Coregonus clupeaformis (lake whitefish): 121535180
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Entry
121535180 CDS
T08357
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121535180
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
121535180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NCOA
PAS_11
SRC-1
DUF1518
Nuc_rec_co-act
NCOA_u2
DUF4927
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
121535180
NCBI-ProteinID:
XP_041697907
LinkDB
All DBs
Position
21:28478225..28549915
Genome browser
AA seq
1530 aa
AA seq
DB search
MSSTGENTPDPAARGESLKRKECGPDLLGPSPKRSTEKPNREHENKYIEELAELIFANIN
DIDNFNVKPDKCAILKETVKQIRQIKEQEKTTTANAEDVQKADVSSTGQSVIDKDALGPM
MLEALDGFFFVVNMEGNIVFVSENVTQYLLYNQEELMNTSVYSILHVGDHAEFIKNLLPK
SLVNSRAPRSSENPNRNSHTFNCRMLVNPHGPEERGEQEPKDQEVQQKYETMQCFAVSEP
KSIKEEGEDFQSCLICVARRVPIKERPMLPTYESFTTRQDLQGKITSLDTSLLRASMKPG
WEDLVRRCIQRFHLQNDGEMSFAKKHQQEVLRQGHAFSPLYRFSLSDGTIVSAQTKSKLV
RSPATNEPQLYMSLHILQREQTICGMNPDMSGQGQGQGQGMGKQPMNTMSSLPPPSVVGL
SPGLGVQGQDTMVSSNTNMAALQGGRYGCHGTMNRTPTPQGCSNYALKMGMNSPSQGSPS
VTSQGGQGGGGTMLSPRHRQSPSVAGSPRVPPPGPFSPTGSLHSPPGVGNSHGGYTGNSS
LNALQALSECHRVSQGQSSGSPDRKPSNLLQMQSPPGSGGASSSNNPISRQLANRSSTSE
REMEMFGAYGEQSQPDGEDGEQRESKDGTPEPFGGGGPGGELIEAQNRLLNSKGHTKLLQ
LLTNKSEHMEPCSPHGAPGGGDPNCKDPGTGPGGHNNHSSSLKEKHKILHRLLQNSTSPV
ELAKLTAEATGKDLSQDQGVPDSMATSVAEMATKQEPVSPKKKDNALLRYLLDKDDNTMQ
EKGIKMEPGTEMKLANVKTEKHDPGYNMADQSSELEDILDDLQCSQQRQLFSGQHHHQQQ
QSRPVSLPANVDKQSIINDILQMTENNSSPTGTNTQQKAFPGMGPGHFNGPRMGQPGRGP
PVRSMSLDQSNMSANGSPRPFPPHRNSSPYSVMQQQAMMGNHGMLQNQANMGNAGMPRAG
MQQGWGPQGPIGQALQQRMGPDGRMVPNVSAGVPMRPSNQQPGPRQMVAMQMMGNVQSEM
EMAGPPYPGQQAPPNQTAPWPDRMMSVDHGLYGNQNRQAYVNPQEEALCPPSRPGEGPSD
GDALLSQLYSVLKDFDGLEEIDRALGIPTLVSQGQPVEQEQYPSQESPMMKPPMYSQHYP
QAGSMAQGNYMGQQDPGFHGMPGLMGQRMGYPMLRLPARPGGPVPAQPNNLRLQLQHRLQ
AQLQNRQPMMNQMGVSNMNLPLRPSVPNQGTLNAQMLAQRQREYLSNHLRQRQQHVHQRA
MLMRAQGLTIPPNMATAAGAVGPSQSPGMPPSSMPASMGTNPRIPQANPQQFPYPASYGT
GLSSPPPSTSPFSPLSPGLPGAQQLLSPLHSSPIPHGSSQMSLANQQGMMGNVGGQFGAA
VSPQMQQHSAFQFPSSGMNQQQQDAGFIGATTPQSPVMSPRMSHTQSPMMQQQNQANSSY
QPSSEMNGWPQGNMSGNSMFTQQSQQYVPQQPNSGMYNDGNANPNMSGVPMASNANGSMS
NMNQMSAGQMTMTSVPTESLSSMGPEQNYC
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacgggggagaacacccctgaccctgctgccaggggagagtccctgaagcgg
aaagaatgtggcccggacctcctggggcccagccccaagcggagcacggaaaagccaaac
