Coregonus clupeaformis (lake whitefish): 121535228
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Entry
121535228 CDS
T08357
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121535228
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121535228
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GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
121535228
NCBI-ProteinID:
XP_041698019
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Position
21:complement(15999183..16004194)
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AA seq
604 aa
AA seq
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MTSSMVVPVIDVQNDNFKELWPAMVLAIKTASYIALDTELSGLGSRKALLAECIEERYKA
ICNAARTRSILSLGFACYKKRENKDDDTYLVQVYNLTLLCDEEYVIEPQSVQFLVQHGFD
FNKQYAEGVPYLKGNDKGGDAHGMNMRMLFVELLRARKPLVLHNGLIDMVFLYQCFYAHL
PDKLATFTADLSQMFPAGIYDTKYATEYELRFAASYLEYAYKKCKLDNSKSLEVGGNGRH
LFLEFCKYSGHLSSYVDYRPCLAGSSLEGPLNVCQRFSAYGWCPNGSQCPLSHDTDLIIQ
HDEKNKVEKKKKRKRKRKNSSQGNVDFEGAPNNKQAHMELNDGEQGPDQVIPATDSKPTP
VTEQVDGTPAQGSESGEKITEKVEEEGNRVAEPQAVSADEEIKTDKEKVEGNGVSEPQPL
ATPDAAKEEENEVSEPQPLATPDAAKEEENEVSEPQPLATPDAAKEEENEVSEPQPLATP
DAAKEEENGVSEPQPLATPDAAKKEKSMRKKLEGGTHRAGFDAFMTGYIFSYAATLTERV
GESPGSESWLPECLNKVYLSGKSVPMHIVKSTFSKSSKAHMHKMDIVWGKSFSSSVASKA
EGTG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctccatggtagtccctgttattgatgtgcagaatgataatttcaaagaactg
tggcctgcaatggtccttgcaatcaagactgcctcctacattgcactggatacagaattg
agtggccttggaagcagaaaagctttgctggcagaatgcatagaggagcgttacaaagcc
atatgcaatgcagctcgcacacgctccattctctcccttgggtttgcttgttataagaaa
cgtgaaaacaaggatgatgatacgtaccttgttcaggtgtacaacctgacgttgctctgc
gatgaggagtacgtaattgaaccacagtctgtgcagttcctggtgcaacatggatttgac
ttcaacaaacaatatgctgaaggtgtcccttatctcaagggcaatgacaagggaggggat
gcccatggaatgaacatgcggatgctgtttgtagaactcctgcgtgctcgcaagccattg
gttctacacaatggcttgatcgacatggtattcctatatcagtgcttctatgcccacctg
ccagataaacttgccactttcactgctgacctgtcccagatgttcccagctgggatatat
gacaccaagtacgccacagagtatgagctgcgctttgctgcctcttacctagagtatgcc
tacaagaaatgtaaattggacaacagcaagtctcttgaggttggtggtaatggacgccat
ctgttcctggagttttgcaaatactcaggccacctgtccagctatgtggactacaggccc
tgtctggccgggtctagcctcgagggaccgctgaatgtctgccagcgcttctctgcttac
ggttggtgccccaatgggtcacagtgtcccttgtcacatgacacagacctcatcatccag
cacgatgaaaaaaacaaggtggaaaagaaaaagaaacggaagaggaaaagaaaaaactct
tctcaggggaacgttgactttgaaggtgcccccaataataagcaggcccatatggagctg
aatgatggagagcagggcccagaccaggtgatccctgccacagacagcaaacctacccct
gtcacagagcaggtagatgggactccggcacaggggtcagagagcggtgagaaaattaca
gagaaggtagaggaggaaggcaacagagtcgcagagccacaggctgtgtctgcagatgaa
gaaattaagactgacaaagaaaaggtggaaggaaatggagtgtcagagccacagcctctg
gccacaccagatgcagcaaaggaagaagaaaatgaagtgtcagagccacagcctctggcc
acaccggatgcagcaaaggaagaagaaaatgaagtgtcagagccacagcctctggccaca
ccagatgcagcaaaggaagaagaaaatgaagtgtcagagccacagcctctggccacacca
gatgcagcaaaggaagaagaaaatggagtgtcagagccacagcctctggccacaccggat
gcagcaaagaaagaaaagtccatgaggaagaagctggagggaggtacccaccgggcaggg
tttgatgcattcatgaccggctacatcttctcttatgccgccactctgacagagagagta
ggtgagtcaccgggttcagagtcctggctccctgagtgcctgaacaaggtttacctcagt
ggtaagtctgtcccgatgcatattgtcaagagcaccttctctaagtcctccaaggctcac
atgcacaagatggacattgtgtggggaaagagtttttctagcagtgtggctagcaaagca
gagggaactgggtaa
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