Coregonus clupeaformis (lake whitefish): 121534963
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Entry
121534963 CDS
T08357
Name
(RefSeq) parafibromin-like
KO
K15175
parafibromin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121534963
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
121534963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
121534963
NCBI-ProteinID:
XP_041697538
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All DBs
Position
21:14524357..14598289
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AA seq
530 aa
AA seq
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MADVLSVLRQYNIQKKEIVAKGDEVIFGEFSWPKNVKTNYVIWGTGKEGQPKEYYTLDSI
LFLLNNVHLPHPSYVRRAATENIPVVRRPDRKGLLSYLNGESSTSTSIDRSAPIEIGLQR
PTQVKRAADEVSSEAKKPRIEDEERVRLDKERLAARLEGHKEGIVQTDQIRSLSEAMSVE
KIAAIKAKIMAKKRSTIKTDLDEDITLKQRSFVDAEVDVTRDIVSRERVWRTRTTILQST
GKNFSKNIFAILQSVKAREEGRGPEQRPAQNTTQVDSSIRNKQPVPAAYNRYDQERFKGK
EETEGFKIDTMGTYHGMTLKSVTEGASARKAQTPALQPVPRPVSQARPPPNQKKGSRTPI
VIIPAATTSLITMLNAKDLLQDLKFVTPEEKKKQGIQRDNEVLLQRRKDQIQPGGATLSV
TVPYRVIDQPLKLAPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIRAFHLKYD
EQKMDPNVQKWDVTVLELSHHKRHLDRPMFLKFWETLDRYMVKHKSHLRF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttgagtgttcttcgccagtacaacatccagaaaaaagaaatcgtcgcc
aaaggagacgaagttatctttggagaattctcttggcccaaaaatgtcaagactaactat
gtcatttggggaactgggaaggagggtcagccgaaggagtactatactctggactcgatc
ctgttcctgctcaacaatgtgcatctccctcatccatcctacgtgcgaagggctgcaacc
gagaacattccagttgtcagaagacctgatcgaaagggcttgctatcgtatctcaatgga
gaaagttctacttcgacaagtatcgacagaagtgcccccatagagattggtttgcaaagg
cccacacaagtcaaacgagcagcagatgaggtgtcatctgaagccaaaaaaccaaggata
gaggacgaggaacgagtgcgtctggacaaggagcgtctggctgctcgactggagggccac
aaagagggcattgtgcaaactgaccagatcaggtcactgtccgaggctatgtccgtggag
aagatcgccgccatcaaagccaagatcatggcaaagaagcgctccaccattaagacagac
ctggatgaggacatcactctgaagcagaggagcttcgtggacgctgaggtggacgtgacc
agggacattgtcagcagggagcgggtgtggaggaccaggaccaccatcctacagagcact
ggaaagaacttctctaaaaacatctttgccatcctgcaatcggtgaaggccagggaggag
ggacgcggccctgagcagaggccagcacagaacaccactcaggtggactcatccataagg
aacaaacagcctgtcccagctgcctataaccgatacgatcaggagagattcaaaggaaaa
gaggaaacggagggattcaagattgacaccatgggcacctaccacggcatgacactgaag
tctgtaacggagggagcgtctgccaggaaggcccagacaccagccctgcagcccgtcccc
agaccagtttcccaagccagacccccaccaaatcaaaagaagggctctcggacccccatc
gtcatcatcccagcggcaaccacatccctcatcaccatgcttaatgcaaaggacctactg
caggacctcaagtttgtaacgccggaggagaagaagaagcagggcatccagcgggacaac
gaggtgctgctccagagacgcaaggaccagatccagcccgggggggccacgctcagcgtc
accgtgccctacagggtcatcgaccagcccctcaaactagctccgcaggactgggatcgc
gtggtggccgtgtttgtgcaaggccctgcctggcagttcaagggctggccttggctgctg
cctgacggatctcctgtggacattttcgctaaaatccgagccttccatctgaagtatgac
gagcagaagatggaccccaatgtgcagaagtgggacgtgaccgtgctggagctgagccac
cacaagcgccatctggaccggcccatgttcctgaagttctgggagaccctcgacagatac
atggtgaaacacaagtcgcacctgaggttctga
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