Coregonus clupeaformis (lake whitefish): 121535148
Help
Entry
121535148 CDS
T08357
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121535148
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121535148
Surveillance factors
Other surveillance factors
121535148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
121535148
NCBI-ProteinID:
XP_041697842
LinkDB
All DBs
Position
21:complement(25064676..25091141)
Genome browser
AA seq
1404 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSSVATSPPLSPALPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGVGPVG
PGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEESHAESIFSPSR
GDRRFEKPGRKESDVAPAHFPMNHIRANYEEVGTGMGGLPVRKHDFTRSESENWRTSRDE
VNGEDGDEGGWRLAGAPRRDSDRWCPPSPDGLRSAGRREAHPGEQPRQRRFPFDAREDER
GYRRPRSGSGSLEEDGGSLPEWCLEDAEEETGTFDSSGAFLSLKVRKAPKEPILEEAELD
FRPLEECDEGLEEDRQPRETKDSDGEARREPDRKQDVGRGVEEAPPAPSTPEPQPPAPLL
PPSQPDRAEEPERPLERPPAPEHRPEANKVPLHVPMSMPMSNTMLESLPIPHTAAHTLTV
SPVSAPSSTIQMQQKPLDVPVAMPATLPFSASLMAQSTSIMAPNIMAPSTPIGRPTVMPP
HHTMDEDERLKHFEQEAEKMVAYLQDSDDRLAAKSSVHKPAGLPLTHEAALKWFYKDPQG
EMQGPFSNPEMTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFASGPAPPPLLG
DAGDQERLKLQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALNSAPHQQQQQQQQ
QINLLLQQYQALKMRSAEHTTSESLLPPVTRSMSVPDSQGSVWEMQNPSSQASCTPNIQQ
PAPSAWEGSSVWDLPIDSMAQAPTIEQMQQLEKNKAAKVSPPHQLELERREAELRAKREE
EEEEEEERKRLEEALRARQEEERKRVEDELARHKQEEELRRQREQEEAQRRQMEEEERQA
QEEALRRLEERRREEEEERKQREEFLRKQEEERRKQEELEALRRREEEKRLEEEEAAVAL
ARQQQEEAKRREQEAVRQQELARQRQQLQEALRRLQQQQQQQQLAQMKLPSSSKWGQQSA
VTAAAISQSQNALSLAEIQKVEEERERQAREEQRRQLAEHLKLQQQQALQESLQPQAKLS
GWGSVAKQPATTKSLLEIQREEAQQVKQRKEQGGGGQQPSHPTVTQQNRAQNRAVSHSLA
TALSSSVWGSVATSSVGGGAPNWGGESSSIWGDSTNSNMGFWDEAAQPPPQAPPPARKPS
AQKNNKANANLSSRANKKVEEEEKLLKLFQGVNKSQQDGFMQWCEQTLHTLNTANNLDVP
TFASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKHFLERRAKQKVNQQKEPQVPQNQQPT
LKQRPQQQCDSISQDSVWSGTGSQSLYQSNHTSLQQQSRFETVTSGKKKKKQKMVRADPS
LLGFSVNAASERFNMGEIETVEDF
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaacttcggaccagaatggctccgggccctgtctgggggt
ggccatgggggtggtagcagcagtagcgttgccacctcaccacctctctcgcctgcattg
ccaaagtataaacttgcggactaccgctacgggagagaagaaatgctagcactttatgta
aaggatagggagatccctgtagatctacatgataaggattttctgccaattttacaagag
gagcccctgccaccactggcacttgtagcttttacagaggaagagcagagaaatttctcc
atgtctgtaaacagtgcagcggtgctcaggctgatgggaagaggagtgggtccagtgggg
ccaggggcaccgaggggtcgaagtacttcacggggcagaggacggggtagaggagacgga
gggttttaccaaagaagttttgatgacgtggagggaggctttggccgcggaggcagggag
atgcaccgctcccagagctgggaggagagtcatgctgagtctattttctccccatctagg
ggagacagaaggtttgaaaagccaggtcgaaaagagtcagacgttgctcctgcccacttc
ccgatgaatcatatccgtgctaactacgaggaggttgggaccggcatggggggcctgcct
gtgaggaagcacgattttacacgatcggagagtgagaactggcgtacgtcccgcgacgaa
gtgaatggtgaggacggtgacgaggggggctggcgcctggcgggtgccccacgacgggac
agcgaccggtggtgccccccgagtccagacgggctgcggtcggcagggcggcgagaggcg
cacccgggggagcagccacggcagcgccggttcccgttcgacgccagagaggacgagcgt
ggctacaggcgtcccaggtcgggcagcggcagcctggaggaggatggtggtagcctgcca
gagtggtgcctggaggacgctgaggaggagacgggcaccttcgattcctccggagccttc
ctctcgctcaaggtccgaaaagctcccaaggagcccatcctggaggaggcagagctggac
ttcagacccctggaggagtgtgatgagggcctggaggaggacagacagccccgggagacc
