Coregonus clupeaformis (lake whitefish): 121535047
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Entry
121535047 CDS
T08357
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121535047
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121535047
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
121535047
NCBI-ProteinID:
XP_041697666
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Position
21:complement(20370424..20425908)
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AA seq
970 aa
AA seq
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MRHRYAGAVYQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTLHYLNHHQLP
CLSKPSRRGIHACQPQHGEPPPLTSYNIAQRPSHRVCEPAGQPAHLQQNRWAAAGSQPQS
EQPVFQSCHCSFSEEASLSHQRQPLAHPPQPSPSLPPSSSLLFLQESNHGDHFQSSAKYQ
QASIVERCRGGGGGGGGHRDQKQLLQQQQQHSRLQHRDRDPSPEATRANSQKGRTIHVCE
SIEANRRAFESQTQGLQQLQQLPQLRAQQQLLVGSSLPINYCANGSGELCRNNQAPLLQQ
HQQQQDALGRPQHCDQDRNKPGRTNQVNQPQHPSQPQHHCRDSRVNPPTQPYGSSASATG
TSSKSSPNYGSSYHLWPESPHKGEERILIDHHQQATTEQKKLSHAGSKPSLSESSGRLPQ
IAMNTCKYNGGVVKPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKAS
NESLVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWG
VYGKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIV
LELLVCAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSK
LFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDT
QEVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLE
LTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQA
IHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLD
SVTGSLQALPCLISQAITQQQQEFLDSFLQRFRPASLGSERSERSERSWTSTARRRRSPS
TAPHTSSDSG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccaccttgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcggagaggtatccatgcctgtcagccgcagcacggcgagccc
ccgcctctgacaagctacaacatcgcccagcgaccttcacaccgggtctgtgaacccgcc
gggcagccagcacacctgcagcagaaccgttgggccgcagccggctcccagccgcagtcg
gagcagcctgtttttcagagctgccactgcagtttttccgaggaggcgagcctttctcac
cagcgccagcccctcgctcacccgccgcagccctccccatctttgccgccgtcgtcctct
ctgctgtttttgcaggaatctaatcacggggatcatttccaaagcagtgccaaataccaa
caggcgagcatcgtggaacgctgccggggaggaggaggaggaggaggagggcaccgagac
cagaagcagttgttgcagcaacagcagcagcacagcagactccaacacagggacagggac
ccctcccctgaagcaacccgagcaaactcgcagaaagggcgcactatacatgtatgtgag
tcaatcgaggctaaccggcgagcattcgagtcccagactcagggcctgcaacagctacag
caactcccacaattgcgagctcaacaacagctactagtggggagcagcttgcctatcaac
tactgcgccaacggttcaggagagctatgtcggaataaccaggcaccactgctgcaacag
catcagcagcagcaagacgcactggggcgtccgcagcactgtgaccaagaccgcaataag
ccggggaggacgaaccaagtcaaccagccacagcaccccagccagccgcagcaccattgc
cgcgactcccgtgtaaacccaccaacgcagccgtacgggtcgtctgcgtctgcgactggc
actagcagcaagagcagccctaactacggctccagctatcacctgtggcccgagagcccg
cataagggagaagagaggatactcatcgatcatcatcagcaggcaaccactgagcaaaag
aagctgagccatgctggatccaagccctccctctccgagagcagcggccgactccctcag
atagccatgaacacctgcaagtacaatggcggcgtagtgaaaccactgggcagcctggcg
tcgtcgcggcgcaacctagcagagctcgactccgagacacagcccctccagacgctgcac
agctctggcctggaggtggtggtttccaagggcaacggcgaggaccccagtaaggcgtcc
aacgagagcttggtcagggacgggaacggtgctcccgtgaagaagaacaaggacatcggc
tataggctcggccaccggagggcgctctttgagaagcgaaagagactcagtgactacgcg
ctcatcttcgggatgtttgggattgtcgtcatggtgacggagacagaactgtcctgggga
gtttacggcaaggaatcgtcgtactcatttgcactgaaatgccttatcagcctttccact
gttatattgcttggtcttataataatgtaccatgcccgggaaatccagctgttcatggtg
gacaatggggctgacgactggaggatagccatgacatacgaacgcatcttcttcatcgtg
ctggagctgctggtgtgcgccatccaccccatcccgggccattaccgcttcacgtggacg
gcgcggattgccttcacctacacgccgtcgacggccaacgccgacgtggacatcatcctc
tccatccccatgttcctgcgcctctacctgatcggccgtgtcatgctgctgcacagcaag
ctcttcacggacgcctcgtcgcgcagcattggcgccctcaacaagatcaacttcaacacg
cgcttcgtcatgaagaccctcatgaccatctgccccggcaccgtgctgcttgtcttcagc
atctcctcctggatcatcgccgcctggacggtgcgcgtctgcgagaggtatcatgacaca
caggaagtgaccagtaacttcctgggagccatgtggctcatctctattaccttcctctcc
attggctatggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttaca
gggatcatgggagcgggttgcactgcgctggtggtcgccgtggtagccaggaagttggag
ttgaccaaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacga
gtaaagaacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaag
ctggtcaagaagatagatcacgctaaggtgcgcaaacaccagcgcaagtttctacaggcc
atccatcaagctcagaaactacgcagtgtgaagatggagcagaggaaactcaacgatcaa
gccaacacgctagtggacctggctaagacccagaacgtgatgtacgacctggtgtcggag
ctgcaggagcgcagcgaggagctggacaagcgcatcggcatgctggaggacaagttggac
tcggtgacgggcagcctacaggcgctgccctgcctcatctcccaagccataacccagcag
cagcaggaatttctggacagtttcctgcaacgcttccggcctgcctcgctgggatcagag
cgctccgaacgttcagagcgctcctggacatccaccgcccgccggcgccgctcgccctcc
acggcgccacacacctcctctgacagcggctag
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