KEGG   Coregonus clupeaformis (lake whitefish): 121535041
Entry
121535041         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121535041
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     121535041
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     121535041
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121535041
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5
Other DBs
NCBI-GeneID: 121535041
NCBI-ProteinID: XP_041697657
LinkDB
Position
21:complement(20074649..20102861)
AA seq 1192 aa
MASDSGPQTPSSKGIMTFHPTAEEFQNFSRYIAYMESQGAHKAGLAKIVPPKDWKPRKSY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVREFRKTTNSDKFCSPRYADFEELER
KYWKNVTFNPPIYGADVNGTLYDPDVTDWNIGKLNTILDTVEHESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGAPKSWYCVPPEHGKRMERLAQGFFPGSHQNCEAFLR
HKMTLISPSILRKYGIPFEKITQEPGEFMVTFPYSYHAGFNHGYNCAESTNFATERWIEY
GKQAILCSCRKDMVKISMDLFVKKYQPDRYEQWLAGQDTGSIDHSQPTPEAKEFLEEDQG
KDCISHEPCVEELNTEGERKSPTQRIGTKRHRVCLDVPDEVVPKDEEEDEEYGKKARLGL
STQGTGAEDCEDTVTLRDLPNVKTDPMQGNSSRSPAPQKVTIPSTSNHAAAILAQPQSHR
NGHLPGVAPPARTGPSTHPIRKLGVASLLFHKTQSPKEALQVHSYARENQQQIHHTHLHV
HSYAREHLPRHLQPHLQLKPKPQAQVKAEQQESHVPSTKGEQNQAEAQSPCKGEQVETKV
QTQGLDKWRQHPGEAQAWEERSEARSPSSPEPVQTQAHNRAAKRVEAEVRRDRRKQCLSP
VQAELTLMKQTNLCPNKPTILRPSKLTNLSPSKQTDSSQSKQTQSSSSKQTECKSKPHPL
LRKLPKQHPLLRTRESSSDDDELCVDMEDEPEEKEEWAKPLAQLWQSRPYNPQAEREYNK
LMGLQAPYCSICLLFHTYDQSESSGNPSYILKGRRGGRQRSKPLIPEMCFSTTNDKTNNS
SSSEGEGQLSTPHLEEDGTSLLVSCSQCCVRVHASCYGVSADQVSDEWMCARCEANALTE
DCCLCSLRGGALQRANNDKWVHVLCALAVLEARFVNITHRNPVDLSYIPLARFQLKCFYC
KRRVKRDVGCCVQCSHGRCTTAFHPTCAQAAGQLMQPDDWPFIVHVTCYRHKSLVLPERN
KAVMRELEVGQNVICKHKNGRYYQCEVLELTIATFYEVVFDDGSYSDNLFPEDIENRDCV
KLGPPTVGDVVQVRWTDNLLYGAKFVASHSIPMYQMEFEDGSSLSAKREEVYSLDEELPK
RVKSRMSKASDMRFDGIFTEKEVKQGSKRQRVINSRYREDYIEPLIYRAIME
NT seq 3579 nt   +upstreamnt  +downstreamnt
atggcgtccgattcggggccgcagactcccagctccaaagggatcatgacctttcacccc
actgctgaggagtttcagaacttcagccgctatatcgcatacatggagtcccagggagca
cacaaagctggtctggctaaaatcgtgccaccgaaggattggaaacccaggaagtcctat
gacgatatagatgacttggtgatcccagctcccatccagcaggtcgtgacgggccagtca
ggtctgttcacccagtacaacatccagaagaagcccatgaccgtccgagagttccgcaag
acgaccaacagcgacaagttctgcagtcctcgctatgccgactttgaggagctggagagg
aagtactggaagaacgtgacctttaacccgcccatctacggggccgatgtgaacggaact
ctctatgaccctgatgtgacagattggaacatcggcaaactgaacaccatcctggacacg
gtggagcacgagagtggtataaccatcgagggggtgaacacgccctacctgtactttggc
atgtggaagaccaccttcgcctggcacaccgaggacatggacctctacagcatcaactac
ctccactttggagcgcccaagtcctggtactgtgttcctccagagcatgggaaaagaatg
gagcgcttggctcaagggtttttccctggaagccaccaaaattgcgaagccttcctgagg
cacaagatgaccctcatctctccctccatattgaggaaatatggcattccatttgagaaa
atcactcaggagccgggtgagttcatggtgacgtttccctatagctaccacgccggattt
aaccatggctataactgtgcagagtccaccaactttgcaactgaaagatggattgagtat