cgggagcatgaaaacaaatacattgaagaactggctgagttgatctttgcaaacatcaac
gacattgacaacttcaatgtcaagcctgacaaatgtgcaatcttgaaagaaactgtgaag
cagattcgtcaaataaaagagcaggagaaaacgactactgccaatgcagaggatgtacag
aaagcagatgtctcgtcaacaggccaaagcgttattgacaaagatgctcttggaccaatg
atgctcgaggccctagacgggttcttctttgtggtgaacatggaggggaacattgtgttt
gtgtcagagaacgtgacccagtacctgctgtataaccaggaggagctgatgaacaccagc
gtctacagcatcctgcacgtaggagaccacgctgagttcatcaagaacctgctgcccaag
agcctggtgaacagcagggcaccgcggtccagtgagaaccccaacaggaatagccacacg
tttaactgccgcatgttggtcaacccccacgggcccgaggagaggggtgagcaggagccc
aaggaccaggaggtgcagcagaaatacgagaccatgcagtgtttcgccgtgtccgagcca
aagtccatcaaagaggagggagaagatttccagtcttgtctgatctgtgtggcacgaagg
gttccaatcaaagagaggcccatgctcccgacatatgagagctttaccaccaggcaggat
ctccaaggtaagatcacatcactggacaccagtctgttgagagcctccatgaagccaggc
tgggaggacctggttaggaggtgcatccagaggttccacctgcagaacgacggggagatg
tcctttgcaaaaaagcatcagcaagaagtcctgagacagggccatgcattcagccctctg
tatcgcttctccctgtctgacggtaccattgtgtcggcccagaccaagagcaagctagtg
cgctcccctgccaccaatgaaccacagctctacatgtccctccacatcctccagagggag
cagacaatctgtgggatgaacccggacatgtctggccagggacaaggacaaggacagggg
atggggaagcagccaatgaacaccatgtcctcgctgccccctcccagtgtggttgggctg
tcccctgggctaggggtccagggccaggacacaatggtcagcagcaataccaacatggcc
gccctgcagggtggacgttacggatgccatgggactatgaaccgaacccccactcctcag
ggttgcagcaactatgcactcaagatggggatgaacagcccgtcgcagggcagccccagt
gtgacctctcaggggggtcagggtggcggtggtaccatgctgtctccacgccaccgccag
agccccagtgtggcgggtagcccccgggttcctcccccaggacccttctccccgacgggc
agccttcactctccgccaggggtagggaacagccacggtggctacactggtaacagctcc
ctcaacgcacttcaggccctcagcgaatgccacagggtctcccaggggcagtcctcaggg
tcacctgacaggaagccaagcaatctgctgcagatgcagagtccccctggtagtggtgga
gccagcagcagtaacaaccccatctccagacagctggccaaccgcagcagcacgtctgag
cgagagatggagatgtttggagcgtacggagagcagtcccagccagacggggaggatggg
gagcagagggagtcgaaagatggcacccccgagcccttcggaggaggagggccgggagga
gagctgattgaggcccagaacaggctcctcaacagcaagggccacaccaagctcctgcag
ctgctcaccaacaagtcggagcacatggagccctgctcgccccacggggcccctggggga
ggggaccccaactgtaaggaccctgggacggggccaggtggccacaacaaccactcctcc
tcgctgaaggagaaacacaagatcctccacagactcctccagaacagcacatccccggtg
gagctggccaagctgacggcagaggccacggggaaggacctgagtcaggaccagggagta
ccagacagcatggccaccagcgtggctgagatggccaccaagcaggagcccgttagcccc
aagaagaaggacaatgcgctgctgcgctacctgctggacaaagacgacaataccatgcag
gagaaaggcatcaagatggagccaggaacagagatgaagctggccaacgtgaagacggag