aaagactcagacggagaggcaaggagagagcccgacagaaaacaggatgtggggagaggg
gtagaggaggcgccgcctgctccctcgactccagagccccagccacccgcccctctgctg
ccccccagccagcccgacagagcagaggagcctgagaggccacttgagcggcccccagcc
cccgaacacaggccagaggccaacaaagtccccctgcacgtccccatgtcgatgcccatg
tccaacacaatgctggagtccctccccatcccccacactgcagcacacactctcacagtg
tctccagtgtcggccccgtcgtccaccatccagatgcagcagaagcccctggacgtgccc
gtggctatgccggccacgctgcccttcagcgccagcctcatggcccagagcacatctatc
atggcccctaacattatggcccccagcacgcccattggaaggcccacggtcatgccgcca
caccacaccatggatgaagatgagagactgaagcactttgaacaggaggcagagaagatg
gtggcgtatctacaggacagtgacgaccggctggctgccaagagctcagtacacaaacca
gctggcctgccgctcacacacgaggctgctctgaagtggttttataaagacccccaggga
gagatgcagggtccattcagtaacccggagatgacggaatggttccaggcaggctacttc
accatgaccctgctggtgaagagaggctgtgacgaggtcttccaacccctgggggagatc
atcaaaatgtggggcagggtccccttcgcctccggaccagcaccgccacccttactgggt
gacgctggggaccaggagcgtctgaaactgcagcaggagctgacggccctcaacctgtac
cagctgcagcagctgcagtaccagtacctgttgaggcagcagtacgcccaggccctggcc
cagcagaaagcccaggcactaaactcagcaccacaccagcagcagcagcaacagcaacag
cagataaacctgctcctccagcaataccaggccctcaagatgaggtcagcggaacacaca
acatctgagagtctcttacctcctgtgacgcggtccatgtctgtaccagactcccagggt
tctgtgtgggaaatgcagaacccctcctctcaggcctcttgcacaccaaacatccagcaa
cctgcccccagtgcgtgggagggcagcagtgtgtgggatctgcccatagactccatggcc
caggcccccaccatagaacagatgcaacagctggagaagaacaaggctgctaaggtctct
cctcctcatcaactggagctggagcggcgtgaggcggagctgagagccaagagggaggag
gaggaggaggaggaggaggagaggaaaagactggaggaagcgttacgggcccgacaggag
gaggaacgcaaacgcgtggaggacgagctagcacgtcataaacaggaggaggagttgagg
aggcagcgggagcaggaggaggcacagcgcagacagatggaggaagaggagcggcaggca
caggaggaggccctccgcagactggaggaaagaaggcgggaggaggaggaagagcggaag
caaagggaagagttcctccgtaaacaggaggaggagcgccggaagcaggaggagctggag
gccctgaggaggcgcgaggaggagaagcggctggaggaggaggaggccgcggtggcattg
gcacggcaacagcaggaggaggcgaagaggagggagcaggaggcggtgaggcagcaggag
ctagccagacagaggcagcagctgcaggaggcgctccgccgactacagcagcaacagcag
cagcaacagctagcccagatgaagctgccgtcgtcctctaagtggggccagcagtcagca
gtcacggcagcagccatctcccagtcccagaacgccctgtcgctcgctgagatccagaaa
gtggaggaggagagggaacgacaagcacgagaggagcagcggcgccagctagcagagcac
ctgaagctccagcagcagcaggccctgcaggagtccctgcagccccaggccaagctctct
ggttggggcagcgtggccaagcagccggccaccaccaagtccctgctggagatccagagg
gaggaggcccagcaggtgaagcagaggaaggagcaggggggtgggggccagcagcccagt
caccccaccgtcacccagcagaaccgcgcccagaacagagctgtgagtcactcgttggcc
actgctctgagttcctcagtgtggggctcggtggccaccagcagcgtgggaggcggggct
cctaactggggcggggaaagtagcagcatctggggcgacagcaccaactccaacatgggc
ttctgggacgaggcggcccagcccccgccacaggccccaccccccgccaggaagcccagc
gctcagaagaacaacaaggcaaacgccaacctcagcagtagggccaataagaaggtggag
gaggaggagaagctgctgaagttgttccagggggttaataagagccagcaggatggcttc
atgcagtggtgtgagcagaccctgcacaccctcaacaccgccaacaacctggatgtcccg
acatttgcgtctttcctgaaggaggtggacagtccgtacgaggtgcacgactacgtgcgc
gcctacttgggggacacgtctgaggccaaggagtttgccaagcacttcctggaacgccgt
gccaagcagaaggtcaaccaacagaaagagccccaggtcccacagaaccagcagccgact
ctcaagcaacgaccgcaacagcagtgtgactccatttcccaggattcagtgtggagcggg
acgggctctcagtctctgtaccagtcgaaccacaccagcctccagcagcagtcacgtttc
gagacagtcacctcagggaagaagaagaaaaagcagaagatggtccgggcagaccccagc
ctgctaggtttttctgtgaatgcggcatctgagaggtttaacatgggcgagatagagacg
gtggaggacttttaa
DBGET
integrated database retrieval system
