Coregonus clupeaformis (lake whitefish): 121535116
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Entry
121535116 CDS
T08357
Name
(RefSeq) choline transporter-like protein 5-A isoform X1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121535116
04147 Exosome [BR:
cclu04147
]
121535116
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
121535116
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
121535116
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
QCR10
Motif
Other DBs
NCBI-GeneID:
121535116
NCBI-ProteinID:
XP_041697781
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Position
21:complement(23658240..23779827)
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AA seq
744 aa
AA seq
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MRHKYTCDTTSIVARVSLDSYEKDMRPLIVTRVTALMTAQTASSATTGEPRKFDPTFRGP
ISNRSCTDVFCCVIFIIIILGYIALGTVAWLHGDPRKVIYPTDSYGQFCGQKGTPNAKKS
ILFYFNILKCANPAVLINLQCPTTQMCVSKCPDRFATYTDMQLQYQITAAPWEYYRQFCK
PGFNNPTKPVAQVLRDEDCPSVIVPSRPFLQRCFPDFITLNGTLTVAKRTHFKDALDTAR
GVTELRDAANGITGLVDAKEVGMKIVEDYATSWNWILIGLVIALVVSLIFILLLRFTAGL
LLWFTIIAVILVIAYGIWHCYLEFSLLRQQPGADVTIVDIGFQTDVTVYLHLSQTWLIFL
ISLGTIEASILIILIFLRKRLRVAIALLREGSKAISYIMSTLFYPIITFLLLAICISYFA
VTSVFLASSGDAIYKVMAAEPNCMYGNKTCDPETFNKTNVSKTCPGAQCTFAFYGGETPY
HRYLFILQLSNLLIFLWLVNFTIALGQCTLAGAFASYYWARRKPQDIPTCPLFSSFSRAI
RYHTGSLAFGALILALVQMARIILEYLDSKLKGVNNVVARFLLCCLKCCFWCLERFIKFM
NRNAYIMIAIYGKCFCTSARDAFCLLMRNVVRVAVLDRVTDFLLFLGKVLIAGSVGVIAF
FFFTHKIPIVQEDVPTLHYYWVPLLTVIFGSYLIAHGFFSVYAMCVDTLFLCFCEDLERN
DGSPEKPFLMSAELHSILRKTEHH
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacaagtacacttgtgacaccacctccattgttgcaagagtctccctcgactcc
tatgaaaaggacatgaggcctctgatagtgacccgagttactgccctgatgactgcccag
acggcttcatcagcaacgacaggagaaccacgcaagtttgacccaacattcagaggacca
atcagcaacagaagctgcacagacgtgttttgctgtgtgatcttcatcatcatcatcctt
ggatacatagcactggggactgtggcgtggctacacggtgaccccaggaaggtgatctac
cctacagacagctacggacagttctgtgggcagaagggcaccccaaatgcaaaaaaatcc
atactgttctacttcaatatcctgaaatgtgccaaccctgctgtcctcatcaacctacag
tgcccgaccactcagatgtgtgtttccaagtgcccggacagatttgcaacctacacagat
atgcagttgcaataccaaatcactgcagccccctgggaatattacaggcagttctgcaaa
ccaggattcaacaacccaacaaagcctgttgcacaagtgttacgagacgaggactgtcca
tcagtgattgtgcctagcagaccattcctacagcgctgttttcctgacttcatcactctg
aatggaaccctgacggtggccaaaagaacccacttcaaagatgccctggacacagcccgc
ggtgtgactgaactaagagacgccgccaatggcatcacaggtctggtggatgctaaggag
gttgggatgaagattgtggaggactacgccacctcatggaactggatcttaataggtctg
gtgatagctctggtggtcagtctgatcttcatcttgctgttacgtttcactgccggactc
ctcctctggttcaccatcatcgccgtcatactggtgattgcttacgggatatggcactgt
tacctggagttctccctcttgaggcagcagcccggggcagatgtgaccatcgtagacatc
ggcttccagacagacgtcacggtttacctgcatctcagccagacatggctcatcttcttg
atatctctgggtaccatagaggcctccatcttgatcattctgatctttctgaggaagaga
ttacgggtcgctatcgctctactgagagagggaagcaaggccatcagctacatcatgtca
acactcttctacccaatcatcaccttcctgctgctggccatctgcatctcctactttgct
gtcacctctgtattcctggcctcctctggagatgccatctataaagtaatggctgctgag
cccaactgcatgtacggaaacaagacatgcgatcctgagactttcaacaagaccaacgtg
tccaagacgtgtccgggcgcccagtgtacatttgcgttctacggcggggagacgccctac
caccgctaccttttcatcctccagctgtccaacctgctcatcttcctgtggctggtcaac
ttcaccatcgccctgggccagtgcaccctggctggggccttcgcctcctactactgggcc
cggaggaagccccaggacatccccacctgccccctgttttcttcatttagcagggcaata
cggtatcacacgggctcactggcgtttggtgctctaattctggcccttgttcagatggca
cgaattatcctggagtatctagattcaaaactcaaaggtgtcaataacgtggtagcacgc
ttcctgctctgctgcctcaaatgctgtttctggtgtctagagcgcttcatcaaattcatg
aacagaaatgcttacattatgattgcgatatatgggaagtgcttctgcacgtcagctcga
gacgccttctgcctattgatgagaaatgtagtaagggtggcggtgctggacagagtgaca
gacttcctactgttcctggggaaagtgctaatagcagggagtgtaggcgtcatagccttc
tttttcttcacacacaaaataccaattgttcaggaagatgtgccgaccttgcattactac
tgggtacctctactgacggtgatatttgggtcctatttgatcgctcatggattcttcagc
gtctatgcaatgtgtgtggacacgctgtttctgtgtttctgtgaggacttggagaggaac
gatgggagccctgagaaacccttcctcatgtctgctgagctgcacagtattctgagaaaa
actgagcaccactga
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