Coregonus clupeaformis (lake whitefish): 121535021
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Entry
121535021 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121535021
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121535021
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Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_5
LRR_LRWD1
LRR_EndoS
SHP
Motif
Other DBs
NCBI-GeneID:
121535021
NCBI-ProteinID:
XP_041697619
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Position
21:19316329..19322115
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AA seq
851 aa
AA seq
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MFTITELASLNDIQPTYRILKPWWDVFMDYLGVVMLMLSIFAMTMQITKDQVACLPCLEE
AEEAAAGPNSCTTQSQQETTSSAVSMTTAHATPMATKYLPDSAVHNIHNTQPIVVKQESK
MQQPEPTGIRTNLDYQQYIFVNQMCYHVALPWYSKYFPYLTLIHTLVLMVSSNFWFKYPK
TSSKIEHFVSILGRCFESPWTTKALSETACEDSEENKQRLTGTTSAPKQVSQENKDENSA
NTSTPMLGNTGVKFSADKPVAEAPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYKL
YVAQTVVKTVKFILILSYTSTFMAAIDFRHKCEPDIKHLTGYKQFFCTHNMAFMLRKLLL
SYMALILIYGMVCLYSLHWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYD
QLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVTRNAQDQQELHLFMLSGLPNAVF
DLTDLEILKLELIPEVRFSAKVSQMTSLHELHLCHCPAKVEQTAFVFLRDHLRCLHVKFT
DVAEIPTWVYLLRSLRELNLVGNLSSENNKMIGLESMRDLKHLKTLYLKSNLTKMPSSLT
ELSPHLIKLVVHNDGTKLLLLNSLKKMTNLADLELHNCELERIPHAIFSLTNLQELDLKS
NNIRTIEEIISFQHLKRLTCLKLWHNKIITIPASIGQVKCLESLHLLHNKLETLPPALFH
LPKLRHLDVSHNSITVIPPDVGLLQNLQHFAINANKVEVLPKQLFRCTKLKVLCLSNNGL
TTLPEMVGQLVQLAQLELRGNCLDRLPSLLGNCRLLRKNCLIVEDHLFDTLPIDVKESLS
RETNVSFASGL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccatcactgagttagcatcgctgaatgacatccagccgacctaccgcatccta
aaaccatggtgggacgtcttcatggactacctgggggtggtcatgctcatgttgtccatc
tttgccatgacgatgcagatcacaaaggaccaggtggcgtgccttccctgcctggaggaa
gcggaggaggcggcagcagggccaaactcttgcacaactcaaagtcagcaagaaaccacc
tcatcagcagttagtatgacgacagcgcatgctacaccaatggccactaaatatctacca
gacagtgcagtacacaatatccataacacccaacccattgttgtgaagcaagagagcaaa
atgcagcaacccgagcccacagggatccgaaccaacttagattatcagcagtacatcttt
gtcaaccaaatgtgttaccatgttgccttgccctggtactcaaagtacttcccgtacctt
actctcattcacacccttgtgcttatggtcagtagtaacttctggttcaaataccccaag
acaagctcaaagattgaacactttgtgtccattctcggacgatgctttgagtctccgtgg
actacaaaggctttgtccgagacagcctgtgaggattctgaggagaacaaacagagactg
actggcaccacttcagcaccgaaacaggtatcacaggaaaataaagacgaaaattctgcc
aacacatctactcctatgcttggcaatacaggagtcaagttctcagcagataagcccgtt
gctgaggccccaagtatgactatcctggacaagaaagatggagagcaggccaaggctctt
tttgagaaggtgagaaaattccgtgcccatgtggaggacagcgatttcatctacaagctc
tacgtagctcagaccgtggtcaaaacggtcaagttcattttgattctgtcatatacgtca
acttttatggctgccatcgactttcgccacaaatgtgagcccgatatcaaacacttaact
ggatataagcagttcttttgtacccacaacatggctttcatgctgagaaagctcctcctc
agctacatggccctcatattgatctatgggatggtgtgcttgtattccctccactggctt
ttcaggcgcccccttaaagagtactcatttgagaaagtcagagaggagagtagcttcagt
gacattcctgacgtgaagaacgactttgcgttccttctgcacatggtcgatcagtacgac
cagctgtattccaaacggtttggtgtcttcctctcagaggtcagcgagaacaagctgagg
gagatcagtctgaaccacgagtggacatttgagaagctcagacagcttgtgacccgaaat
gcccaagaccagcaggagctccacctcttcatgctctctggtctcccgaatgcagtgttt
gacctcaccgacctggaaatacttaaactagaactaattcctgaggtcaggttttcggca
aaggtttcccaaatgaccagtctgcatgagctgcacctctgccactgccccgccaaagtt
gagcagacagcctttgtctttctccgtgaccacctccgctgccttcacgtcaagttcaca
gatgtcgctgagatccccacatgggtttatttgttgagaagtttgagggagcttaacttg
gtaggcaatttaagctcagaaaacaacaaaatgataggactagagtccatgcgagatttg
aaacatctaaagacattgtatctgaagagcaacctcaccaagatgccttcaagcctcaca
gagctgtccccacacctgatcaaactggtggtgcacaatgatggtactaaactactgcta
ctgaacagcctcaagaagatgacaaaccttgccgatctggagctgcacaactgtgagctg
gagaggatcccccatgctattttcagcttaaccaaccttcaagagctagacctcaaatcc
aacaacattcgcaccattgaggagatcatcagctttcagcacctcaagaggttgacctgc
ctcaaactgtggcacaacaaaatcatcaccattccagcctccataggccaggtcaagtgt
ttggagtcacttcaccttttgcacaacaaactggagacgctcccgccagcgctgttccac
ctccccaagctgaggcacctggatgtcagtcacaactccatcacagtgatcccgccggat
gtgggtctcctgcagaacctccagcacttcgccattaatgcaaacaaggtggaggtgctg
cccaagcagctgttcaggtgcaccaagctgaaggtcctgtgtctgagcaacaatggcctc
accaccctgcctgagatggtgggtcagttggtgcagctcgctcagctggagctgagggga
aactgtctggaccgccttccctcgctactggggaactgccgccttctacgtaaaaactgc
ctcattgtcgaggaccacctttttgacactttgcccatagatgtaaaggaaagcctcagt
cgggagaccaatgtgtcctttgcgagtggcttatag
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