Coregonus clupeaformis (lake whitefish): 121535288
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Entry
121535288 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X2
KO
K20315
Rho GTPase-activating protein 21/23
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535288
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Others
Others
121535288
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121535288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121535288
NCBI-ProteinID:
XP_041698123
LinkDB
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Position
21:32021702..32093277
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AA seq
1875 aa
AA seq
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MMASRWEGPCDEEEERLTRSSLCENDVPEWGEQGDSHAGLFNLQGEEEPFSWPGPKTLRL
RRTSQGFGFTLRHFIVYPPESAVHPYPFPEEEHGRRGRQRNRLEPMDTIFVKQVKEGGPA
NEAGLCTGDRIVKVNGASIIGKTYSQVIALIQNSDAFLELCVMPKDEDILQLAYSQDAYR
RSRGAYSGNAHHIPEPPPICYPRVDCKLPGMAQTTETPSPVGVGVQGACRGTTPPDMGYR
MEIPVPPSPPPAHLYPKSQTVACMRNDSVRTVVVPPELGRVGPAHRIDYGLVGPPGLIRV
RPGSVSHYPLPRKTDIYPSGASLLNYGAPLPHYPPNSNSPNPGSHQNIDWRTYQTYREYI
DNKSIHAYGSRTIQERLESLRATSQNTFNSSHHIPRGGWGPNPKGLRRRSTSHDRAYHGH
PPPFHHMPPRSSSQDRMSMAERGVHPRNWPPRSVSQDGLTHKARARSSDCDYVDPVELGR
PMVDRRGYASRVDQGTRPSRQSLSKQAVQHRPPAGYSRDSLRGPPMPNPTLYAKGPEQLQ
HKPHGAPNMPQDRSSHLGKSISLEPSPTDQRAGVKGVNHVSQSRGRAETMQPPGEVPGRE
VAVVVGHRSSSLSAPHQRQQRPGILKTSHHHPRPEPQAQVNGRGPSASESGVVLREKPPG
SGKNPSPLRHPSYILAVNEEDGSEPAADAVCWLPNDARREMHIRRLNKNQEKDQTSYSSS
NLEESLDSIPFIDEPASPSVDHEATSFPASAVISGAPAIRPLNPSSSPCPFIRRQLSHGQ
ESLRNAILESDAATKQERSKSCDEGLDNYKEEGRGRSNSKHMPGLRGLRKALDGHKSSDD
SGSRRDSSSDIFSDSSKEGWLNFRQLNTEKSKRVGGVSRSWKQMYAVLRGHALTLYKDKK
DGVSHASSHSQSDDDPQPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEGRDDMLS
WIRVIQENSNLDDENAGITSQDLISRKIREYNTMMSAPSTKTEPSPKTSRQSLSIRHTLL
GGKGEGKSPHSPKTGERDDSSPPRDKAAWRRGIPGIMRKPFEKKTTTGVTFGVRLDDCPS
AQTNRFVPLIVEVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDNKGLMSDIDIQEDK
WRDLNVISSLLKSFFRKLPEPLFTNEKYADFIEANRTEDSVERLKELKRLILELPDHHYE
TLKFLSGHLKLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPDQCKIVENLI
QQYDWFFTEEGDDDPVTSVEQESTVRSQPVPNIDHLLSNIGRTTTTTSAAEVSDSACSDS
SKSKGLWGSGKDQCSREMLRSSFFVSRKRKKPKDKAQPSSSDDDLDAVYAKKEQPEQQSL
SHQDLHPAWSPESQTEEEREASERGEQPGDRVQTNGKESRSDSLMSQPSPPPSPKHTPSP
SLRTTSTRSPYTSQSPRVGHRRQVAHQSSLSDPPSNYDEVSDLGTMNSTSSQASVTGPRV
RHGRTGALGPETGASGLGAEVSSITSDYSTTSSMTFLTGAELSTLSPEVRSVAESRGGDD
ADDECSELISEGRPMETDSESDLSLFIGSVKETRPVKDICQSDVPDAPRPLPSHRLIECD
TLSRKKSAARQKTDSDSSLDGGQSDKDSNRLSRVLGAVKGLSTSSLSSSSRSESEKGTEP
AWRLKITDRLKFRLRTSVDDMFGVGTQQSRSPEGRRDKKKNIRRRHTMGGQRDFAELSVM
GDWQGGIGMGGGSRTELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDFSEHHGA
LLLLRKPDPQNPDHPQAQEAPSSSPSDPFSPHPTPAELLNGDAGPQSKSLNLSATAHPHK
LSGAQVVHSRFYQYL
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcacgttgggaaggtccatgcgatgaagaggaggagagactgaccagatcc
