Entry |
|
Name |
(RefSeq) parafibromin-like
|
KO |
|
Organism |
cclu Coregonus clupeaformis (lake whitefish)
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Brite |
KEGG Orthology (KO) [BR:cclu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cclu03021]
121534963
Transcription machinery [BR:cclu03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121534963
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
21:14524357..14598289
|
AA seq |
530 aa
MADVLSVLRQYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKGLLSYLNGESSTSTSIDRSAPIEIGLQR
PTQVKRAADEVSSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDEDITLKQRSFVDAEVDVTRDIVSRERVWRTRTTILQST
GKNFSKNIFAILQSVKAREEGRGPEQRPAQNTTQVDSSIRNKQPVPAAYNRYDQERFKGK
EETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPALQPVPRPVSQARPPPNQKKGSRTPI
VIIPAATTSLITMLNAKDLLQDLKFVTPEEKKKQGIQRDNEVLLQRRKDQIQPGGATLSV
TVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIRAFHLKYD
EQKMDPNVQKWDVTVLELSHHKRHLDRPMFLKFWETLDRYMVKHKSHLRF |
NT seq |
1593 nt +upstreamnt +downstreamnt
atggcggacgtgttgagtgttcttcgccagtacaacatccagaaaaaagaaatcgtcgcc
aaaggagacgaagttatctttggagaattctcttggcccaaaaatgtcaagactaactat
gtcatttggggaactgggaaggagggtcagccgaaggagtactatactctggactcgatc
ctgttcctgctcaacaatgtgcatctccctcatccatcctacgtgcgaagggctgcaacc
gagaacattccagttgtcagaagacctgatcgaaagggcttgctatcgtatctcaatgga
gaaagttctacttcgacaagtatcgacagaagtgcccccatagagattggtttgcaaagg
cccacacaagtcaaacgagcagcagatgaggtgtcatctgaagccaaaaaaccaaggata
gaggacgaggaacgagtgcgtctggacaaggagcgtctggctgctcgactggagggccac
aaagagggcattgtgcaaactgaccagatcaggtcactgtccgaggctatgtccgtggag
aagatcgccgccatcaaagccaagatcatggcaaagaagcgctccaccattaagacagac
ctggatgaggacatcactctgaagcagaggagcttcgtggacgctgaggtggacgtgacc
agggacattgtcagcagggagcgggtgtggaggaccaggaccaccatcctacagagcact
ggaaagaacttctctaaaaacatctttgccatcctgcaatcggtgaaggccagggaggag
ggacgcggccctgagcagaggccagcacagaacaccactcaggtggactcatccataagg
aacaaacagcctgtcccagctgcctataaccgatacgatcaggagagattcaaaggaaaa
gaggaaacggagggattcaagattgacaccatgggcacctaccacggcatgacactgaag
tctgtaacggagggagcgtctgccaggaaggcccagacaccagccctgcagcccgtcccc
agaccagtttcccaagccagacccccaccaaatcaaaagaagggctctcggacccccatc
gtcatcatcccagcggcaaccacatccctcatcaccatgcttaatgcaaaggacctactg
caggacctcaagtttgtaacgccggaggagaagaagaagcagggcatccagcgggacaac
gaggtgctgctccagagacgcaaggaccagatccagcccgggggggccacgctcagcgtc
accgtgccctacagggtcatcgaccagcccctcaaactagctccgcaggactgggatcgc
gtggtggccgtgtttgtgcaaggccctgcctggcagttcaagggctggccttggctgctg
cctgacggatctcctgtggacattttcgctaaaatccgagccttccatctgaagtatgac
gagcagaagatggaccccaatgtgcagaagtgggacgtgaccgtgctggagctgagccac
cacaagcgccatctggaccggcccatgttcctgaagttctgggagaccctcgacagatac
atggtgaaacacaagtcgcacctgaggttctga |