Coregonus clupeaformis (lake whitefish): 121535028
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Entry
121535028 CDS
T08357
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121535028 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121535028 (rpap2)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121535028 (rpap2)
Protein phosphatases and associated proteins [BR:
cclu01009
]
HAD phosphatases
Fcp/Scp phosphatases
121535028 (rpap2)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121535028 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
121535028
NCBI-ProteinID:
XP_041697638
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All DBs
Position
21:19423360..19443503
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AA seq
674 aa
AA seq
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MTSMENQPRKRVARSSKPGKKDGKSVKAQTVAEEARRREAVRETLREKLDLEKRALQVVE
SLLEDSVAEDFLVDCARLITSANYKDTVEERSIVKLCGYPICSNKLGKVSRQQFKISTKT
NQVYDITERKSFCSNFCYKASKSFELQISKSPLWLRQHESPPDVKLMKKGNGGSTGEEVR
LVERRLREEDVENPLPLDSEAPQGTRRSPTAGHSDDSDTEQDFVSSVVSQRQGPRVHWGD
LPKCTAEGEGREPGEGEDRERRSGAKDTKVPKQIQTNKAEEKEEENTEESQKALTKTSNG
TDGPQQHTTATNHPSDQQPFLGERGSPEGQSIEEAADLMSQVTIQDRDPAPSPAPTAHSG
QNQEPAPTPTPQGDPTPEQPTQPGINIIQVGMSRRGAQGLQGLLKGHEAGTKPVSVRLNL
LEGLRRTFNEWTTQETMKFLYGPDHFSKTLIETKKVEKEEELDEDDLEDIVEGGGEGGET
ESQGGPGRPSAPAPDYDTLRRETEEMGLRVREFYKGMEEVHRVSGKQHARGGDSENQGGA
LPLVDSHAQHLIQKRITVEKLTRGLRDIVGHLRLTMTDVSSDLNKLVRTFRFTNTNIIHK
GPEWTLIAVVLLHLLSEVSPVVREALESPASVEYLSTLMQELPLQDQDLQSLVQLLKTPA
LCPHAHIEKQQTNQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatggagaatcagccacgaaaaagagtcgctcgctcttcaaaaccaggcaaa
aaggatgggaagagtgtcaaagcacagaccgttgcagaggaagcaagaaggagagaggca
gtgagggagaccctgagagaaaagctggatctggagaagagggcactgcaggtggtggag
tctctcctggaggacagcgtagcagaggacttcctggttgactgtgcaaggttgatcact
tctgccaattacaaagacacagttgaggagagatccattgtgaagctgtgcggttatcct
atctgttcaaataaactgggcaaggtctccaggcaacagttcaaaatttccaccaaaacc
aatcaagtgtatgacatcacagaacgcaagagcttctgcagtaacttctgctacaaagcc
tccaagtcctttgagctgcagatatctaagagccctctatggttgaggcagcacgagagc
cccccagatgtgaaattaatgaagaaaggaaatggcggtagcactggagaggaggtgagg
ctggttgagaggcgtctcagagaggaagatgtggagaacccccttcccctggactctgag
gccccacagggcaccaggcgctcccctacagccggtcacagcgacgacagcgacaccgaa
caggactttgtctccagcgtggtctcccagcgacagggacccagggtgcactggggtgat
ctgcccaagtgcactgccgaaggggagggtagggaacctggagagggggaggacagggag
agaaggtcgggagcgaaggacacaaaggtgcccaagcaaatacaaacaaataaggcggaa
gaaaaggaggaggaaaacacagaagaatcacagaaagcactaacaaaaacaagcaatggc
acagatggaccccaacagcacacaacagctacaaaccaccccagtgatcagcaacctttc
ctgggagagagaggctcgccagagggccagtctatagaggaagccgcagacctaatgagc
caagtcacaatacaggatagagacccagctccatctcctgcaccaacagcccacagtgga
cagaatcaagaaccagctccaacccccaccccacagggggatccaaccccagaacagccc
acccagcctggcatcaacattatacaggtgggcatgagcagaaggggagcacaggggctc
caggggctcctcaagggccacgaagctgggactaaacctgtctcggtccggctgaacctt
ctagaaggcctaaggaggaccttcaacgaatggacgactcaggagactatgaagttccta
tatggcccagaccactttagtaaaacactgatagaaacaaagaaggtggagaaggaagag
gagctggatgaagatgacttggaggacattgtggagggtggtggggagggaggtgagact
gagtcccaagggggtccaggaaggccctcagccccggccccagactacgacaccctacgc
agggagacagaggagatggggctgagggtgagggagttctacaaagggatggaggaagtc
catagggtgtcagggaaacaacatgccagaggcggagactcagagaaccagggtggtgcg
ctcccattggttgactcccatgcccagcacctcatccagaaacgcattacggtggagaag
ctcactagaggcctgcgagacatcgtgggtcatctgcgtctcaccatgactgatgtctcc
agtgacctcaacaagttggtcaggaccttcagatttacaaacaccaacatcatccacaaa
ggcccagagtggaccctgattgcggtggtgctcctccatttgttatcagaggtatccccg
gtggtgcgggaggccctggagagcccggcctcagtagagtatctctctactctgatgcag
gagctcccactgcaggaccaggacctacagagcctagtccagctactcaaaaccccagcc
ctctgtccacacgcacacatagagaaacagcagacaaatcaatga
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