tctttgtgcgagaatgacgtgccagagtggggtgagcagggggattcccatgcaggcctg
ttcaacctgcagggcgaggaggagccgttctcgtggccggggcccaagacactccgtctt
cgacgcacctctcagggcttcggcttcactctgcgccacttcattgtctatccgcccgag
tcagccgtgcacccgtaccccttcccggaggaagagcatggccgcagagggagacaacgg
aacaggctggagccaatggacaccatctttgtgaagcaagtgaaggagggaggtcctgcc
aacgaagctggactctgcacaggagacaggatagtaaaggtgaacggagcgagtatcatt
gggaaaacctactctcaggtcatagccttgatccaaaacagtgatgcctttcttgaactc
tgtgttatgccaaaagatgaagacatactgcagctggcctactcccaggatgcgtaccgc
cgaagccgcggtgcttacagtggaaatgcccatcacatccccgagccgccccccatatgt
taccctcgagtagactgtaagctcccggggatggcccagactacagagaccccctccccg
gtcggagtgggggtacagggagcatgccgggggacaacaccacccgacatggggtaccgt
atggagattcctgtgcccccctccccgcctcctgcacacctgtaccccaaatcacagacc
gtggcgtgcatgcgcaacgacagcgtgaggactgtggtagttcctccagaactgggccgt
gtaggaccagcacacagaatagactatggcctggtagggccccctggcctcatcagagtg
cgtcctgggtctgtgtcccactacccactgccacggaaaacagacatctacccctctggg
gcaagcctcctcaattacggtgccccgctaccccactacccacccaactctaactccccc
aaccccggctctcatcaaaacatagactggcggacgtaccagacctacagggagtacatc
gataacaagagtatccacgcctacggcagccggaccatccaggagagactagaaagcctg
cgagccaccagccagaacaccttcaactcctcccaccacatcccccggggtggctggggc
cccaaccctaagggtctccggcgcaggagcacctcccatgaccgcgcctaccatggacac
ccgccccccttccaccacatgcccccccgcagctcttcccaggaccgtatgagtatggcg
gagcggggggtccaccccaggaactggcctcctcgtagtgtgtcccaggatgggttaacg
cacaaggcccgggcccgctcctctgactgtgactatgtggaccctgtggagctgggccgg
cctatggtggacagacggggctacgctagcagggtggaccagggtacacgccccagcagg
cagagcctctccaaacaggctgtccagcaccgaccccctgcagggtacagtagggacagc
ctccgtggaccaccaatgcccaaccctactctctatgctaaaggaccagagcagctccag
cacaagcctcacggcgctcctaacatgccccaagacagatcctctcacctagggaagagc
atcagcttggagccctccccaactgaccaaagagctggagtcaaaggtgtgaaccatgtg
agccagagcagggggcgggcggagaccatgcagccgccaggggaggtgccagggagagag
gtggcagtggtagtgggccataggtcctcgtccttatccgctccccatcagagacagcag
aggcctgggatcctcaaaacctcccaccaccaccctcgcccagaaccccaggcccaggtg
aacggtcgcggcccctctgcctcagagtcgggcgtcgtcctcagggaaaagcctcctggg
tcggggaagaaccccagccccctgcgccacccttcctacatcctggcggtaaacgaggag
gacggttcggaaccagcagcggacgcagtgtgctggctacccaacgatgcgcggcgggag
atgcacatacggcggctgaacaagaaccaggagaaggaccagacctcctactcctccagc
aacctggaggagtccctcgactccatcccctttatcgatgagccggctagcccgagtgtt
gaccatgaggccacgtcctttcctgcttccgctgtgatatctggcgctccagccatacgc
cccctgaacccaagctcctccccgtgccctttcattcgccgacagctgtcacatggccaa
gagtccctcagaaatgctatcctggagtctgatgccgcgaccaaacaagagaggtccaaa
tcctgtgacgagggtctggataactacaaagaggaaggcagaggccggtccaacagtaaa
cacatgcctggcctgagaggcctgagaaaggctctggatggacacaagtcgtctgatgac
tctggctccagaagggactcctcttcagatatcttcagtgactcttctaaagaaggctgg
ctcaacttcaggcagctcaacactgagaagagcaagcgtgtgggtggggtttcgaggtcg
tggaagcagatgtatgccgtgctgcgaggccacgccctcacactctataaggacaagaag
gacggcgtctctcacgcctcttcccactcccagtctgacgacgacccacagccaatcagc
atcaaggcctgcctgattgacatctcctacagcgacacgaaacgcaagaatgtgctgcgg
ctgaccacgtcggactgcgagtacctgttccaggcggagggcagggatgacatgctgtcc
