Coregonus clupeaformis (lake whitefish): 121534869
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Entry
121534869 CDS
T08357
Symbol
retreg1
Name
(RefSeq) reticulophagy regulator 1 isoform X1
KO
K23880
reticulophagy regulator
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121534869 (retreg1)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121534869 (retreg1)
ER-phagy
ER-phagy recepters
121534869 (retreg1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_RETREG1-3
Reticulon
DUF639
Motif
Other DBs
NCBI-GeneID:
121534869
NCBI-ProteinID:
XP_041697400
LinkDB
All DBs
Position
21:2332839..2408319
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AA seq
447 aa
AA seq
DB search
MAAAGHEEEQAVIGDCRISNVINWKRPFRTTTFFAATTAVYWFVALSSYRAYCLLALSLA
LMVTVLLVKDVALSRCVSFSKGAHLWRSMTGSWEIIDTDQDSRSGAGLQVTDSWTSFKLF
LQESSSFKQENPGKFCLLVCSLCTFLAVLGRYIPGVLILYVLVLGIFLWPLMSAHDFGLW
MKPVLHKLGFGLERFLQKIRENHEKRLLQAQADRESIEADLSSLFPRLDSTVCKEMSISD
TEASDVTWTDNGTFNLSEGHTPQTENSDDLDREELFTAGLPEFPSLENGTNGEDDDDLSI
GLPTPPPQPQPQHSRAKGASAPPLQWDPSTQALEFVHKMAGDVIAAAATAIIQERLEAAI
GTTIPTDPHPHPRSLLFPNPTTLLPLDLAEESSSDSDVEEFELLDQSELEQLEGELGLGA
SAAVAAKEPKKSLSSSGGFFSKLLGRH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgggcacgaggaagagcaggctgttataggggactgtcgcatttcaaac
gtgatcaactggaagagacctttcaggaccacgacattctttgctgccaccactgctgtg
tactggtttgtggccctcagttcctatagagcgtactgtcttcttgccctttccttggct
ctgatggtgacagtgctgcttgttaaagatgtggctctctccagatgtgtctctttctct
aaaggggcccacttatggcgcagtatgactggaagctgggagatcattgatacggaccag
gacagcagatctggagctgggctacaggtcacagactcctggacgagcttcaagctcttt
ctgcaggagtcctcctccttcaagcaggagaatccaggcaagttttgcttgctggtctgc
agtttgtgcacctttttggctgttttaggacgctacattccaggtgttctcatcttatat
gttttagtgctgggcatcttcctgtggccactgatgtcagcgcatgactttgggttgtgg
atgaagccagttctgcataaactgggcttcggactggaaagattccttcagaaaatcaga
gagaatcatgaaaagagactccttcaggcacaagctgaccgggagagtattgaagccgat
ctgtcctctcttttccccaggttggactccacagtttgtaaggagatgtctatatcggac
acagaggcctctgatgtgacgtggacagacaacggaacatttaacctgtctgagggacat
acgccccagactgagaactcagatgacctagacagagaagaactattcacagcgggcctc
ccggaattcccctccttggaaaatggcaccaatggggaggacgatgacgacctgagcatc
ggcctacccaccccccctccccaaccccagccccaacacagcagagccaagggggcgtcc
gcgccccccctccagtgggacccctccactcaggccctggagttcgtccacaagatggcg
ggcgacgtcattgccgccgccgccaccgccatcattcaggagaggctggaggccgccatc
ggcaccaccatacccacagacccccacccccaccccaggtccctgctgttccccaacccc
acgacactgctgcccctggacctggccgaggagtcgtcatcggacagcgatgtggaggaa
tttgagctgctggaccagtccgagctggagcagctggaaggggagctgggccttggggcg
agcgcggcagtggcggccaaagagcccaaaaaatccttgtcttcttccggtggcttcttt
tccaaactcctgggccgccactga
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