Entry |
|
Symbol |
cntnap2b
|
Name |
(RefSeq) contactin-associated protein-like 2b
|
KO |
K07380 | contactin associated protein-like 2 |
|
Organism |
cclu Coregonus clupeaformis (lake whitefish)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121535269 (cntnap2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
121535269 (cntnap2b)
Domain-containing proteins not elsewhere classified [BR:cclu04990]
Laminin domain-containing proteins
Laminin G domain-containing proteins
121535269 (cntnap2b)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
21:17840659..17914603
|
AA seq |
1314 aa
MLPGPELTLLLWIFSCISSLSSASSASRKCDEVLATPLSHTAFTSSSVYSGGYGAGYAKL
NRRGGAGGWSPVDADRYQWLQVDLGTRKQVTFIATQGRYSSSDWTTQYRLLYSDTGRNWR
PYLQDGNIWAFSGNSNSESVVRHDLQHAIITRYVRFIPLEWSEEGRIGLRVEVYGCSYWA
DVINFEGQGVISYRFKMKKMKILKDIISLKFKTTASNGVLLHGEGQQGDYISLELKRSKL
LLMINLGSNQYGSILGHTSVTSGSLLDDDHWHSVIIERYRRNVNFTLDRHTQHFRTNGEF
DHLDLDYEISFGGMPFSAKPSTGGRENFVGCMEGITYNGDNITNLVKRKKIDTSSFRNLT
FSCSETHSFPLFFNATSFLRLPGLPDSDTLSVSLSFRTWNPSGLLLYTALADGVVEVGLT
QGKVTVYINVTQKKNTRIDISSGSGLNDGQWHNVYLHALENYAMLTIDGDEASTVRTVIP
IQIRTGGQYYFGGYFLRTNTPPAQRSFQGCMQLIHVDDQLADLVAVEQGNMGTFENVSLD
MCAIIDRCVPNHCEHRGRCSQTWDSFSCFCNGTGYTGATCHTSVYEQSCEEYKHLGKTSG
SYWIDPDGSGPVGPFKVNCNMTEDKVWTTVRNNLSPQTSVSGSDLEGKAVLQLNYNMSTE
QVTAITGSAEYCEQHVAYACRMSRLLNTPERSPFTWWVGRANEKHFYWGGSGPGIKKCAC
GIERNCTDPKYYCNCDADQTRWREDAGLLVYKDHLPVSQVVVGDTNRAGSEAKLTVGPLR
CQGDGNYWNAASFNTPASYLHFPTFQGETSADISFYFKTSSSYGVFLENLGNADFIRLEL
KAATVVSFSFDVGNGLVELSVRSSTPLNDDQWHRVVAERNVKEAVLQLDGQYKDVRPAPP
QGHTRLELYSQLYVGASGGQRGFLGCIRALKMNGVTLDLEERAKVTPGVKPGCSGHCTSY
GQHCRNGGKCMEKYNGYSCDCTLTAYDGPFCTEDVGGFFESGTLVRYDFLPEGGLPAIRD
VKSLSPLLPTEGNLTQEELVFSFSTSNAPSILVYISSRTQDYLAVVLRHNGTLQIRYSLG
GLREPFTINLDHRNMANGQPHHINISRQERNIRLQLDHYPPVSYTLPDGSDTQFNLVKTI
FLGKVFETGQIDPVLIEKYNTPGFVGCLSRVNFNNIAPLKAALRSGIVAPVTTQGILVES
NCGSSPLTISPMAAANDPWHMDSAGAVFPFNEERVSRDGVDQNSAVIGGIIAVVIFIILC
TLVFLIRHMFRHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI |
NT seq |
3945 nt +upstreamnt +downstreamnt
atgcttcctggaccggagctaacattactgctctggatcttcagttgcatcagcagcctc
agctcagcatcttcagcatccaggaaatgtgatgaagtgttggccacacccctctcccac
acggctttcaccagctcctctgtgtactccggtggatatggggctggatacgcaaagctc
aacaggagaggaggtgctggaggctggtctccagtggatgctgaccgttaccagtggctg
caggtggacctgggcaccaggaagcaagtcacctttatcgccacacagggccggtacagc
agctctgattggacaacccagtacagactcctgtacagtgatacaggaaggaactggaga
ccatatctgcaagatggcaacatatgggcattttcaggcaactccaacagcgagagtgtg
gtccgccatgatctgcagcatgcaatcataacacgctacgtccgcttcatcccactggag
tggagcgaagaggggaggatcggcctgagagtggaagtctatggctgttcttactgggca
gatgtgatcaacttcgaaggccagggtgtgatctcctaccgcttcaagatgaagaagatg
aagatcttgaaggacatcatctccctgaagtttaagaccacggccagtaacggtgtgctc
ctgcacggggagggacagcagggagactatatcagcctggagctgaagagatccaaacta
ctgctcatgatcaacctgggcagcaatcagtacggctccatcctcgggcacacctccgtg
acaagcggaagtttattggatgatgaccattggcactccgtaattattgagcgttaccga
cggaatgtcaactttaccctggatcgccacacacagcacttccgcaccaatggtgaattt
gatcatcttgacctggactatgagatcagttttggaggcatgcccttctctgccaagccc
agcacaggaggcagggagaactttgttggctgcatggagggcatcacctacaacggagat
