Coregonus clupeaformis (lake whitefish): 121535184
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Entry
121535184 CDS
T08357
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121535184 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121535184 (vcpip1)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121535184 (vcpip1)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C64
121535184 (vcpip1)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
121535184 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121535184
NCBI-ProteinID:
XP_041697925
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All DBs
Position
21:28709152..28714771
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AA seq
1186 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEMKKANSNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIK
LEQDGSCVIGGDRSLQDKYLMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGVIGVQP
EEVTEAARKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCCYDPERDILIPDYKLSSLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEMNVDLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAHRVTDVVETQQAVDTQP
PTKIILTGQKSKTIHKEELTMSKAERSLQQSISEQALVTQKRRTDRLKQKGQGRPPSPSA
AQEPSSSSAPATPTKSSSSPTASKEKKIRVTTSDGRQAMLTLQAQTTFSDLQRSIANEFT
VPPAQQCIRHGFPPKELFPPKDGEENEPVALQHGDRVTVEILRGPEDRKASAPSASSSYS
SLHSLLSVKSDDPVTSSRMNTSRELQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLFHQ
GGVFYNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEERLELCVDAAGHFPVGPDVEDLVK
EALVQLHSEAASRSREGSPSHSMLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPGGSPP
EHKPITRQHSSGVDLSASASKGPDLSDISEDATKKLVRMAPGFVTMKDSRHLDPSMIEEQ
RKKLQEMVSSIQASMDRHLREQSNAGADTGGPAERTSGAKMSASQSAPGAGDKEASSMDV
STAGAHGTPVEAGNMPDGKYAESEELEEMDSQDAEHTNALEPMDHS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacaaggctccaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccaaaatgccaggcgaggctattcttccctgcttacggctcgattagcattgaatgc
actgagtgtggccaacgccacgaacagaataatcttttaaatgtggaagaagtaactgat
ccagacgttgtgcttcacaatttgttaagaaatgccttacttggtgtcactggggccccg
aagaagggaaccgagctggtgaaagtgatggggctttccaactaccattgcaagctcctc
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgcgg
gaaatgaatcaaggagaaatgttcgactgttcacttctaggagacagggcgtttctaatt
gaacaggagcatgtatctacagttggctatggcaaggacagatccgggagcctgatatac
cttcatgacactttggaggagatgaagaaagcgaacagcaacaaagaatgcctaattcct
gttcatgtggatggagatggacattgccttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgcgttgagagagaatttgaaacaacatttcaaacaaaacctg
gatcgttacaaggcactctttcaggattttattgatgcagccgaatgggaggacatcatc
aacgaatgtgaccctctgtttatcccaccggagggtgtgccactgggacttcgaaacatt
cacatattcggcttggccaatgtgctgcaccgccccataatcttgttagattcactgagt
ggaatgaggagctccggggattactctgcaacttttctcccagggctcgtgccggaagag
cagtgcaaaggaaaagatgggaagttcaacaagcctatatgcattgcctggagtagctca
gggcgtaaccactacatccctctcgtcgggataaagaacactctcctccccaagctgcca
ccaaggctactccccaaggcctggggagtgccacaggagctcatcaagaagtacataaag
ctggaacaagacgggagctgtgtcattgggggagacaggagcttacaagacaagtatctg
atgagactggtcaatgccatggaggaaatcttcatggagaagcatggcatccacccctcc
cttgtggcagacgtgcatcagtacgtttacagacggaccggtgtgatcggtgtccaaccc
gaagaggtgacggaggctgccaggaaatcagtcatggaaaaccggctacatcgctgtctg
atctgcaatgcactctctgagcttcatgttctacctgagtggctggctccaggtggtaag
ctctacaacttggctaaatccacccacgggcagctcagacctgacaagaactacagcttc
ccgctgaacaacgtagtctgctgttacgaccctgagagggacatcctcattcctgactac
aagctgagctctttgaacacctgcaactggtgccatggcacctcagtgcgccacatccat
ggcaacggctctgtggtgtatctggatggagacagaaccaacacccgctcccaggggggc
aaatgtggctgtggctttaagcactactgggagggaaaggagtacgacaatctgccagag
gctttccccatcactctggagtggggtgggcgagtcgtgcgggagactgtgtactggttc
cagtatgagatgaatgtggacctgaacagcaacgtgtatgatgttgccatgaaactggtc
accaagcatttccctggggagtttgggagtgagctcctggtgcagaaagtggtgaacacc
atcttacatcacactgccaaaaagaacccagacgagtataacccagtctccattgacggg
gcgcatgctcacagggtcacagacgtagtggaaacccaacaggctgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcacaaagaggagcttacg
atgagtaaggcagagcggagccttcagcaaagcatcagcgagcaggccctagtgacccag
aagaggaggacagatcgactgaagcagaagggacagggcaggccaccctccccaagtgct
gctcaggaaccttcttcctcctccgccccagccacgcccaccaaatcctcctcctccccc
actgccagtaaggagaagaagatccgtgtaaccactagcgatgggcggcaggccatgctc
actctacaggctcagaccaccttctccgatctccagaggagcattgctaatgagttcacc
gtgcctccagcccagcaatgtatccgacatgggttccctcccaaagaacttttccctccc
aaggatggagaggagaatgagcctgtggccctccaacacggggacagggtgactgtggag
atcctgagaggtccagaggaccgcaaggcatccgccccaagcgcttccagttcctattca
tccctgcattccctcctctctgtgaagagtgatgatccagtgacttccagcagaatgaat
actagcagagagctgcaggacaatattgaccttgagatgtcctccctctgtctcctagca
accttaatgggagaagatgtctggtcatatgccaaaaaactgcctcacttattccaccaa
ggtggagttttctacaacattgtgaagaaagatatgggcctgatggatggcaagcactgc
accctcccacacctgactggaaagacgtttgtttacaacgcagcagaggagcgtctggag
ctgtgtgtggatgcagctggacatttccctgtgggccctgacgtggaggacctcgtcaag
gaggccctggtgcagctccactctgaggctgcctccaggagtcgcgagggaagcccctct
cacagcatgctgaggctcgggagtggaggtgtggtgcgcaagaaggagcagctccagagt
gtcaacgccttccagggtaagggccactccctgggcagcgccccaggcggctctccccct
gaacacaagcccatcaccaggcagcacagcagcggggtggacctgagcgccagcgcctcc
aagggacccgacctctctgacatctcagaggacgcgaccaagaagctggtgcgcatggct
cccggttttgtcaccatgaaagacagccgacacctggaccctagtatgatcgaagagcag
aggaaaaaactacaggagatggtctcatccatccaagcctccatggacaggcacctgaga
gagcagagcaatgcaggggcagacactgggggccctgcagagaggacaagtggggctaag
atgagtgcttcccaatctgccccaggggcaggcgacaaggaggcctcttcaatggacgta
tctactgctggtgctcatggcacaccagtggaggcagggaacatgcctgatggaaaatat
gcagagtcagaggagctggaggaaatggatagccaggatgcagagcataccaatgccctg
gagccaatggatcattcctga
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