Coregonus clupeaformis (lake whitefish): 121535224
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Entry
121535224 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121535224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121535224
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121535224
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121535224
NCBI-ProteinID:
XP_041698000
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Position
21:complement(15424362..15516667)
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AA seq
648 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPTGINNTLANVTRSL
VTVAAEVAVEVVNKTKRTSPSEEYWKHYVLQISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIIRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVICIPIYALYKIGKSEGTTFLERLKNSCKPDMKWGPALSEHRIG
LYATPGSDGEVEVCPLKEKEKEDEKRDEISLTIQGSNGSTAHNTTPST
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagccgaccagaatggagctgttccaggg
gaacccgtgaagacggataagaactccaggagagggaactgggggaaccagatagagttt
atcctcaccagcgtgggctatgctgtgggcctgggaaacgtatggaggttcccctacctc
tgctacagaaatggaggaggagccttcatgttcccctacttcatcatgctggtgttctgt
gggatccccctgttcttcttggagctctccttcggacagttcgccagccagggatgcctg
ggggtctggaggatcagccccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcatcgccttctactatttcttctcc
tccatgaccaacctgctgccgtggacctactgcaacaacccctggaacacgcccacctgc
aacggcgtggtgacgcccacgggcatcaacaacaccctggccaacgtcacccgcagcctg
gtcaccgttgccgctgaggtcgctgtggaggtagtcaataagaccaagaggaccagcccc
agtgaggagtactggaaacactacgtgctgcagatctcagacgacatcgggaatttcggg
gaagtccgtctccctattctgggatgtctggccgtgtcatgggtggtggtcttcctctgt
ctcataagaggagtcaagtcttcaggcaaggtggtgtacttcacagcgacgttcccctac
gtggtgctgaccatcctcttcatcagaggcatcaccctggagggagctgtcactggcatc
aagtactacctgaccccacagtggcataagatccttgacgctaaggtgtggggagacgct
gcctctcagatcttctactctctgggctgtgcatggggagggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagagacagcatcatcatcagcatcaccaactgt
gcgaccagcgtgtatgcaggcttcgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtggatgtatctgaggtggccgaccacggccctggcctggccttcgtggcctac
ccagaggccctcactctgctgcccatctcccccctctggtccctgctcttcttcttcatg
ctcatcctgctgggcctggggacgcaattctgcctgctggagaccctggtgacagccatc
gtggatgagattggtactgactggatcattaggaacaagacggtggtcacaggaggagtg
gctatagtgggcttcctgctgggggtgccgctcaccacacaggctgggatctactggctg
ctgctcatggataactacgctgctagtttctctctggttatcatctcctgcatcatgtgc
atctgcattatgtacgtctatggacacaagaaatacttcaaggatgttgagatgatgctg
ggtttcccccctccaatcttcttccgggtctgctggagattcgtgtcccccatcatcata
tcttttatcctgatcttcacagtgatccagtacaagcccatcacctacaacgactacgtg
taccctggctggtccctagccatcggcttccttatggccatgtcctccgtcatctgcata
cccatctatgctctctacaagatcggcaagtctgagggaaccacatttttagagcggttg
aagaattcgtgcaagccagatatgaagtggggcccggccctgagtgagcaccggataggc
ctctacgccaccccaggctcagatggagaggtggaggtgtgtcccctgaaagagaaggag
aaggaggatgagaagagggatgagatcagcctcaccatccagggcagcaacggctccaca
gcacacaacactacccccagcacatag
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