KEGG   Coregonus clupeaformis (lake whitefish): 121535269
Entry
121535269         CDS       T08357                                 
Symbol
cntnap2b
Name
(RefSeq) contactin-associated protein-like 2b
  KO
K07380  contactin associated protein-like 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121535269 (cntnap2b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121535269 (cntnap2b)
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Laminin domain-containing proteins
  Laminin G domain-containing proteins
   121535269 (cntnap2b)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 F5_F8_type_C Laminin_G_3 F5_F8_type_C_2 EGF COLFI Syndecan
Other DBs
NCBI-GeneID: 121535269
NCBI-ProteinID: XP_041698090
LinkDB
Position
21:17840659..17914603
AA seq 1314 aa
MLPGPELTLLLWIFSCISSLSSASSASRKCDEVLATPLSHTAFTSSSVYSGGYGAGYAKL
NRRGGAGGWSPVDADRYQWLQVDLGTRKQVTFIATQGRYSSSDWTTQYRLLYSDTGRNWR
PYLQDGNIWAFSGNSNSESVVRHDLQHAIITRYVRFIPLEWSEEGRIGLRVEVYGCSYWA
DVINFEGQGVISYRFKMKKMKILKDIISLKFKTTASNGVLLHGEGQQGDYISLELKRSKL
LLMINLGSNQYGSILGHTSVTSGSLLDDDHWHSVIIERYRRNVNFTLDRHTQHFRTNGEF
DHLDLDYEISFGGMPFSAKPSTGGRENFVGCMEGITYNGDNITNLVKRKKIDTSSFRNLT
FSCSETHSFPLFFNATSFLRLPGLPDSDTLSVSLSFRTWNPSGLLLYTALADGVVEVGLT
QGKVTVYINVTQKKNTRIDISSGSGLNDGQWHNVYLHALENYAMLTIDGDEASTVRTVIP
IQIRTGGQYYFGGYFLRTNTPPAQRSFQGCMQLIHVDDQLADLVAVEQGNMGTFENVSLD
MCAIIDRCVPNHCEHRGRCSQTWDSFSCFCNGTGYTGATCHTSVYEQSCEEYKHLGKTSG
SYWIDPDGSGPVGPFKVNCNMTEDKVWTTVRNNLSPQTSVSGSDLEGKAVLQLNYNMSTE
QVTAITGSAEYCEQHVAYACRMSRLLNTPERSPFTWWVGRANEKHFYWGGSGPGIKKCAC
GIERNCTDPKYYCNCDADQTRWREDAGLLVYKDHLPVSQVVVGDTNRAGSEAKLTVGPLR
CQGDGNYWNAASFNTPASYLHFPTFQGETSADISFYFKTSSSYGVFLENLGNADFIRLEL
KAATVVSFSFDVGNGLVELSVRSSTPLNDDQWHRVVAERNVKEAVLQLDGQYKDVRPAPP
QGHTRLELYSQLYVGASGGQRGFLGCIRALKMNGVTLDLEERAKVTPGVKPGCSGHCTSY
GQHCRNGGKCMEKYNGYSCDCTLTAYDGPFCTEDVGGFFESGTLVRYDFLPEGGLPAIRD
VKSLSPLLPTEGNLTQEELVFSFSTSNAPSILVYISSRTQDYLAVVLRHNGTLQIRYSLG
GLREPFTINLDHRNMANGQPHHINISRQERNIRLQLDHYPPVSYTLPDGSDTQFNLVKTI
FLGKVFETGQIDPVLIEKYNTPGFVGCLSRVNFNNIAPLKAALRSGIVAPVTTQGILVES
NCGSSPLTISPMAAANDPWHMDSAGAVFPFNEERVSRDGVDQNSAVIGGIIAVVIFIILC
TLVFLIRHMFRHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI
NT seq 3945 nt   +upstreamnt  +downstreamnt
atgcttcctggaccggagctaacattactgctctggatcttcagttgcatcagcagcctc
agctcagcatcttcagcatccaggaaatgtgatgaagtgttggccacacccctctcccac
acggctttcaccagctcctctgtgtactccggtggatatggggctggatacgcaaagctc
aacaggagaggaggtgctggaggctggtctccagtggatgctgaccgttaccagtggctg
caggtggacctgggcaccaggaagcaagtcacctttatcgccacacagggccggtacagc
agctctgattggacaacccagtacagactcctgtacagtgatacaggaaggaactggaga
ccatatctgcaagatggcaacatatgggcattttcaggcaactccaacagcgagagtgtg
gtccgccatgatctgcagcatgcaatcataacacgctacgtccgcttcatcccactggag
tggagcgaagaggggaggatcggcctgagagtggaagtctatggctgttcttactgggca
gatgtgatcaacttcgaaggccagggtgtgatctcctaccgcttcaagatgaagaagatg
aagatcttgaaggacatcatctccctgaagtttaagaccacggccagtaacggtgtgctc
ctgcacggggagggacagcagggagactatatcagcctggagctgaagagatccaaacta
ctgctcatgatcaacctgggcagcaatcagtacggctccatcctcgggcacacctccgtg
acaagcggaagtttattggatgatgaccattggcactccgtaattattgagcgttaccga
cggaatgtcaactttaccctggatcgccacacacagcacttccgcaccaatggtgaattt
gatcatcttgacctggactatgagatcagttttggaggcatgcccttctctgccaagccc
