Coregonus clupeaformis (lake whitefish): 121535063
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Entry
121535063 CDS
T08357
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03010
Ribosome
cclu04120
Ubiquitin mediated proteolysis
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
121535063
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121535063
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121535063
04137 Mitophagy - animal
121535063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cclu03011
]
121535063
04121 Ubiquitin system [BR:
cclu04121
]
121535063
Ribosome [BR:
cclu03011
]
Ribosomal proteins
Eukaryotes
Large subunit
121535063
Archaea
121535063
Ubiquitin system [BR:
cclu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121535063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
121535063
NCBI-ProteinID:
XP_041697691
LinkDB
All DBs
Position
21:complement(21051798..21053853)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccttgacgggtaaaaccatcacccttgaggtggaacccagt
gacaccatcgagaatgtgaaggccaagattcaagacaaagaaggtattcctcctgaccaa
cagcgactcatctttgctggcaaacagttggaggatggccgcacattgtcagactacaac
attcagaaagagtccacacttcatctcgtcctgcgtctgagaggaggtatcatcgagcct
tccctgagacagctggcacagaaatacaactgtgacaaaatgatctgccgcaaatgctat
gcacgtcttcacccccgcgcagtcaactgccgcaagaagaagtgtgggcacaccagcaac
ctgcgccccaagaagaagctcaagtaa
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