tggatcagagtcatccaggagaatagtaatctggatgatgagaatgctggtataaccagc
caggacctgatcagcagaaagatcagagagtacaacaccatgatgagtgctcccagcacc
aagactgagccttcccccaaaacctcccggcagtccctcagtatcagacacaccctcctg
ggggggaagggagagggcaagagcccacactcacccaaaacaggagagcgggatgactcc
agtcctccacgggataaggctgcctggaggaggggcatccccggcatcatgaggaagccc
tttgagaagaagaccacaactggggtcacctttggggtgcgcctcgatgactgcccatct
gcacagaccaacaggtttgttcctctcatcgtggaggtgtgctgtaagctggtagaggag
agggggctagagtacactgggatctacagagtaccagggaacaacgctgccatctccagc
atgcaggaggagctggacaataaaggactgatgagtgacatcgacatccaagaagataaa
tggagggacctcaacgtgatcagtagtttactgaaatccttcttccggaaacttccagaa
ccactttttacaaatgaaaaatatgccgattttattgaagccaatcgaacagaagactca
gtagagaggttgaaagagcttaaaaggctgatccttgaattgcctgatcatcactatgaa
accctcaaatttctctctggacacctcaagttggtctctgaaaactgtgagaaaaataag
atggagcctcgtaacctggccatcgtgtttggtccgacgctggtcagaacctcagaggac
aacatgaccaatatggtcaaccacatgccagaccagtgcaagatagtggagaacctcatt
cagcagtacgactggttcttcactgaggagggggacgatgaccctgttacctcagtggaa
caggagagtacagtgcggtctcagcctgtgccaaacatcgaccacctgctgtccaacatc
ggccgtaccacaacaaccacctcagctgcggaagtgtcagattcagcatgtagtgactcc
tccaaatcaaagggcttgtggggctctgggaaggaccagtgtagcagggagatgcttcgc
tcctccttctttgtcagccgcaagcgtaagaagcccaaggacaaggctcagcccagcagc
tctgacgatgacctggacgccgtctatgctaagaaggagcagccagaacaacagagcctg
agccaccaggacctccaccccgcctggtccccagagagccagacggaggaggagagggag
gccagcgagagaggggaacagccaggggacagggtccaaaccaacgggaaagagtcccgt
tcagacagcctcatgtctcagccctctccacccccctctcccaaacacaccccctccccc
agcctccgtaccacctccacacgctccccctacacctcccaatccccccgcgtcggccac
cgcaggcaggtagcccaccagtcctctctgtcggaccccccctccaactacgatgaggtc
tcagacctgggcaccatgaacagcaccagctcccaggcatctgtgacgggacccagggtg
aggcatggcaggacgggggccctgggaccagagactggagccagtggcctgggggccgag
gtcagctccatcacctcagactactccaccacctcctccatgaccttcctcaccggggcc
gagctgagcacgctcagtccagaggtacgctcggtggccgagagcaggggaggagatgac
gctgatgatgagtgtagtgagctgattagtgagggccggcccatggagacagacagcgag
agcgacctatcgttgtttattgggagtgtgaaggagacccggccggtgaaagatatctgc
caatcagacgtgccggacgcgcccaggccccttccctcccacagactcatcgagtgtgat
actctctccaggaagaagtctgcagcgcgtcagaagactgacagcgattcctcgttggac
ggagggcagagcgacaaggattccaataggctgtctcgcgttctgggggcagttaagggg
ctttccaccagcagccttagctcctcctcccgcagcgagtcagagaagggtactgagcct
gcatggcgtctcaagatcacagaccggctgaagttccgtctgcggacgtctgtagacgac
atgttcggggtgggcactcagcagagccgctctccagagggacgcagggacaagaagaag
aacatcagacgccgacacaccatgggaggccagagggactttgctgagctgtctgtgatg
ggggactggcaggggggcattgggatgggcgggggctcgcggacggagctgtcggccgtg
gaccggctgaagccaaagtgttcttcccaggacttctccatccgggagtggattgcccgc
gagcgccaccgcacctccaaccccgaggtcagcctggacttctctgaacaccatggggca
ctgctcctcctacgcaaacccgacccccagaaccctgaccaccctcaggcccaggaggct
ccgtcgtcatccccctcagaccccttctcaccacacccaactccagctgagctgctgaat
ggagacgcaggtccccagagtaaaagcctgaacctgtcggccactgcacacccacacaaa
ctctctggtgctcaggtggtccactctcgcttctaccagtacctgtga
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