Coregonus clupeaformis (lake whitefish): 121535109
Help
Entry
121535109 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family D member 3-like isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
cclu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121535109
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121535109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121535109
Enzymes [BR:
cclu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
121535109
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
121535109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SMC_N
AAA_23
BrxL_ATPase
AAA_21
AAA_27
AAA_29
Rad17
Toxofilin-like_dom
AAA_5
Motif
Other DBs
NCBI-GeneID:
121535109
NCBI-ProteinID:
XP_041697769
LinkDB
All DBs
Position
21:complement(23456216..23467622)
Genome browser
AA seq
659 aa
AA seq
DB search
MAAISKYLTAKNSSIAGATIVALYLLKRRSHAAQLNGGKRSSELQLSKDDAKKEKTVVDK
VFFARVLKIVKIMVPGVFCKESGYCLLIAAMLVARTYCDVWMIQNGTMIESAIIGRSTKD
FKRFLFNLIKVMPFISLVNNFLKLGLNELKLCCRVRLTKHLYDEYLQGYTYYKIGNLDNR
IGNPDQLLTQDVERFCNSVVDLYSNVSKPLLDIGLYIFKLTSAIGAQGPACMIGYLMFSG
LILTRLRRPIGKMTVMEQRYEGEYRFVNSRLITNSEEIAFYNGNLREKQTIHSTFQKLVD
HLHNFIVFRFSTGFVDSIIAKYIATVVGYLVVSRPFLNHTHPRHLHSTHAELLEDYYQSG
RMLLSMSQALGRIVLAGREMSRLSGFTARITEIMKVLKELNSGKYERTMVSQQGGRDSES
QDRITLVPGSGEIINKDKIIKFEHTPLATPNGDILIKDLSFEVTSGTNVLVCGPNGCGKS
SLFRVLGELWPLFGGRLTKPERGKLFYVPQRPYMTLGSLRDQVIYPDTVEDQRRKGTSDK
VLKEYLDNVQLGHILEREGGWNTVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSA
VSVDVEDFIYSHCRTVGITLFTVSHRKSLWKHHEYYLHMDGRGSYEFKPITQETVEFGS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatcagtaaatacttgacagccaagaactcctctatagcaggtgccacaatc
gttgccttgtatcttctcaagaggagaagtcatgcagcccagttaaatggggggaaaagg
tcatcagaactacagttgagcaaagatgatgccaagaaggaaaagacggtggtggataag
gtgttctttgcacgtgtcctgaagatagtgaagatcatggttcctggagtgttctgcaaa
gagtcaggatactgtctcctcatcgctgccatgctggtggccagaacctactgtgatgtg
tggatgatccagaatggaaccatgatcgagagtgcaattattggtcgttcaacaaaagat
ttcaagaggttcttgttcaacttgataaaagtcatgccatttatctcgctagtcaacaac
ttcctgaagctgggcctgaatgaactgaagctctgctgccgggttcgactcacaaagcac
ctctatgatgagtacctgcaaggttacacatactataagattggtaacctggacaaccgc
atcggtaaccctgaccagctgctgacccaggatgtggagaggttctgtaacagtgtggta
gacctctactccaatgtcagcaagcctttattggacattggtctgtacatcttcaagttg
acctcagccatcggggcacagggtcctgcctgtatgataggctacctgatgttctcgggg
ctcatcctgacacgcctgcggaggcccatcggcaagatgacggtgatggagcagagatac
gagggagagtaccgattcgtcaactctcgcctcatcaccaacagtgaagagattgccttc
tacaatggaaacctgagggagaagcagaccattcactctaccttccagaaactggtggat
catttgcacaatttcattgtcttccgcttttcaacgggtttcgtggacagcatcattgct
aaatatattgccactgttgtcgggtacctggtggtgagcaggccgttcctgaaccatacc
cacccacgccacctacacagtacccacgctgagctgctagaggactattaccagagtggg
cgtatgttgttgagcatgtctcaggccctgggcaggatcgtcctggctggcagggagatg
agcaggctctcagggttcactgctcgcatcaccgagatcatgaaggtactgaaagagctg
aactctgggaaatacgagaggaccatggtctctcagcagggaggcagagatagtgaatcg
caagatagaatcaccctggtcccaggaagtggtgaaatcatcaacaaagacaagatcatc
aagtttgagcatacacctcttgcaacgcctaatggggacattcttatcaaagacctcagc
tttgaggtgacgtcagggacaaacgtcttggtgtgtggccccaacggctgtgggaagagc
tcactcttcagagtcctgggagagctctggcctctgtttggtggccgtctcacaaaacct
gagagagggaagctcttctacgtcccccagagaccatacatgaccctaggctctctgagg
gatcaggtgatctatccagatacagtggaggaccagaggaggaaggggacctctgataag
gtgctgaaggagtacctggacaacgtccagctaggtcacatcctggagcgggagggcggc
tggaacacggtccaggactggatggacgtcctcagtggaggagagaaacagaggatggct
atggcccgtctgttctaccataagccccagtttgccatcctggatgagtgcaccagtgct
gttagtgtagatgtggaggacttcatctacagccactgtaggacggtgggcattacgctg
ttcacggtttctcacaggaagtctttgtggaagcaccatgagtactacctgcacatggac
ggaagggggagctatgagttcaaacccatcacccaggaaacggtggagtttgggtcataa
DBGET
integrated database retrieval system
