
SQDEVYLKGSHNGLGD |
NT seq |
1671 nt +upstreamnt +downstreamnt
atggagggggaaaagcaacctgccgacgagggtctctgcggcccaaagatgtgcggtcag
cagcggggtccatacagcaaccttaaaaccttcccaaacaggcggttggcggggaaggcg
cggttcgacagacccacaatggtcgatatcccgctgctgggagacggaggcggacagaac
tacaatcatctcagtcaccatcatccgtatcagcagccgcatttgcaacagcagcagcag
ctccatcaaacaacccacaccataagcagcagcagccaacatcacccgacatcccagctg
cagaggcaacagcacttcccatgcgataacaggcccagcagcagagtcgcgacatctacc
tccgcaaatgtcgggggtgtggcgccagcatcactttgccttcagcagacggtcggcggc
ggcaccacggagcaccgggatcccacctatttgcctggacgagccgcgctcaaccatgaa
tctgctgattgcacttacgggataagctcagaaaaccatctaatcttggatgccttcgcg
cagcagtgtagccgtgtactcactctcctcaacagtggccggttcgtggagccccatgat
cctccgcccttctccctcacctcccacatcaagcaggaggaaagctgcctctctgggtgt
ggggggggtcaagtgggtcactgccccaccctgggcaagccacggcccaaggagagctcc
accgtcgatcctgatgaggaagcccagcgcagccactggagccaaaaacaaacatacgcc
ttcctgcacatcttcacaaagtccctccagaactacctgctcaccgggccccagcagccc
tacccggacctgagcctcaagggagagcgaggcccaccggccgagtctggggtgtcgccc
ggccataacctggggggctggagctccccagccccttcagagtcgtatggccaaccctcg
tccaccctgccagaggaggaagaggagagctgctgccctcgctgtgtggagctggagcag
gaggtgctgtgtctgcagcaggagaacgaagagctgcggaacaagatggaccacatacca
gctccctgccagaatgtgctggacttcttcaagactgttctccagcaccataaccagttt
atacagccaacgccagaggaacaactaacaaaggaagaagaacggaaaacatatgaggcc
agtaaacagctcctagagaactaccccctcttcatcaccaacaagcagtgggacgaggct
gtcaactcgtccaagaaggacggccggcggctgctgcgctacctgatccgcttcatcttc
accacggatgagctcaagtactcatgtggcctgggcaaaaggaagcgctcggttcactca
ggagagcctgggccggagagacggcccctcaaccccgtcaaagtcaactgcctcagagag
tttatccgaatgcactgtgcctccaaccctgactggtggatgccttccgaggagcagatc
aacaaagtgttcagtgatgctgtgggccatgcgcgccaaggtcggtccgtgggcaccttc
ctgggcagcagtggcagcagcactagcagtctttacatggaggcttacgacgggcacctg
tcacaggatgaagtgtatctaaaggggtctcacaatggcctgggtgattga |