Coregonus clupeaformis (lake whitefish): 121535374
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Entry
121535374 CDS
T08357
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121535374
09142 Cell motility
04810 Regulation of actin cytoskeleton
121535374
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
C1_2
SH2_1
SRA1
ANC1_spectrin
DUF2935
Motif
Other DBs
NCBI-GeneID:
121535374
NCBI-ProteinID:
XP_041698327
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Position
21:complement(47193815..47314946)
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AA seq
858 aa
AA seq
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MEYWRQCALWLISCKVLPPNHRVTGDSAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKEI
NLRPQMSQFLCLKNIRTFLYSCCEVFGMKKTDLFEAFDLFDVRDFGKVMDTLSKLSYSTV
AQQAGIKPFPTEESLKDEDIYSHLKDLMDENVLEDEEELYAPVYGMDDTDEGGEIYEDLM
RTEQHPTLKQAEQNVRSCCLSEIKQTEERYTETLESIEKYFLNPLKKFVSAAEIDKVFVN
IPDLVKVHKNLMLEVQDSIVNKNALNLYQIFIAYKDRLLIYGIYCSNVEISIAVLDFICK
EKEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTPDAADKNNLKMA
LDAMKDLAQYVNEVKRDKETLREIDQYQRSIENLNQPLVNYGRPKGDGEVRMVSNVDKRK
QDRHIFLFDVAVIVCKRRGDNYEMKDVIDLNYFKITNNPTQDGESKKWFYGFYLTHQRGQ
SGFEFFFKTKELKKKWLDQFDMAISNIRPENSSNNSHQFKMHTFDRITTCSSCHLLLRGI
FNQGYLCLKCGLGAHKECLGRLGVCGRTDSATLRPERAPTVRKQADPGLPRMLVIRDYCG
IPSPQSAPPLTIHAGDIIELVSANLHSSWWQGKILATREIGFFPSDAVRPCPCVPKPVDY
SAQLWFAGPMERHQAEVVLMDRENSTYLIRHRTRECNEYAISFKFDDEVKHIKILTKNGC
FYIAETRLFKTVLELVDYYKQHSLREGFRSLDTTLQVPFREPGNGNDMPQGIKHTGAVCP
GSWGFVPPSSTPFWSVFSPRVVGIAVACYDFSSRDTRELSLQEGDIVKIYTKMANGWWRG
EVNGRVGWFPSTYVEEED
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggcggcagtgcgcgctgtggctgattagctgcaaggtgctgcctccgaac
catcgggtaacgggggacagtgcccaggtatttgacctggctcagacgctccgggacggg
gtgctgctctgtcagctgctcaacaacttgaaaccccacaccatcaacctgaaggagatt
aaccttcggccacagatgtctcagttcctgtgcttgaaaaatatccggaccttcctgtac
tcctgctgtgaggtgtttgggatgaagaagactgatctgttcgaggccttcgacctgttt
gatgtccgggactttggaaaggtgatggacactctttccaaactctcctactccacggtc
gctcaacaggcaggaatcaagccctttccaacagaggagagtctgaaagacgaggatatt
tacagtcatctgaaggacctgatggatgagaacgttctagaggatgaggaggagctgtat
gctccagtgtacgggatggatgacactgatgaaggaggagagatctacgaagacctgatg
aggacagaacagcaccctacactgaagcaggctgagcagaatgtgagaagctgctgcctc
tcagagatcaaacaaacagaggagagatacacagagaccctggagtctatagagaagtac
ttcctgaatccactgaagaaatttgtctctgcggcagaaatcgacaaggtcttcgtcaac
attccagacctggtgaaagtccataagaatctgatgctggaggtgcaagactccattgtc
aacaagaacgccttaaacctctaccagatcttcatcgcctacaaggacaggttactcatt
tatggaatctactgcagcaacgttgagatatccattgcggtgttggacttcatctgtaag
gagaaagaagacgttcgactaaagctagaggaatgttctaaaagagccaacaatgggaag
ttcactctgagagatctactggtggttcccatgcagagagtcctgaagtaccatctccta
ctacaggagctggtcaaacacactcccgacgcagccgacaagaacaacctgaagatggct
ctggatgccatgaaggacctggcacagtatgtcaatgaggtgaagagagacaaagagact
ctgagggagatcgaccagtatcaacggtccatcgagaacctgaaccagcccctggtgaac
tatggacggcccaagggggacggagaggtccgcatggtgtctaacgttgacaagaggaaa
caagacagacatatcttcctgtttgacgtggctgtgatcgtctgcaagagacgaggagac
aactatgagatgaaggatgtgatcgacctcaactactttaagatcaccaacaaccccacc
caggatggagagagcaagaagtggttctatgggttctacctgacccatcagcgggggcag
agcggcttcgagttcttcttcaagaccaaggagctgaagaagaaatggctggaccagttt
gacatggccatatccaacatcagaccagagaactccagtaacaactcccaccagttcaag
atgcataccttcgacagaatcactacctgtagctcctgtcacctgctcctcaggggtatc
ttcaaccagggctatctctgtcttaagtgtggactaggagctcataaggagtgtctgggc
agactgggcgtctgtggaagaactgattctgccacgctgaggcctgagagggctccgacg
gtgcggaaacaagcagacccaggtctccccaggatgctggtgatcagagactactgtggt
atcccctctccccagagtgcccccccattgaccatccatgctggggacatcatcgagctc
gtcagtgccaacctacacagctcctggtggcagggcaagatcttggcgacgagagagatt
ggcttctttcccagcgatgccgttaggccctgcccatgtgtgcccaagccagtggattac
tcagcccagctgtggtttgcggggccgatggagaggcaccaggcggaggtagtgctgatg
gacagagagaacagcacctacctgatcagacacaggaccagagagtgcaacgagtatgcc
atcagtttcaagttcgacgacgaagtcaagcacatcaagatcctgaccaagaatggatgc
ttttacatcgcagagaccaggctgtttaagactgtgttggaactggtggattactacaag
cagcattctctgagggagggcttcaggagtctggacacaacactgcaggtacctttcaga
gagcctggcaacgggaacgacatgccccaaggcatcaaacacactggtgctgtctgtcct
ggcagctggggttttgttcctccttcctccactccgttctggtcagtattctctcccagg
gtggtaggcatagcggtggcatgctacgacttcagctccagagacaccagagagctgtct
ctacaggagggagacatagtcaagatctacaccaagatggctaacggctggtggagggga
gaggtcaacggcagggtgggctggtttccctctacatatgtggaagaggaggactga
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