agcacaggaggcagggagaactttgttggctgcatggagggcatcacctacaacggagat
aacattaccaacctggttaagaggaagaaaattgatacttcaagttttaggaacctgaca
ttctcctgcagcgagacacactccttccccttgttcttcaacgccaccagcttcctgcgt
cttccggggctgccggacagtgacaccctgtcggtcagcctgtccttccgaacgtggaac
cccagcggtctgctcctctacacggccctggccgacggtgtggtggaggtgggcctcacc
cagggaaaggtcactgtctacatcaacgtcacccagaagaagaacacgcgcatagacatc
tcctcaggttcggggctcaacgacggccagtggcacaacgtctatctccatgctctggag
aactacgccatgctgaccatcgatggtgacgaggcgtccaccgtcagaacggtcattccc
attcagattagaacagggggccaatactactttggaggctacttcctgcgtaccaacact
ccccctgcccagcgctccttccagggctgtatgcagctgatccacgtggacgaccagcta
gctgacctggtggcggtagagcaaggcaacatgggaacctttgagaatgtcagcctggat
atgtgtgccatcatagacagatgtgtccctaaccactgtgaacatagaggccgctgctct
cagacctgggatagtttcagctgcttctgtaacgggacaggatacaccggggctacatgc
catacctccgtgtatgaacagtcctgtgaggaatacaaacaccttggtaaaacatctggc
tcgtactggatcgaccctgatgggagtggtcctgttggccccttcaaagtcaactgcaac
atgactgaggacaaggtgtggacgacagtgagaaacaacctgtctccccagacttcagtg
agtggctcagacctggaggggaaggctgtgctgcagctcaattacaacatgtccacagag
caggtgacagccatcacgggcagtgcggagtactgtgaacagcatgttgcctacgcctgc
cgaatgtctcgactgctcaatacgccagagagatctccattcacatggtgggttggcagg
gccaatgagaagcatttttactggggtggttcaggcccagggatcaagaagtgtgcctgt
ggaatcgagaggaactgcaccgacccaaagtactactgcaactgtgacgctgaccaaacg
cggtggagagaggacgctggtctcctggtgtataaagaccatttgcctgtgagtcaggtg
gtggttggtgacactaatcgtgctggttctgaggctaaattgactgtgggtccactgcgt
tgtcaaggagatggtaactactggaacgcagcatccttcaacacgcctgcatcctacctg
cacttccctaccttccaaggagagaccagtgctgacatctctttctatttcaagacttcc
tcctcttatggcgtttttctggagaaccttggcaacgctgacttcatccgcctggaacta
aaagctgccacggtggtgtccttctcctttgatgtgggcaacggtctggtggagctgagt
gtgaggtcgtccactcctctaaatgatgaccagtggcacagggtggtggctgagcgcaac
gtgaaggaggccgtgctgcagctggatgggcagtacaaggacgttcgccctgcgccccca
cagggtcacacccgcctggagctatacagccagctctacgtgggtgcatcaggtggccaa
agggggttcctaggatgtatccgtgccctgaagatgaacggtgtgacccttgacctggag
gagagggcgaaggtcactccaggggttaagcctggctgctctggccactgcaccagctat
gggcagcactgcagaaacggtggcaagtgcatggagaaatacaacggttactcatgcgac
tgcaccttgactgcctatgacgggcccttctgcactgaagatgtgggcggcttctttgag
agtggaacactagttcgttacgacttccttcccgaggggggccttccagccatcagggat
gtgaagagcctgtctcccctgctgcccacggagggcaacctgacccaggaggagctggtg
ttcagcttcagcacctccaacgccccaagcatcctggtctacatcagctccaggacccag
gactacctggctgtggtgctcagacacaatggaacacttcagatccgctacagccttgga
ggcctgagggagccgttcaccatcaacctggaccaccgcaacatggccaacgggcagccc
caccacatcaatatctccaggcaggagaggaacatacggctgcagttggatcattacccc
ccagtcagctacactctgcctgatggctctgacactcagttcaacctggttaagaccata
ttcctggggaaagtttttgaaactggccagattgacccagtcctcatagagaagtacaac
accccagggttcgtgggctgtctgtccagagttaatttcaacaacatcgcccctctgaag
gcagcgctgaggtctggcatcgtcgccccggtgaccacccagggcattctagtggagtcc
aactgcgggtcgtctcctctcaccatctcacccatggctgctgccaatgacccctggcac
atggactcagctggtgctgtattcccattcaatgaggaaagagttagccgggatggagtt
gatcagaactctgcagttatcggaggtatcattgctgtggtcatcttcatcatcctctgc
accctggtgttcctgattcgccatatgttccgtcacaagggctcctaccacaccaatgag
gccaaaggggcggagtctgcggactgtgccgatgcagccatcattgtcaatgatcctgcc
ttcacagaaaccatcgatgagagcaagaaggagtggttcatctaa

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