Coregonus clupeaformis (lake whitefish): 121535156
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Entry
121535156 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121535156
00071 Fatty acid degradation
121535156
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121535156
09143 Cell growth and death
04216 Ferroptosis
121535156
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121535156
03320 PPAR signaling pathway
121535156
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121535156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121535156
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121535156
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121535156
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121535156
Exosomal proteins of breast cancer cells
121535156
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121535156
NCBI-ProteinID:
XP_041697868
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All DBs
Position
21:26535463..26576443
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLLSGAGANLDRARRVKARSVSGRPAGPYR
ATNREDGSQLKLVSSLHPGVDTLDKVMEHGAARFPERNCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETYQSAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKAILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNMDAVQELGSRPDNMAVVRRQPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGVTGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCIAHGCCIGYSSPLTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYS
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLVCSEITLKDWEEGGYYSTDKPHPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLMVLAEQRGLRGSWEEICNNPDMERDVLRIITEA
ALSAKLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKALKSHYQDDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccgctgctgctgcaggtcttccgctcggttgtctgg
gtctactctgtcatcaccttcctgccctggtacctgctctcgggcgctggagccaaccta
gaccgggcacggcgggtcaaggcacggtcagtgagcggtcgtccggcgggcccttaccgg
gcgaccaaccgtgaggatggaagccagctgaagctggtgtcttccttgcacccaggagtg
gacaccctggacaaggtgatggagcacggggcggccaggttcccagagaggaactgcctg
ggcacgagagaggtgctgagcgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctgggggagtatcagtggatgtcgtacgaggagacctaccagtcagcagtg
tgttttggcagtgggctggcagcgctgggccagaggcctcagtgtaacattgccatcttc
tgtgagaccagggctgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccattgcccacggtctgaacgagact
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggccattctg
ttggaggtgcctcggctgcagcacatcatcgtggtggacagtaagccaaccagttggccc
ggcttcccccgtggcatcatggtccacaacatggacgccgtgcaggagctgggctccaga
cctgacaacatggcggtggtgcgccggcagcccctgccctctgacatcgctgtcatcatg
tacaccagcggctccacgggcatccccaagggcgtcatgatctcccatagcaacatcatc
gcgggcgtcacaggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctaccactggcccatgttctggagctgagtgcagagatggtgtgtatcgctcac
ggctgctgcatcggatactcctccccactgacgctagcagaccagtcgactaagattaag
aagggcagtaaaggagacaccagtgttctaaaacctacactcatggctgctgtaccggag
atcatggatcgtatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctgtttgtgttggcctacaactataagatggaacagatcaccaagggctacagc
accccgctctgtgacagtctggtgtttaggaaggtgcgctcgttgttggggggtcacatg
cgggtgctgttgtcaggcggagcgcccctatccgctgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccaaggctacggcctcaccgagacctgtggcgctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggagctcctctggtctgctccgag
atcaccctcaaggactgggaggagggcggttactacagcacagacaagccacacccaaga
ggggagattgtaatcggcgggcccaacgtgactatgggttactacaagaacgaggtgaag
aaccgtgaggacttctttgtggacagcaacggccagcgctggttctgtacgggagacatc
ggggagtttcacccagatgggtgcctcaagattatcgaccgtaagaaggacctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgcgcctacgcaaacagtgaccagtcgtacgtgattggctttgtg
gtgcccaatcagaagcagttgatggtgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccccgacatggagagagacgtcctccgcatcatcacagaggcc
gctctgtcagccaaactggagcgctttgagatccctaagaagatccgtctgagtgcagag
ccctggaccccagagactggcctggtgacagacgcattcaaactcaaacgcaaggcactc
aaatcacactatcaggacgacatcgagagaatgtacggcggcaagtaa
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