Coregonus clupeaformis (lake whitefish): 121534982
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Entry
121534982 CDS
T08357
Name
(RefSeq) eukaryotic initiation factor 4A-II isoform X1
KO
K03257
translation initiation factor 4A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121534982
03012 Translation factors [BR:
cclu03012
]
121534982
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121534982
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121534982
mRNA cycle factors
Stress granule specific factors
121534982
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-4
121534982
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121534982
Exosomal proteins of bladder cancer cells
121534982
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_30
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
121534982
NCBI-ProteinID:
XP_041697561
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Position
21:complement(15017221..15024717)
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AA seq
431 aa
AA seq
DB search
MLKFEWIMSSDSPDYNSSRDREHDAGPEGMEPDGVIESNWNEITDNFDDMALKETLLRGI
YAYGFEKPSAIQQRAIIPCIKGFDVIAQAQSGTGKTATFAISILQQLDMEQKETQALVLA
PTRELAQQIQKVILALGDYMGAACHACIGGTNVRNEMQKLTAEAPHIVVGTPGRVFDMLN
RRYLCKYSSVLVYFIVAPKCIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSAT
MPADVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQA
VIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARG
IDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTV
DEMPLNVADLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtttgagtggatcatgtctagcgattctcctgattacaacagctcaagagat
cgtgagcatgatgcagggccagaggggatggagcctgatggtgtcatcgagagcaactgg
aacgagattactgacaacttcgatgatatggccctgaaggagacactccttaggggtatt
tatgcgtatggttttgagaagccatcggccattcaacagagggcaatcattccgtgtatc
aaaggctttgatgtcattgcccaagcccagtcaggcactggcaagactgccacgtttgcc
atctctattttgcagcaactggacatggagcagaaagagacccaggctttggtactggcc
cccaccagggagctggctcagcagatccagaaggtgattctggctctgggggactacatg
ggggctgcctgccatgcctgcattgggggcaccaacgtccgcaacgagatgcagaagttg
acggccgaggccccccacatagtggtggggactccaggccgggtgtttgacatgcttaac
aggagatacctgtgtaagtactcatcagttcttgtctacttcattgtagctccgaaatgc
atcaagatgtttgtcctggacgaagctgatgagatgctgagtcgaggttttaaggatcag
atctatgagatctttcagaaactgagcacaaacatccaagtggtcctcctctctgccacc
atgccagcggatgtcctggaggtgaccaagaagttcatgcgagagcccattcgcatcctg
gtgaagaaggaggagcttaccctggagggtatcaagcagttctacatcaatgtagagcga
gaggagtggaagttggacacgctgtgcgacctgtacgagactctgacaatcactcaggca
gtcatcttcctcaacaccaggaggaaggtcgactggctgaccgagaagatgcacgcaagg
gactttactgtctctgctctgcatggagacatggaccagaaagaaagggatgtgatcatg
agggagttcaggtctggctccagcagagtgctcatcactactgacttactggctcgagga
attgatgtgcagcaggtttccctggtcataaactatgaccttcctacaaaccgagagaat
tatattcaccgaattggtcgcggtggccgttttggcagaaaaggcgtggctataaacttt
gtgaccgaagaggacaagcgtatccttcgggacatcgagacgttttacaatacgacagtt
gacgagatgcctttgaatgtggctgacctgatttga
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