Coregonus clupeaformis (lake whitefish): 121534932
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Entry
121534932 CDS
T08357
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1 isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121534932
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
121534932
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GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
TIP49
RuvB_N
Mg_chelatase
IstB_IS21
AAA_33
AAA_17
DUF815
AAA_28
PhoH
AAA_18
AAA_7
AAA_14
Zeta_toxin
AAA_lid_PRS2_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121534932
NCBI-ProteinID:
XP_041697490
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All DBs
Position
21:12537823..12579310
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AA seq
720 aa
AA seq
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MFSLSTTVQPQVTVPLSHLINTLHSLKSSIGSSSSATAKPPHRQHASEQDLHSTEPTWSL
RDLGLSDLGVRQLEELVSGMLPRLSQQGAPSSSSPSQQAWRTSHLSSQSFFHNKHGFSGG
NIGTDSPVFCRQIPSPLQTVFTEFHYWPVWVQSRGFKTLRKHKRLQAGFERPMEPDGFTP
SFMKGLLTRDKGMEVETLDKLLKNKNIPDGQQEYFKTGFAEGFLKSQALTRRTQDSLRRT
RFILLVLLLVGLYGLSKTPFLSVRFRTTSGLDSAVDPVQMKNVTFEHVKGVDEAKNELQE
VVEFLRSPEKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYATGSEFDEMFV
GVGASRIRNLFREAKANAPCVVFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPN
EGVIIIGATNFPEALDNALIRPGRFDMQVTVPKPDVKGRTEILNWYLRKIKVDPDIKAGI
IARGTVGFSGADLENLVNQAALKAAVDGKEMVTLKELEFAKDKILMGPERKSVEIDQKNK
EITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHVSMLPEDDRWSETRAQLLAQMDV
SMGGRVAEEIIFGNEFITTGASSDFDAATKIAKMMVTRFGMCERLGVMTYADQTKQSPET
QAAIEHEVRILLKDSYERARALLKSHAKEHKNLATALLQYETLDAKEIKMVLEGKALEIR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgtcaacaacagtccaaccacaggtcactgtccccctgagtcacctgatc
aacaccctccactccctgaagagctcaataggaagcagcagcagtgccactgctaaacct
ccgcacagacagcatgcctcagaacaggacttgcatagtaccgagcccacgtggagcctg
agggacctgggcctgtctgatctgggcgtgcggcagctggaagagctagtgagcggtatg
ttaccacgtctgagtcaacagggggcgccgtcctcatccagccccagccaacaggcctgg
aggacctcccacctgtcttcacagtcgttctttcacaacaagcatgggttctctggcggc
aacattggcactgactcccctgttttctgcagacagatcccctcccctcttcaaaccgtt
ttcacagagttccactactggccagtgtgggtccaaagccgaggctttaaaactctaagg
aaacacaagcgactgcaggcaggctttgagcgtcccatggaaccagacggctttacgcca
tcctttatgaagggcctcctgacgcgtgataaggggatggaggtggaaaccctggacaag
ctcctgaagaacaagaacattccagatgggcagcaagagtattttaagaccgggtttgca
gagggcttcctgaaatcccaagcgctgacacggcgcacacaagactctctgaggaggacg
aggtttatactgctggtcctgctgttggtgggactctatggcctctccaagacccccttc
ctatcggtgcgattccgaaccacatcaggcctggactcggcggtggaccctgtccaaatg
aagaacgtgacgtttgagcacgtcaagggggtggacgaggccaagaacgagctgcaggag
gtggtggagttcctccggagcccagaaaagttcaccgtcctcggagggaaactgccgaaa
gggatcttgctggttggccctcctggcactgggaagactctgttggccagagccgtagct
ggagaggccgacgtccccttctattacgccaccggttcggaatttgatgagatgtttgtg
ggggttggagccagtcgcatcaggaacctcttcagggaagctaaagccaacgccccatgc
gtggttttcattgacgagttggacagcgtcggagggaagagaatcgagtctcccatgcac
ccttactccagacagaccatcaaccagctactggctgagatggacggattcaaaccaaac
gaaggggtcatcatcatcggagcgaccaacttccctgaggctttggataacgctctgatt
aggccgggacgttttgacatgcaggtcactgtccccaagccagacgtgaaagggcgcaca
gaaatcctcaactggtacttaaggaagatcaaagtagaccctgacatcaaggctgggatc
atcgccaggggcacagtgggcttctccggggccgacctggagaacctggtgaaccaggcg
gctctgaaggcggcggtggacggcaaagaaatggtgaccctcaaagagctggagtttgcc
aaggacaagatcctcatgggcccagagaggaagagtgtggagatagaccagaagaacaag
gagatcacggcctaccacgagtctggccacgctatcgtggcgtactacaccaaggacgcc
atgcctatcaataaggccaccatcatgcccagagggccttccctgggtcatgtgtctatg
ctcccggaggatgaccgctggagcgagacgcgtgctcagttgctggcccagatggatgtc
agcatgggaggccgcgtggcagaggagatcatatttggcaatgagttcattaccactggg
gcatcaagtgactttgatgctgccaccaaaattgcaaaaatgatggtgaccagatttgga
atgtgtgagaggctgggtgtcatgacctacgctgaccaaaccaagcagagcccggagaca
caggctgccatcgaacatgaagtcaggatacttttaaaggattcgtacgagcgggccagg
gcgctcctcaagtcccacgccaaggagcacaagaacctggccaccgccctgctgcaatac
gagacgctggatgccaaagagatcaagatggtcctggagggcaaggccctggagatcaga
tga
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