KEGG   Coregonus clupeaformis (lake whitefish): 121535427
Entry
121535427         CDS       T08357                                 
Name
(RefSeq) ras-related protein Rab-8A
  KO
K07901  Ras-related protein Rab-8A
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140  Autophagy - animal
cclu04144  Endocytosis
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121535427
   04140 Autophagy - animal
    121535427
  09144 Cellular community - eukaryotes
   04530 Tight junction
    121535427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121535427
   03036 Chromosome and associated proteins [BR:cclu03036]
    121535427
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121535427
   04031 GTP-binding proteins [BR:cclu04031]
    121535427
Membrane trafficking [BR:cclu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    121535427
 Autophagy
  Other autophagy associated proteins
    121535427
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    121535427
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121535427
  Exosomal proteins of other body fluids (saliva and urine)
   121535427
  Exosomal proteins of colorectal cancer cells
   121535427
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    121535427
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU SRPRB MMR_HSR1 Septin DUF3963 Tor_FN3_2nd AAA_7
Other DBs
NCBI-GeneID: 121535427
NCBI-ProteinID: XP_041698415
LinkDB
Position
21:53895298..53897951
AA seq 206 aa
MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQ
IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLG
NKCDINDKRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKLEGS
SPQGSSHKVKISQPQKKSSFFRCVLL
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgaagacatacgattatttgtttaagttgctgctaatcggagactcaggtgtcggg
aagacctgcgtgttgttcaggttctcagaggatgcctttaactcaacattcatctccacc
ataggcattgactttaagattagaacaatagaactagacggcaagaagataaagttacag
atatgggacacagcagggcaggagcgatttcgaacaatcacaacagcgtactacagaggc
gcgatgggtatcatgctagtctacgacatcaccaacgagaagtccttcgaaaacatcaag
aactggatacggaacatagaggagcatgcatcggctgatgttgagaagatggtccttggt
aacaaatgtgacatcaacgacaaacggcaggtgtccaaagacaggggagagaagctggcg
ctggagtacggtatcaagttcatggagaccagtgcaaaggccaatatcaatgtggaaaac
tcgtttttgacacttgccagagacatcaaatcaaagatggacacaaaattagagggcagc
agtccccaggggagcagccacaaggtgaagatctctcagccccagaagaagagcagcttc
ttccgctgtgtcctactgtga

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