Coregonus clupeaformis (lake whitefish): 121535372
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Entry
121535372 CDS
T08357
Name
(RefSeq) GREB1-like protein
KO
K27478
GREB1-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121535372
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_2nd
GREB1_C
GREB1_N
TAGT
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
121535372
NCBI-ProteinID:
XP_041698325
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All DBs
Position
21:complement(52400119..52484417)
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AA seq
1988 aa
AA seq
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MGNSYAGQLKSARFEEALHNSIKASLRSSSGDPQPIFTQLYLEPVQYPGNMEVIKPKVDL
YLPCGEPPGQDLLNGQASNGLEEMEDDNDSDTGSPPTPYLHGPSPDGCCTMDGFCQAGKD
LRLVSMTTEPIEVPAGFELVGAKSPSIPDHILVCAVDRRFLPDENGKNALLGFSGNCVGC
GEKGFRYFTEFSNHINLKLATQPKKQKHLKYYLVKNCQDALCKGRLICWKDCKTRQFSIS
SESTSKPNSSSSLSIKENGGTNRHSSSPFSLSDSPSTRIPPASSVFFSAQDLARECSFLK
PLASTPGTNTLPIVPTVLRVNGPTSGLGADGRPPLLSLSQVSLGTQGQGYRTSDPGDSPV
SSAMTSGPPKKRHRGWLPNPLVPVLPTAVPVPAIQPIVSSPGSVLAMPTPQPPVAGVLHP
QPVTAGETVIVPDNLLNFSGVRPVILIGHGTLPHFVGDIVVSPMLANCYKGNQLTEKTLS
SLGLNSSQLLSVETVILLTLQYLARLDSEQIPLREVFEQIVLKAMLVCPGGPSISPAQLP
WLARLEASVSGGSVQVLVTHNSLGEGISESLRSLCDVPPHQQCLPTYVVIVFASEMSGNE
FCVLVLGKYQARALAEGMLTTNEFLKEISYELITGKVSVLESNFKTTSLGHNLDKQLVHI
QRLRKGQVIQPFQGDVTDHIQSQVAATMVPPSESELLSEMFQIHPPQLSEMFQIHPPQLS
EMFQIHPPQLSEMFQIHSPQLSVARSLLSLVCSIADSGSQSLDLGRFCKVDFLILVPPSH
VLVNQTAHRIRQSGVLVDLGMEDASSAHQRSDKYVVRLDGDFHTKMEAFMRKVKQNPYTL
FVLIHDNSHVDVTSALCGSVCHGELQGLADKVVNCQEVLEALNLLVLQVSCFPFALQTRQ
SRISVHNEVHWPVNTDSLGELSPKELVYFGLRDYSSSLRWGVASPILRCDDSFEKMVNTL
LERHPHLHSMVIRSYLLIQQYTEAMMALTSSPSLRDHITPETLAMVEDLISAPGREGTRG
RGHMLLVRVPSLQLAMLARERLEDVRDKLGLQFCFAVLLGSPAAELSLPRHFANRLRAWQ
GCESEDWVPQTYEDLEGLPCVVILTGKDPLGETFPRSLKYCDLRLIDSSYQTRTALEQEV
GLACSYVSLGMVQEPHRAMAPRDQETEKTNGPQGPDLELHVDLEKPQSNVSTATKASGSL
AENGVSSSEVPDSSQKSSTSSCPPGGKAGSIMMDYRTGLGTTSSSPCRVKQECDSPGNVA
PRPSNAPPSCSSSSSSLSSSSTQRPSQSTQCGRGSKSPRVSPRTVILSRAAYSLLAGESG
SQLSSFSLLPHADVSWSSPLRPLFTPNLQRAEQSLFYRQWTVARQHHADHEAPPGPHPRR
LLLSGPPQVGKTGAYLQFLRILFRMLIRLLEVDVYDEEELEETITDIAKATPPARTQWPD
IEEIRKLPFDLFPRDPKFRRASSVYTDKMPKGLKDPILEGESQMPVKRETVSIRLSMFAA
HNAFHHCEQCHHYREGSPATQLSECTFHAFTFCSSMLGEVQLHFIIPKAKEQHFIFSQQG
SHLESMRLPLVSAKDPSLLKSPIFTPTTGRQEHGLLNIFHAMEGTAHLHILVVKEYEMQH
YRKKWPNHILLVLPAMLNSAGVGAARSMIKELSYHNLELERHRLEEQGVKKQDVWPFIVM
MNDSCVLWNAHQPQYSSSDMANTRSSLTNVSMKTVLQHIEATPKISLYTMCGIRKWSSAL
ARRLPALPFSRCHLHDFVILNVDLTQNVQYDLNRYSCEEVDFNLRANSSGLLLCRFNHFS
LMKKHIPFGGHKDFLVKPKLMVMENPAPISPYQYVCAPDSEHTLLAAPAQFLLEKFLQSC
SHRLFPKAVQNSSNPVLSIDSFLNIGPEVSVCYVSSRPHSSNLDHQDLVFSGLLLYLCDS
FVISGLLKKFRFLKGATLCVICGDRNSLRQTIVRLELEDEWQFRLRDEFQTANCSEDRPL
YFLTGRHV
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcgtacgcagggcagctgaaatctgctcgcttcgaggaggccctccacaac
tctatcaaggcctccctacgctccagcagtggagacccacagcccattttcactcagcta
tacctggagcctgtccagtatcctggcaacatggaggttataaagcccaaggtggacctg
tacctgccgtgcggggagcctccgggtcaggatctgctgaacggccaggcctctaacggt