ggaaagcaagccatactgtgttcgtgcaggaaggatatggtgaagatctccatggacctg
tttgtgaagaagtaccagccggaccgctacgagcagtggctggcagggcaggacacaggg
tccattgaccactcacaacccaccccagaggccaaggagttcctggaggaggatcagggg
aaggactgcatctcccatgagccctgtgtggaggagctcaacacggagggggagagaaag
agccccacacagaggatagggaccaagaggcaccgggtgtgtctggatgtacctgacgag
gtggtccctaaagatgaagaagaggacgaggagtatggaaagaaagccagactaggcctc
tccactcagggcacgggagcagaggactgcgaagatacagtcaccttgagggacctccct
aatgtaaagacagaccctatgcagggcaacagcagcagaagccctgctccgcaaaaagtc
acaatcccctccaccagcaatcatgcggcagccattttggctcaaccccagtcgcacaga
aacgggcaccttccaggagtggctcctccagccaggaccggcccctccacccatccgatc
agaaagctaggggtggccagcctgctctttcataagacccagagccctaaggaggccctg
caggtccacagctacgcccgcgagaaccagcagcagattcaccacacccacctccatgtg
cacagttacgccagggagcacctgccacggcacctccaaccccacctgcaactcaagccc
aagccccaggcccaagtcaaggccgagcagcaggagtcccatgtcccatctaccaaagga
gagcagaaccaggccgaagcacagagtccctgtaagggagaacaggttgaaaccaaagtc
cagacccaaggcctcgataagtggcggcagcatcctggcgaggcccaggcttgggaggag
aggtccgaagccagatcccctagcagtccagagcccgttcagacccaagcacacaacagg
gcagccaaaagggttgaggcggaggtccgaagggacaggcggaagcaatgtctttcccct
gtgcaggcggagttaactttaatgaagcagacaaacttatgtccaaataagccaacaatc
ttacgtccaagtaagctgacaaacttaagtccaagtaagcagacggactcaagtcagagt
aagcagacgcagtcaagttcaagtaagcagacggaatgcaagagtaaaccgcatcctctc
ctccgcaagctgcccaaacagcacccactactcaggaccagggaaagctccagtgatgac
gatgaactgtgtgtggacatggaggatgaaccagaggagaaggaggagtgggccaagccc
ctggcccagctgtggcagagcagaccttacaacccccaggcggagagggaatacaacaaa
ctcatgggcctgcaggccccctactgctccatctgcctgcttttccacacatatgaccag
tcggagtcaagcggcaaccccagctacattctaaaaggccggcgcgggggcagacagagg
tccaagcccctgatcccggagatgtgtttcagcaccaccaatgacaagacgaacaacagc
agcagcagcgagggcgagggccaactttccacccctcacctggaggaggacggcaccagc
ctgctggtcagctgctcccagtgctgcgtccgcgtccacgccagttgctatggagtgtct
gcagaccaagtgtcagatgagtggatgtgtgcccgctgtgaggccaacgctttaactgag
gactgctgcctgtgttcactgcgagggggagctctacagagagccaacaacgacaagtgg
gtgcatgtgctgtgtgcgctcgcggtcctggaggcgcgcttcgtgaacatcacccaccgc
aatcctgtagaccttagctacatccccctggccaggttccaactgaagtgtttctactgt
aagcggcgggtgaagagggacgtgggctgttgtgtgcagtgttcccatggccgctgcacc
accgccttccaccccacctgcgcccaggccgctggccagctcatgcagcccgacgactgg
ccgttcatcgtccacgtcacctgctacaggcacaagtcgctcgtcctgccagagcgcaat
aaagcggtcatgcgagagctggaggtgggccagaatgttatttgtaagcacaaaaatggc
cgctactaccagtgtgaagtgctggagctgaccatcgccactttctacgaggtcgtcttc
gacgacggctcctacagcgacaacctcttcccagaggacattgagaaccgggactgcgtg
aagctgggcccgccaacagttggtgacgtagtgcaggtgcgctggaccgacaacctgctt
tacggggccaagtttgtcgcgtcgcactccatccctatgtaccagatggagtttgaggac
ggatcgtcgctgtctgccaagagggaagaagtctacagtctagatgaggaactgcccaaa
cgagtcaagtcccgaatgtccaaggcgtcagacatgcgcttcgacgggatcttcacagag
aaggaggtcaagcagggctccaagagacagcgagtcatcaactcccgttacagagaggac
tacatcgagcctctcatatacagagctatcatggaataa

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