aagcatgacccgggatacaacatggcagatcagtctagtgagctggaagacatcttggat
gatctgcagtgtagccagcagcggcagctcttttcaggccagcaccaccaccagcagcag
cagtccagacccgtgtctctgcccgccaacgtagacaagcagtccattatcaacgacatc
ctgcagatgaccgagaacaacagcagtcccacgggcaccaacacccagcagaaggccttt
ccaggcatgggcccaggacacttcaatggtcccaggatgggccagccaggacgagggccc
cctgtccgcagtatgtccctggatcagtccaacatgtctgccaatggttctccccggccc
ttccctcctcacaggaacagcagcccctactctgtcatgcagcagcaagccatgatggga
aaccacgggatgctgcagaaccaggctaacatgggcaacgcaggcatgccccgggctggc
atgcagcagggttggggtcctcaggggccaattggccaggctctgcagcagagaatgggg
cctgatggtcgcatggtgcccaacgtctccgctggagtccccatgaggcccagcaaccag
cagcctggacccagacagatggtcgccatgcagatgatgggaaacgtgcaatcagagatg
gagatggctggtcctccctacccagggcagcaggcaccgcccaatcagactgccccgtgg
cctgaccgcatgatgtctgtagaccatggactttatgggaaccagaacagacaggcgtat
gttaacccccaggaggaggcgctgtgtcccccatcgcggcctggggaggggccctcggac
ggggacgccctgcttagccagctctactcagtgctgaaagactttgacggcctggaggag
attgaccgcgccctgggaatccccactctggttagtcagggccagccagtggagcaggag
cagtatcccagtcaggagtcgcccatgatgaagccacccatgtacagccagcactacccc
caggctggcagcatggcacagggcaactacatgggccagcaggaccctggcttccacggt
atgcccggtctgatgggccagcggatgggctaccccatgctccgactccctgcccgacca
ggaggcccggtgcccgcccagcccaacaacctgaggctgcagctgcagcaccgactacag
gcacagctgcaaaatcgtcagccaatgatgaatcagatgggcgtgtccaacatgaaccta
cctctcagacccagtgtacccaaccagggaacccttaatgctcagatgttggcccagaga
cagagggagtacctgagtaaccacctgcggcagcgccaacagcacgtccaccagagagcc
atgctgatgcgggcccagggcctcaccatcccccccaacatggctacagcggctggggca
gttgggccctcgcagtcccccggcatgccccccagctccatgcctgcctccatgggcacc
aaccctcggatcccccaggcaaacccccagcagttcccctacccggccagctacggtact
gggctctcttccccaccgccctccaccagccccttctccccgctgtcccctggtctcccg
ggggctcagcagctcctctcccctctccactcctccccgatcccgcatggctcctcccag
atgagtctggctaaccagcaagggatgatgggaaacgtaggcggacagtttggagccgca
gtgagtccacaaatgcagcagcacagtgccttccagtttcccagctcaggtatgaaccaa
cagcagcaggacgcaggcttcataggagccaccaccccccagagccctgtcatgtcccct
cgcatgagccatacccagagccccatgatgcagcagcagaaccaggccaactcctcctac
cagccctcctctgagatgaacggctggcctcagggcaacatgtcaggaaacagtatgttc
acgcaacagtctcagcagtacgtgccccaacagcctaacagtggaatgtacaacgacggc
aacgccaacccgaacatgagcggtgtccccatggcctcaaacgccaatggaagcatgagc
aacatgaaccaaatgtcagcaggccagatgaccatgacctctgtgcctacagaaagcctg
tcctccatgggccctgagcagaactattgctaa
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integrated database retrieval system
