Coregonus clupeaformis (lake whitefish): 121535094
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Entry
121535094 CDS
T08357
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121535094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121535094
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
121535094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
121535094
NCBI-ProteinID:
XP_041697741
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Position
21
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AA seq
642 aa
AA seq
DB search
MAELRLDSDSHLQYGPFGSDLADICIDPDGEWDINLFEELENLSDAEELLQEFEFSPHNK
TTWKEVNDINLLQWRSFASGDTDACCTGVGVPGSSLSPGSALSDTSSLSPLSLKQEDAVS
MQPLPTMLTPQRVSIQPKPPPSVPLTHPVAPFLKTRTIVIQPVGLQTVVSVVKAPSPVTV
HATAPSTAGHTMHLKPRQLIGPQIASPAPALLTVTNQVVTMPTVPHHVTMGTTVLSGPAH
PMTVTYHNTAVDTEVCAVRRQQRMLKNRESATLSRLRRKEAQQALEARLKGALCENQRLL
RENGSLRTQLEGLLTENTVLKVTAPKRRAVCLMVVLVFFVLNTGPISVWESEPSNFSLST
GKPQSSRHLLSFSPDQQLRSGEETPAPQSPLEPLDAQYPQSHQSQDSRWEDYTPEEMALA
VVKKEPLLFGSPSSPPCQSHSPVSRSKSLRLAQNLRGWVHRHEEERTKSTRSTTDQSRHT
TTDQHTTKTVLKSPEERPQTNQSSNSVVTVRYSDRPGREVQVYYSRHQSYRDFFDELNRR
GDTFYVVSFRRDHLLLPATNHSKGSRPKMSLVLPAINVNDSVIKDNTFEVMMQIDCEVMD
TKILHIKTSTIPEFLRANTTDFQSTHANGKAAASVGVLSDSA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttacggttggattcagacagtcatttacagtatggcccttttggcagcgat
ttagcggatatttgcattgatccggatggtgaatgggacatcaacctgtttgaagaactt
gagaacctaagtgatgcagaggaactccttcaagaatttgagttctcaccacataataaa
acaacatggaaagaggtgaatgacattaatctgttacaatggagatccttcgccagtgga
gatactgacgcttgctgcacaggtgttggagtgcctgggtcctccctatcacctggatct
gcactcagtgatacctcctcactgtcaccactgtccctgaaacaggaggatgctgtgtct
atgcagcctttgccgactatgctcactccccagagggtgtccatccagcccaaaccgccc
ccctctgtccccctcacacaccctgtggccccttttctcaaaaccaggaccattgtcatc
cagcctgttggcctacagactgtggtctcagtggtcaaggcaccatcacctgtgacggtc
catgctactgccccctctactgcaggtcacacaatgcatctcaagccgagacagttgatt
ggaccacagatcgcttccccagcccctgccctcctcactgtcaccaaccaggtggttacc
atgccaaccgtcccccatcatgttaccatggggaccactgtcctctctggcccagcccat
cccatgacggtgacctatcacaacacagcagtggacactgaggtgtgtgcggtgcggcgg
cagcagaggatgttgaagaaccgtgagtcggccacactgtccaggctgaggaggaaagag
gcccagcaggccctggaggcccgtctcaagggtgcactgtgtgagaaccagaggctgctc
cgggagaacggatccctcagaacccagctggagggactgcttactgagaacactgttctg
aaggtgacggctccaaagagacgagctgtgtgtctcatggtcgtcctggtcttcttcgtg
cttaacactggtcccataagtgtgtgggagtcagagcccagcaacttcagcctgtccact
gggaagccacaaagcagccgacatctgctcagcttctcccctgaccaacaactgaggagt
ggggaggaaacaccagccccccagtccccactggagcccctggatgcccagtacccacaa
tcccaccaatcccaggacagtaggtgggaggattatactccagaggagatggctctagct
gtggtcaagaaggagcctctcctgtttgggtcaccctcctcgcccccctgccaatcccac
tctcctgtctctaggtccaagtccctccgtctggctcagaacttgcgaggctgggttcat
cgacacgaagaggagaggaccaagtccacacgttcaaccactgatcagtccagacataca
acaactgatcagcacacaaccaaaactgtcctgaagtcacctgaggagagaccccagacg
aaccagtccagtaactcggttgtaacagtccgctactctgatagaccagggagggaggtt
caggtgtactactcacgccatcaaagctacagggacttctttgatgagttaaatcgacga
ggcgacactttctacgtggtgtcctttcgcagggatcaccttctgctccctgcaaccaac
cacagcaaggggagcaggccaaagatgtccttggtgttaccagcaattaatgtgaatgac
tctgttatcaaggacaacacatttgaggtgatgatgcagattgactgtgaggtcatggac
accaagatcctccacatcaaaacctccaccatcccagagttcctacgtgccaacaccact
gacttccaatccacccatgccaacggaaaggcagcagcttcggttggtgttctatcagac
tctgcctga
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