Coregonus clupeaformis (lake whitefish): 121534839
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Entry
121534839 CDS
T08357
Name
(RefSeq) rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121534839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121534839
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121534839
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Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
121534839
NCBI-ProteinID:
XP_041697365
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All DBs
Position
2:35872977..35901969
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AA seq
652 aa
AA seq
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MMSLIELNDDQRWVPTHVNVNVLRARGLRTKGKHGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEAGGRSAFPSGSGDLVLTVMHRVLIGLDVFLGQAIIPLDKIFQD
GMCPRDEWLKLNSKAGRKEKERGEMQVTVQFTRNNMTASMFDLTMKDKPRSTFGKLKDRV
TGRKRGDVESSSAIVPGRFAALSSSLGQPFGEGGGGGGGEDPGEVEVAEEKRSKVKDFFL
GKGKLRRSSDTRSCSSLASENSVSSAISESPCPPPLALGLLVDPPSSPIYSSKVKVDTHH
GDTDLVKKVLTSTQSSPKILTHKRAFSDEANRITTTAIPRPCPAVESLKGQGMTLSQSSL
CINGSHVYGSEPVGPKGSGTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSAGEGRRWSFD
KVKKEEKDEEKEAVPPVSQVQSARVGCRPVQAAAPMLSSTTTVDSADKGKKLRKTLFSGG
RSDSLPAKSELSQGSPPPEGRLRGWFGSSDSQNKPSPHPVKPLTTTASQGEKKEGRSVLE
KLKSSIHPGRAAQQTLAVAETEKKIEESLADSSAQYEQLTNMELISLLLQQEMDMEKQQV
ASDQQAAMLEKHEAELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagagttgaacgatgaccagagatgggtgcctacacatgtgaatgta
aatgtccttcgtgcaaggggtttgcggacgaagggcaagcacgggagccgttatgtttac
accatcattcaggttgggaaggagaaatacaccaccggtttggtcgaaaaggcgaccgtg
ccagagtggaatgaggaatgttgtttcgaacttctccccggaatactggaggctgggggt
cgcagtgcttttccctcagggagcggtgacttggtcctcaccgtcatgcaccgggtgctt
atcggacttgacgtgtttcttggtcaagcaatcatccctctggataaaatatttcaagat
ggaatgtgtcctagagatgaatggctcaagctcaactccaaggccggtcggaaggagaag
gagcgtggcgagatgcaggtgactgtccagttcacacgcaataacatgacggccagcatg
ttcgaccttaccatgaaggacaagccgcgctctaccttcggcaaactcaaggaccgcgtg
acggggaggaagaggggtgacgtggagtcctcctcggccattgtgccaggacgcttcgcc
gccctgtcgagttccctggggcagccattcggggaggggggcggagggggagggggagag
gaccccggggaggtagaggtagccgaggagaagcggagcaaggtgaaggatttcttcctg
gggaagggaaagctgcggaggtcatctgacacaaggtcgtgctcgtcgctggcctcggag
aacagtgtgtcatccgcgatcagtgagagcccctgcccccctcctctggccctaggcctc
ctggtggacccccccagctctcccatctacagcagcaaggtcaaagtagacacccaccac
ggagatacagacctagttaaaaaagtgctcaccagcacacagtcttccccaaagatattg
acccacaagcgagccttcagcgacgaggcgaataggatcaccactactgccattccccgg
ccctgtcctgctgtggagtccctcaaaggtcaaggtatgactctctcccaatcctctctg
tgcatcaacggaagccacgtctatggatccgagccggtgggtcccaagggctcaggcacc
cttccatccaagctggtcctcctcgagaagtgctcccctctctctcgttcgctgcagaac
ctgacaaagcggagcgaggacaagggttccgccggcgagggccggcgctggtccttcgac
aaggtaaagaaggaagagaaggatgaggagaaggaggccgtacctcctgtctcccaggtt
caaagtgctcgggtggggtgtcggccggtgcaggcagcagccccgatgctgtcttccact
accacagtggactcagcagacaaagggaagaagctcagaaaaacattattctctggaggg
aggagtgattctctacctgccaagtcggagctgagccagggttctcctccccccgagggg
agactgcgaggctggtttggctccagtgactcccagaacaagccaagcccccacccagtg
aaacccttgaccaccacagccagtcagggggagaagaaagagggccggtcagttctggag
aagctcaagtcttccatccacccaggccgcgctgcccagcagacactggctgtggctgag
actgagaagaagattgaggaatcgttagcagacagctctgcgcagtacgagcagctgacc
aacatggagctgatttcccttctgctgcagcaggagatggatatggagaagcagcaggtg
gcctccgaccagcaggcggcgatgctggagaaacacgaggcggagctgaagaagatcaag
gcacaggtgcgcgacctagaggactacatcgacaagctgctggtgcagatcatggagcag
acacccacactcctccaagtgcgctcccgacacaagtga
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