Coregonus clupeaformis (lake whitefish): 121535357
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Entry
121535357 CDS
T08357
Name
(RefSeq) prominin-1-A isoform X2
KO
K06532
prominin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121535357
04090 CD molecules [BR:
cclu04090
]
121535357
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121535357
CD molecules [BR:
cclu04090
]
Proteins
121535357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Motif
Other DBs
NCBI-GeneID:
121535357
NCBI-ProteinID:
XP_041698316
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Position
2:34772756..34907991
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AA seq
890 aa
AA seq
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MWKTGLLLLFWGLLTSSELQQEETEPERRSQPRSGKLDFGYVPQGVYQTLAYYEPGVIGI
LFHMVHAFLYVVQPNPFPEDLVIKVAKDKFGAIQSEYQKPENIVLTLQAIYYETGFMVCA
VLGLLFMVLLPLVGLFFCLCRCCDNCGGEMHQRQRKNADCQRGLLTTLLFATSLVITAGV
LCAYAANQNLSSQLKGMRRLVSSNLRDLQSFTNETPTQIDYLIAQYATAKNKVLSDLDNV
GPLLGGKIHEELGKEVRPALDGALSMAVVKVERAIKAMRETKEALENVSVSLEVLQEATW
KLHFNLSLVRSSLNKTLNDPGCSDEDSDATTAQLCRSIRSSLAQLHVSANFTRLPDVNNQ
LESVNQLLKTDLSNIIQKGYSSFNDTPGMVSDQMRNVVEGARRMLDIIGTNISSFSKVFP
VHSTMANFTNFISHTHSKIEDSYPEIDQIDFYRWICCIGLCCMVVLILAFNFLAILCGSI
GYDKHASPTTRGCVSNTGGTLLMAGVGFSFLFSWILMGVVTATFLVGGNVEKLVCEPFHT
KQLFKVLDTPHLVNPEWRNFIPGYMYNDSDLDLTVESLYSNCKENRGIYSAMRLDKVFNV
TTFLNSSLDTKEVGKMFNNVKIDLRAIILLESEGKQNLIGFSETGVAEINYVAYLEEVNK
GVTQVDLLSYANELEAQTDLMPKGPLQTSLKGHANSLRQIHSQQVIPMEQAMSMLNQSIR
LLERTASDLPNKVTDVLATIEAAQYLISQNATQVVNQETEKYKQTIVGYFRQYIEWVRTS
LTMEVAACKPFSNIVDTVEIIACSFLVDSLNTFWFGLGCCALFLLPSIILSVKLAKFYRR
MDTEDVYDEIGQTAVNVHVILLVRERQKERQACLLWCGTTETTAHVTNNL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaccggtcttcttctcctcttttggggactattaacgtccagtgaactccag
caagaagaaacggagccggagcgccgaagtcagccacggtcggggaagttggattttggc
tatgtgcctcagggagtttaccaaaccctcgcctattacgaacctggagtaatagggata
ctgttccacatggtgcacgcttttctatacgtcgtgcagcccaacccgttccccgaagat
ctcgtcatcaaagtcgccaaggataaatttggagccattcagtcggaatatcagaagcca
gagaacattgttctgacactccaggccatctactatgagacaggcttcatggtgtgtgcc
gtgctcggcctgctcttcatggtcctgctgcccctggtcggcctcttcttctgcctgtgc
cgctgctgcgacaactgtggcggcgagatgcaccagcgccagcggaagaacgcagactgc
caacggggcctgctcaccacgctgctcttcgccacctcgctcgtcatcacggctggagta
ctgtgtgcgtatgcagctaaccagaacctgagctctcagctcaaaggcatgaggagactg
gtcagcagcaacctgagggacctgcagagctttaccaacgagacgccaacgcaaattgat
tacctaatagcacaatacgccactgccaagaacaaagtcctttctgacttagataatgtg
ggtcctctgcttggagggaaaattcatgaggaattgggaaaagaggtccgtcctgcactg
gacggagcgctcagtatggctgttgtcaaagtggagagggccattaaagccatgcgggag
accaaggaggccctggagaacgtgagtgtgtctctggaggttcttcaggaggcgacatgg
aagctccacttcaacctgagcctggtgcgctccagcctcaacaaaaccctcaacgacccg
ggctgcagcgacgaggactcggacgccaccaccgcccagctctgccgctccatccgcagc
tccctggcacagctccacgtcagcgccaacttcacccggttacctgatgtgaacaatcag
ctggaaagtgtgaatcaattgctaaagacagacctcagcaatatcattcaaaagggctac
tcctcattcaatgacactccaggcatggtgagtgaccagatgaggaacgtagtagaggga
gcccggcgcatgttggacatcatcggcaccaacatcagcagcttctccaaggtgttccct
gtacacagcactatggccaacttcaccaacttcatcagtcacacacactccaagatagaa
gattcctaccccgagatcgaccagattgacttctacaggtggatttgctgtatcggcctg
tgctgcatggtggttctcatcctggccttcaacttcctggccatactgtgtggctccata
ggatacgacaagcacgcctcccccaccacacggggctgtgtctccaacaccggcggcacc
ctgctcatggccggtgtgggcttcagcttcctcttctcctggatactgatgggagtggtg
accgccacctttctggtcgggggcaacgtggagaagctggtctgcgagcccttccacacc
aagcagctcttcaaggttttggacactcctcacctggtgaaccctgagtggaggaacttc
atccctgggtacatgtacaacgactcagacctggatctcacagtggaaagtctctacagt
aattgcaaagagaatagaggtatttactctgccatgcgcctggacaaagtcttcaatgtc
acaaccttcctaaactctagcctggacaccaaggaggtggggaagatgtttaacaatgtg
aagattgacctgagagctatcatcctgctggagtctgaggggaagcagaacctcattggc
ttctctgagacgggcgtcgccgagatcaactacgtagcctatctagaggaggttaacaaa
ggggtgactcaggtggacttactgtcgtacgccaatgagctcgaggcacagacagacctt
atgcccaaggggcccctccagacctctctaaagggccacgccaacagtctccggcagatc
cacagtcagcaggtcatccctatggagcaggccatgagtatgctgaaccagagcatcaga
ctactcgagaggacggcctcagacctgccgaacaaagtcactgatgtgctggcgaccatc
gaagcagcccagtatctaatctcccagaatgcaacacaagtcgtcaaccaggaaacggaa
aagtacaagcaaaccattgttggttacttcaggcaatacatagagtgggtcaggacttct
ctgaccatggaggtagcggcctgcaaacccttcagtaacatcgtggacacagtggagatc
atagcctgcagcttcttggttgactcattgaacacattctggtttggcctaggctgctgt
gccctattcctccttcctagcatcatcctgtcagtaaaactggcaaagttctaccgtagg
atggacacagaggatgtttatgatgaaattgggcaaactgctgtgaatgtacacgtgatc
cttttggtcagagagaggcaaaaagagaggcaagcatgtctgctttggtgtggtactact
gagacaactgctcatgtgactaacaacctctaa
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