ctggaggagatggaggacgacaacgactctgacaccggcagccccccgacaccctaccta
catggcccctcgcccgacggctgttgcacaatggatggcttctgtcaggccggtaaggac
ctccgtctggtctccatgacgacagagccgatcgaagtcccagctggcttcgagttggtc
ggtgccaagtcccccagcatcccagaccacatcctggtgtgtgctgtggaccgacgcttt
ctgcctgatgagaacgggaaaaatgcacttttagggttttcagggaactgtgttggctgt
ggagagaaggggttccggtactttactgagttttccaaccacatcaacctgaagctggcc
acgcagcccaagaagcagaagcacttaaaatactacctggtgaagaactgtcaggatgct
ctgtgcaaaggacgcctcatctgctggaaagactgtaaaacgcgtcagttctccattagc
agtgagtccacctccaagcccaactcctcatcctccctgagcatcaaggagaacggaggc
accaacagacacagctcttcccccttctccctctcagactccccatctaccaggattccc
cctgcatcctctgtgttcttctcagcccaggacctggcccgagagtgcagcttcctcaag
cctctggcttctacccctgggaccaacactctaccaatagtgcccacggttctgagagtg
aatggtccgaccagcggactgggtgcagacggccgcccccccttactgagcctctcccag
gtgtctctgggaacccaaggacaggggtacagaacctcggacccaggagacagccctgtt
tcgtctgccatgacctcaggcccgcccaagaagcgccaccgcggttggctccccaacccc
ctggtgccagtcctccctacagccgtccctgtgcccgccatccaacccatcgtctcctcc
ccaggctctgtgctggccatgcctactcctcagccacctgtagcaggggtccttcatccc
caacctgtcactgccggagagactgtcatcgtccccgacaacctgctcaacttctcagga
gtccgccctgtcatcctcatcgggcatggtacgttaccacactttgtgggggacattgtg
gtgagccccatgctagcgaactgctataagggcaaccagctgactgagaagaccctgtcc
agtcttggactgaacagcagccaactgctcagtgtggagaccgtaatcctcctcaccctg
cagtacctggcaaggctagattcggagcagatccctctgagggaggtgtttgagcagatc
gtgctgaaggccatgttggtttgtccaggaggtccctctatctccccggcccagctgccc
tggctagcccgcctggaggccagcgtctcggggggcagcgttcaggtcctggtcacccac
aactccctgggggagggcatctccgagtccctgcgctcactctgcgacgtgccgccccac
caacagtgcctgcccacctacgtggttattgtgtttgcctccgagatgagcggcaacgag
ttctgtgtgctcgtgctggggaagtaccaggcgagagcgctagctgaggggatgctcacc
accaatgagttcctgaaggagatcagctacgagctcataacagggaaagtcagtgtcctg
gagtctaacttcaaaaccacatcactagggcacaacctggacaagcagctggtacatatc
cagcggctacggaagggccaggtcatccagcccttccagggcgatgtcaccgaccacatc
cagtcccaggtggcagccaccatggtacctccctccgagtcagagctgctgagtgagatg
tttcagatccaccctccccagctgagtgagatgtttcagatccaccctccccagctgagt
gagatgtttcagatccaccctccccagctgagtgagatgtttcagatccactctccccag
ctgagtgtagccaggagcctgctctccctggtgtgttccatagcagactcaggcagccag
agtctggacctgggacgcttctgcaaggtggacttcctgattctggttcctccgtctcac
gtcctggtgaaccagaccgctcatcgcatccgacaatcaggagtgcttgtggacctgggt
atggaggatgcttcctcagcccaccagaggtcagacaagtacgtggtgcgtctagacgga
gacttccacaccaagatggaggccttcatgaggaaagtcaaacagaacccctacaccctg
ttcgtcctcatccacgacaactcccacgtggacgtgaccagtgccctgtgcggctcggtg
tgccacggggagcttcagggtctggctgacaaggtggtaaactgccaggaggtcctggag
gccttgaacctgctggtgctgcaggtcagctgcttcccctttgccctgcagacaagacag
tcccgcatcagtgttcacaacgaggtgcactggccagtcaacacagacagcctgggggag
ctctctcctaaggagctagtgtactttggcctgagggactacagcagctctctgcggtgg
ggggtggccagtcccatcctgcgctgtgacgactccttcgagaagatggtcaacacgctg
cttgagagacatccccacctacacagcatggtgatcaggagctacctgttgatccagcag
tacacggaagcaatgatggctctgacctcctctccttctctacgggaccacatcaccccc
gagaccctggccatggtggaggatctgatcagtgccccgggccgggaggggaccaggggc
cggggccacatgctgctggtccgggtgccctctctgcagctagccatgctggcccgggag
