Coregonus clupeaformis (lake whitefish): 121535014
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Entry
121535014 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121535014
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121535014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121535014
NCBI-ProteinID:
XP_045062169
LinkDB
All DBs
Position
21
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AA seq
230 aa
AA seq
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MAKPLDHIKRPMNAFMAWSRGQRRNMSLENPKMHNSEISKRLGVDWKLLSESEKQPYIDE
AKRLHAXHIXEHPNYKYRPRRKPKSLLKKDRLPLLGDAEHLKGFSTESLLASAEKARAIL
PPTSWSYWLLDPGKFSTGAVKRISEMPNVLAANGLYYAQSLGYQTGPFGSLGLCPIQHTH
PSPTNPGYVVPCNCGAWSATSLQPQVAYILFPGLNKTSIDPYSSSPHSSV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctttggatcatatcaagagaccaatgaacgctttcatggcgtggtctcgc
ggtcagaggcgaaatatgtcactggagaatcccaaaatgcacaactctgaaatcagcaaa
agacttggcgtggattggaagttgctttccgaatcagagaagcaaccatacattgatgaa
gccaagagattgcacgcgtaacacatannagaacaccccaactacaagtacagaccccgg
cgcaaacccaagagtttgctcaaaaaggaccgtttgcccttactcggggacgcagaacat
ttgaaaggattttcgacggagtcccttttggcttccgcagagaaagctagagccattttg
ccgccgacgtcgtggtcatactggcttcttgaccctggtaaattcagcacaggtgctgtc
aagaggatatcagaaatgcccaacgtgctggctgccaacggtttgtattacgcgcaatct
ttgggataccagactggcccatttggaagtttgggattatgccccatccagcacactcac
ccctcaccaacgaacccggggtacgtcgtgccctgtaactgtggcgcgtggtcggcgacg
agtttacagcctcaggttgcatacattctttttccaggtctgaacaagacttcgatagac
ccgtactcctcctcaccacattcaagtgtgtga
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integrated database retrieval system
