Coregonus clupeaformis (lake whitefish): 121535374
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Entry
121535374 CDS
T08357
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04517
IgSF CAM signaling
cclu04519
Cadherin signaling
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121535374
04519 Cadherin signaling
121535374
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121535374
09142 Cell motility
04810 Regulation of actin cytoskeleton
121535374
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
SRA1
C1_2
SatS_C
ANC1_spectrin
SH2_1
DUF2935
Motif
Other DBs
NCBI-GeneID:
121535374
NCBI-ProteinID:
XP_041698327
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Position
21:complement(47193815..47314946)
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AA seq
858 aa
AA seq
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MEYWRQCALWLISCKVLPPNHRVTGDSAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKEI
NLRPQMSQFLCLKNIRTFLYSCCEVFGMKKTDLFEAFDLFDVRDFGKVMDTLSKLSYSTV
AQQAGIKPFPTEESLKDEDIYSHLKDLMDENVLEDEEELYAPVYGMDDTDEGGEIYEDLM
RTEQHPTLKQAEQNVRSCCLSEIKQTEERYTETLESIEKYFLNPLKKFVSAAEIDKVFVN
IPDLVKVHKNLMLEVQDSIVNKNALNLYQIFIAYKDRLLIYGIYCSNVEISIAVLDFICK
EKEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTPDAADKNNLKMA
LDAMKDLAQYVNEVKRDKETLREIDQYQRSIENLNQPLVNYGRPKGDGEVRMVSNVDKRK
QDRHIFLFDVAVIVCKRRGDNYEMKDVIDLNYFKITNNPTQDGESKKWFYGFYLTHQRGQ
SGFEFFFKTKELKKKWLDQFDMAISNIRPENSSNNSHQFKMHTFDRITTCSSCHLLLRGI
FNQGYLCLKCGLGAHKECLGRLGVCGRTDSATLRPERAPTVRKQADPGLPRMLVIRDYCG
IPSPQSAPPLTIHAGDIIELVSANLHSSWWQGKILATREIGFFPSDAVRPCPCVPKPVDY
SAQLWFAGPMERHQAEVVLMDRENSTYLIRHRTRECNEYAISFKFDDEVKHIKILTKNGC
FYIAETRLFKTVLELVDYYKQHSLREGFRSLDTTLQVPFREPGNGNDMPQGIKHTGAVCP
GSWGFVPPSSTPFWSVFSPRVVGIAVACYDFSSRDTRELSLQEGDIVKIYTKMANGWWRG
EVNGRVGWFPSTYVEEED
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggcggcagtgcgcgctgtggctgattagctgcaaggtgctgcctccgaac
catcgggtaacgggggacagtgcccaggtatttgacctggctcagacgctccgggacggg
gtgctgctctgtcagctgctcaacaacttgaaaccccacaccatcaacctgaaggagatt
aaccttcggccacagatgtctcagttcctgtgcttgaaaaatatccggaccttcctgtac
tcctgctgtgaggtgtttgggatgaagaagactgatctgttcgaggccttcgacctgttt
gatgtccgggactttggaaaggtgatggacactctttccaaactctcctactccacggtc
gctcaacaggcaggaatcaagccctttccaacagaggagagtctgaaagacgaggatatt
tacagtcatctgaaggacctgatggatgagaacgttctagaggatgaggaggagctgtat
gctccagtgtacgggatggatgacactgatgaaggaggagagatctacgaagacctgatg
aggacagaacagcaccctacactgaagcaggctgagcagaatgtgagaagctgctgcctc
tcagagatcaaacaaacagaggagagatacacagagaccctggagtctatagagaagtac
ttcctgaatccactgaagaaatttgtctctgcggcagaaatcgacaaggtcttcgtcaac
attccagacctggtgaaagtccataagaatctgatgctggaggtgcaagactccattgtc
aacaagaacgccttaaacctctaccagatcttcatcgcctacaaggacaggttactcatt
tatggaatctactgcagcaacgttgagatatccattgcggtgttggacttcatctgtaag
gagaaagaagacgttcgactaaagctagaggaatgttctaaaagagccaacaatgggaag
ttcactctgagagatctactggtggttcccatgcagagagtcctgaagtaccatctccta
ctacaggagctggtcaaacacactcccgacgcagccgacaagaacaacctgaagatggct
ctggatgccatgaaggacctggcacagtatgtcaatgaggtgaagagagacaaagagact
ctgagggagatcgaccagtatcaacggtccatcgagaacctgaaccagcccctggtgaac
tatggacggcccaagggggacggagaggtccgcatggtgtctaacgttgacaagaggaaa
caagacagacatatcttcctgtttgacgtggctgtgatcgtctgcaagagacgaggagac
aactatgagatgaaggatgtgatcgacctcaactactttaagatcaccaacaaccccacc
caggatggagagagcaagaagtggttctatgggttctacctgacccatcagcgggggcag
agcggcttcgagttcttcttcaagaccaaggagctgaagaagaaatggctggaccagttt
gacatggccatatccaacatcagaccagagaactccagtaacaactcccaccagttcaag
atgcataccttcgacagaatcactacctgtagctcctgtcacctgctcctcaggggtatc
ttcaaccagggctatctctgtcttaagtgtggactaggagctcataaggagtgtctgggc
agactgggcgtctgtggaagaactgattctgccacgctgaggcctgagagggctccgacg
gtgcggaaacaagcagacccaggtctccccaggatgctggtgatcagagactactgtggt
atcccctctccccagagtgcccccccattgaccatccatgctggggacatcatcgagctc
gtcagtgccaacctacacagctcctggtggcagggcaagatcttggcgacgagagagatt
ggcttctttcccagcgatgccgttaggccctgcccatgtgtgcccaagccagtggattac
tcagcccagctgtggtttgcggggccgatggagaggcaccaggcggaggtagtgctgatg
gacagagagaacagcacctacctgatcagacacaggaccagagagtgcaacgagtatgcc
atcagtttcaagttcgacgacgaagtcaagcacatcaagatcctgaccaagaatggatgc
ttttacatcgcagagaccaggctgtttaagactgtgttggaactggtggattactacaag
cagcattctctgagggagggcttcaggagtctggacacaacactgcaggtacctttcaga
gagcctggcaacgggaacgacatgccccaaggcatcaaacacactggtgctgtctgtcct
ggcagctggggttttgttcctccttcctccactccgttctggtcagtattctctcccagg
gtggtaggcatagcggtggcatgctacgacttcagctccagagacaccagagagctgtct
ctacaggagggagacatagtcaagatctacaccaagatggctaacggctggtggagggga
gaggtcaacggcagggtgggctggtttccctctacatatgtggaagaggaggactga
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