cgcctggaggacgtcagggacaagctgggtctccagttctgcttcgccgtactgctgggg
agccctgccgccgagctcagccttccacgacacttcgctaaccgactcagggcctggcag
ggctgtgaaagtgaggactgggtccctcaaacctatgaggatctggagggtcttccctgc
gtcgtcatcctcactggaaaagaccctctgggagagaccttcccaaggtccctgaagtac
tgtgatctgcgtctgatcgactccagctaccagacacgtacggccctggagcaggaggtg
ggtctggcctgctcctacgtgtccctagggatggtgcaggagccccacagggctatggcc
cccagggaccaagagacagaaaagaccaacggcccccagggcccagacctagagcttcac
gtggacctggagaagccccagagcaatgttagcactgctactaaagcctccggctctctg
gcagagaacggggtcagctcttctgaagtccctgactcctcccagaagtcctccacctcc
tcctgtccccccggaggcaaggcaggcagcatcatgatggactacaggacaggtctgggc
acgacctcatcctccccctgccgggtcaaacaggagtgtgactccccgggtaatgtcgcc
ccccgcccctccaacgcccctccctcctgctcctcctcttcctcctccctctcctcttcc
tctacccagcgccccagccagtccacgcagtgtggccggggcagcaagtcacctcgagtc
tctccccggactgtcatactgtcccgcgcggcctacagcctcctggctggagaatcaggg
agccagctgagctccttctccctgctgcctcacgccgatgtgagctggagcagcccgctg
aggcccctcttcacacctaacctccagagggcagagcagagcctcttctacagacagtgg
actgtagccaggcagcaccatgccgaccacgaggctcccccagggccacacccacgacgc
ctgctgctcagtggtcccccacaggtggggaagaccggtgcctacctgcagtttctacgc
atcctgttccgcatgttgattagactgctggaggtggatgtgtacgatgaagaggagctg
gaggaaacgatcacggacatcgccaaggccacacccccagccaggacccagtggccagac
atcgaggagatccgcaaactgcccttcgacctcttccccagagaccctaagttcagaagg
gccagttccgtttacactgataagatgccaaagggcttgaaagatcctatactggaagga
gagagccaaatgcctgtaaagagggagactgtgtcgatacggctgagtatgttcgcggct
cacaatgcatttcaccattgtgagcagtgtcaccattatcgtgaaggaagccctgccaca
cagctgtcggagtgcaccttccacgctttcacgttctgctcgtccatgctgggagaggtg
cagctccacttcatcatccccaaggccaaggagcagcactttatcttcagccagcagggc
agccacctggagagcatgaggttgcccctcgtctctgctaaggaccccagtctgttgaag
agccccatcttcaccccgaccacggggcgtcaggagcacggccttctcaacattttccac
gccatggagggcactgcccacctccacatcctggtggtcaaggagtacgagatgcaacac
tacaggaaaaaatggcccaaccacatcctgctggtgctgccagccatgttgaacagcgcc
ggagtcggggcggctcggtcgatgatcaaggagctgtcataccacaacttggagctggag
aggcaccgtctggaggagcagggggtcaagaagcaggacgtctggcccttcatagtcatg
atgaacgactcctgtgtgctctggaacgcacaccaaccccagtacagcagcagtgatatg
gcaaacacaaggtccagtctgaccaacgtgtctatgaagacggtgctgcagcacatcgag
gctactcctaagatctccctgtacaccatgtgtggcatccgcaagtggagcagcgccctg
gcccgccgcctgcctgccctgcccttttcccgatgccacctccatgactttgtcatactc
aacgtggacctgacacagaacgtccagtacgacctcaacaggtacagctgtgaggaggtg
gacttcaacctgagagccaatagcagtggtctgctgctctgtcgtttcaaccacttcagc
ctgatgaagaaacacattccctttggaggacacaaggacttcctggtcaaacccaaactc
atggtgatggagaacccagcccccatcagcccgtaccagtatgtctgtgccccagacagt
gaacacaccctcctggctgccccggctcagttcctcctagagaagttcctccaaagctgc
agccacagactgttccccaaggcagtacagaacagcagcaaccctgtgctgtccatagac
agtttcctcaacataggcccagaggtgtcagtgtgctatgtcagctccagaccacactcc
tctaacctggaccaccaggatctggtcttcagcggccttctgctctacctgtgtgactcc
ttcgtcatctctggcctcctcaagaagtttcgctttctcaaaggtgctacgttgtgtgtg
atctgcggggaccgtaactctctgcgtcagaccatcgtgcggctggagctggaggacgag
tggcagttccgcctgagggatgagttccagacggccaactgcagcgaggaccggcccctc
tacttcctcaccggacgccatgtttaa
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