Coregonus clupeaformis (lake whitefish): 121535080 Help Entry 121535080         CDS       T08357                                  Name (RefSeq) roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121535080    04121 Ubiquitin system [BR:cclu04121]     121535080 Transcription factors [BR:cclu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     121535080 Ubiquitin system [BR:cclu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     121535080 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 CE2_N zf-RING_6 RING_XB3-XBAT31 Motif Other DBs NCBI-GeneID:  121535080 NCBI-ProteinID:  XP_041697720 LinkDB All DBs Position 21:21920968..21961699 Genome browser AA seq 1098 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVPKVQPVALITSPEDSQHYEEARQCVEELALYLKPLSNTRGVG LSSTTLSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEEGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLVARLPGSSSLLSDDGLSLDMGVTRKPS PLTNGSAVPSMPQLIARGTDLVTYNLLRKPKMDGGSNSAPGSPPDSLDSGPKQGYPHAIG YSRGPGDHMSMPKQMPGSVVPQMYPQQQLPEMYYSDSRPPPSASQYEPSQYPQGYPYQQP PQYAPQRYIRNPPPPGDPAGPPYQDPGYGPPDRPYPAPHSGPPFSYPPPPHYDTRGRHGP YPGPPPPPQPYPSQRDDMVRMSPAPLEGPPYHQEQAARERFPPEGYYPPVAQPQTMRTYV REQYGRSSQPSLDYLHHRRKELMAQLEERKVISPPPFAASPTLPHTFPSDYPQEYGEESS KAFGKYREPDYAGQYSPWSCDTIVSYIGTKDSKPKDVMAPGAMEMMNVDGKGRRGEPSME AQVRRGTEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPMQASAQGHNPKHMAIAA EYSYGNHGGWGGASYPSHQTGSSSQGHFSERLPMPTQDREQLKTELQQVNQQINQQSQIH GMELSQPGQNQGQQGGKWPGSSSAASVSSEQLSMELHQVEREIGKRTREIAMDSQVPHEV QYKKKTAENGQQDHKAQLEEIALALGEVSNGSSGLGQSGGVGGAMLSLTTKASSLSLCSE PGPGGSELQKNGVVHSCS NT seq 3297 nt NT seq  +upstreamnt  +downstreamnt atgcccgtgcaagccccacaatggacagagttcctgctgtgtcccatctgcactcagacg ttcgaggagacggtgcggcggcccatctcgctgggctgtggtcacacagtctgcaagatg tgcctgaacaagctgcaccgcaaggcctgccccttcgaccagacggccatcgccaccgac atcgagcagctgcctgtcaacacagccctgctgcagctggtggggggacaggttcccaag gtccagccggtggccctgatcaccagcccagaggactcgcagcactatgaggaggccagg cagtgtgtggaggagctggccctctacctcaaacccctcagcaacaccagaggggtgggt ctgagcagcacgaccctgagtatgctgagtcgacccatgcagaggaagctggtgaccctg gtccactgtcagctggtggaggaggagggccgggtgcgggccatgagggcagctaggtct ctgggggagcgcacggtcacagagctcatcctgcagcaccagaacccccagcaattgtca tccaatttgtgggccgccgtccgggccaggggctgccagttcttgggcccagccatgcag gaggaggctttgaagctggtgctgctggctctggaggaaggctcagccctgtccaggaag gtcctggtactgtttgtggtccagcggctggagccacgcttcccccaggcctccaaaacc agcataggccacgtggtgcaactcctttacagggcctcctgctttaaggtgaccaagcgt gacgaggactcgtcgctgatgcagctgaaggaggagttccggacgtacgaggcactgcgg cgcgaacacgactcccagattgtccagatcgccatggagggcggcctccgcatcgcccct gaccagtggtcctccctgctctatggggaccagtcacacaagtcccacatgcagtccatc atcgacaagttgcagacgccggcttcgtttgcccagagcgtccaggagttgaccatcgcc ctgcagaggacgggcgaccccgccaaccttaaccgccttcgaccacacctggagctcctg gccaacatcgaccctagccccgatgccccccctcccacgtgggagcagctggagaagggt ctggtggcggtgaagacggtggtccacggcctggtggacttcatccagaaccacagcaag aagggagctgacccacagcagcccccccagcacagtaagtacaagacttacatgtgtcgg gatatgaagcagaagggaggctgtccccgaggagccagctgtaccttcgcccactctcag gaggagctggagaagtaccgtaaaatgaacaagcgtttggtagctcgcctccccggctca tctagcctgctgtctgacgacggactctctctggacatgggggtgacccggaaaccctcg cccctcaccaacggctcagccgtaccctctatgccccagctcatcgctcgtggcactgac ctcgtgacctacaacctgttgcgcaagcccaagatggacggtgggagcaacagcgccccg ggatcaccccctgactctctggactctgggcccaaacaagggtacccccatgccattggc tactccagggggccaggcgaccacatgtccatgcccaaacagatgcccggtagcgtggtg ccccagatgtacccccagcagcagctacctgagatgtactactccgactctcgccccccg ccctctgcttcgcagtacgagccctcgcagtatccccaaggttacccctaccagcagccc ccccagtacgccccccagcgctacatccgcaacccccctccccccggcgaccccgccgga cccccctaccaggaccccggctacggcccacccgatcgcccttacccggccccccactcg ggccctcccttttcctaccctcccccaccccactatgacacccggggccgccacggccct taccccggcccccctcctccccctcagccctacccctcgcagagggacgacatggtccgg atgagccccgcgcccctggaagggcccccctaccaccaggagcaggctgccagggagagg ttccccccagagggatactacccaccggtggcccagccccaaaccatgaggacctacgtc agggagcagtacgggcgctcctcccagcccagcctagactacctgcaccaccgccgtaag gagctgatggcccagctggaggagaggaaggtcatctctcccccacccttcgctgcttcg cccaccctccctcacaccttccccagcgactacccccaagagtatggggaggagagctcc aaagcctttgggaagtacagggagccggactacgcgggccagtactctccctggtcctgt gacaccatcgtctcctacatcggcaccaaggactccaagcccaaagacgtcatggcgccc ggcgccatggagatgatgaatgtggacggtaaaggtaggcggggggagccctccatggag gcccaggtcaggcgggggacggaggtgaaggacgacgaccccatcatccccttcggcccc cagcccactgtgtcgcgcttcggggccatctcacgcacctccaagacaggctaccagacg acaggccccatgcaggcctccgcccagggacacaaccccaagcacatggccatagccgcg gagtactcctatgggaaccacggaggctggggcggagcctcctacccctcccaccagact ggctcctcctctcagggacacttcagtgaaaggctgcctatgccaactcaggacagagag cagctgaagactgagctccaacaggtcaaccagcagatcaaccaacagtcccagatccac ggcatggagctctcccagccaggtcagaaccagggccagcagggggggaagtggcctggt tccagcagcgctgcctcagtgtccagcgaacagctcagcatggagctccaccaggtggag agggagatcggcaagaggacccgcgagatagccatggacagccaggtgcctcatgaggtc cagtacaagaagaagactgctgagaatggccagcaggaccacaaggcccagctggaggaa attgcgctggccctgggtgaggtgtcgaatggctccagtggtctagggcagagcggcggt gtgggcggagccatgctgtcactgaccactaaggcgtcatcgcttagcctgtgttctgag ccagggcccgggggctcagagctgcagaagaacggtgtggtccattcctgctcctag

DBGET integrated database retrieval system