aacattaccaacctggttaagaggaagaaaattgatacttcaagttttaggaacctgaca
ttctcctgcagcgagacacactccttccccttgttcttcaacgccaccagcttcctgcgt
cttccggggctgccggacagtgacaccctgtcggtcagcctgtccttccgaacgtggaac
cccagcggtctgctcctctacacggccctggccgacggtgtggtggaggtgggcctcacc
cagggaaaggtcactgtctacatcaacgtcacccagaagaagaacacgcgcatagacatc
tcctcaggttcggggctcaacgacggccagtggcacaacgtctatctccatgctctggag
aactacgccatgctgaccatcgatggtgacgaggcgtccaccgtcagaacggtcattccc
attcagattagaacagggggccaatactactttggaggctacttcctgcgtaccaacact
ccccctgcccagcgctccttccagggctgtatgcagctgatccacgtggacgaccagcta
gctgacctggtggcggtagagcaaggcaacatgggaacctttgagaatgtcagcctggat
atgtgtgccatcatagacagatgtgtccctaaccactgtgaacatagaggccgctgctct
cagacctgggatagtttcagctgcttctgtaacgggacaggatacaccggggctacatgc
catacctccgtgtatgaacagtcctgtgaggaatacaaacaccttggtaaaacatctggc
tcgtactggatcgaccctgatgggagtggtcctgttggccccttcaaagtcaactgcaac
atgactgaggacaaggtgtggacgacagtgagaaacaacctgtctccccagacttcagtg
agtggctcagacctggaggggaaggctgtgctgcagctcaattacaacatgtccacagag
caggtgacagccatcacgggcagtgcggagtactgtgaacagcatgttgcctacgcctgc
cgaatgtctcgactgctcaatacgccagagagatctccattcacatggtgggttggcagg
gccaatgagaagcatttttactggggtggttcaggcccagggatcaagaagtgtgcctgt
ggaatcgagaggaactgcaccgacccaaagtactactgcaactgtgacgctgaccaaacg
cggtggagagaggacgctggtctcctggtgtataaagaccatttgcctgtgagtcaggtg
gtggttggtgacactaatcgtgctggttctgaggctaaattgactgtgggtccactgcgt
tgtcaaggagatggtaactactggaacgcagcatccttcaacacgcctgcatcctacctg
cacttccctaccttccaaggagagaccagtgctgacatctctttctatttcaagacttcc
tcctcttatggcgtttttctggagaaccttggcaacgctgacttcatccgcctggaacta
aaagctgccacggtggtgtccttctcctttgatgtgggcaacggtctggtggagctgagt
gtgaggtcgtccactcctctaaatgatgaccagtggcacagggtggtggctgagcgcaac
gtgaaggaggccgtgctgcagctggatgggcagtacaaggacgttcgccctgcgccccca
cagggtcacacccgcctggagctatacagccagctctacgtgggtgcatcaggtggccaa
agggggttcctaggatgtatccgtgccctgaagatgaacggtgtgacccttgacctggag
gagagggcgaaggtcactccaggggttaagcctggctgctctggccactgcaccagctat
gggcagcactgcagaaacggtggcaagtgcatggagaaatacaacggttactcatgcgac
tgcaccttgactgcctatgacgggcccttctgcactgaagatgtgggcggcttctttgag
agtggaacactagttcgttacgacttccttcccgaggggggccttccagccatcagggat
gtgaagagcctgtctcccctgctgcccacggagggcaacctgacccaggaggagctggtg
ttcagcttcagcacctccaacgccccaagcatcctggtctacatcagctccaggacccag
gactacctggctgtggtgctcagacacaatggaacacttcagatccgctacagccttgga
ggcctgagggagccgttcaccatcaacctggaccaccgcaacatggccaacgggcagccc
caccacatcaatatctccaggcaggagaggaacatacggctgcagttggatcattacccc
ccagtcagctacactctgcctgatggctctgacactcagttcaacctggttaagaccata
ttcctggggaaagtttttgaaactggccagattgacccagtcctcatagagaagtacaac
accccagggttcgtgggctgtctgtccagagttaatttcaacaacatcgcccctctgaag
gcagcgctgaggtctggcatcgtcgccccggtgaccacccagggcattctagtggagtcc
aactgcgggtcgtctcctctcaccatctcacccatggctgctgccaatgacccctggcac
atggactcagctggtgctgtattcccattcaatgaggaaagagttagccgggatggagtt
gatcagaactctgcagttatcggaggtatcattgctgtggtcatcttcatcatcctctgc
accctggtgttcctgattcgccatatgttccgtcacaagggctcctaccacaccaatgag
gccaaaggggcggagtctgcggactgtgccgatgcagccatcattgtcaatgatcctgcc
ttcacagaaaccatcgatgagagcaagaaggagtggttcatctaa |