KEGG   Coregonus clupeaformis (lake whitefish): 121535452
Entry
121535452         CDS       T08357                                 
Name
(RefSeq) cullin-3
  KO
K03869  cullin 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120  Ubiquitin mediated proteolysis
cclu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121535452
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    121535452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121535452
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121535452
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     121535452
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121535452
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 121535452
NCBI-ProteinID: XP_041698468
LinkDB
Position
21:complement(55499318..55524743)
AA seq 766 aa
MSNLKGSVKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLRQVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLEGRSVYEEDFESPFLEMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVLHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGSADLNATFHGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
ILFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKRMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcagcgtcaagaaggacaccaagatgaggataagagcctttcct
atgacgatggacgagaagtatgtcaacaacatctgggaccttctgaagaacgccatccag
gagatccagaggaagaacaacagtgggctgagcttcgaggagctctacaggaatgcctac
accatggtgctgcataagcacggcgagaagctctacacgggcctgcgccaggtcgtcacc
gagcacctcatcaacaaagtacgggaagatgtcctaaactcgttaaacaataactttctg
caaactttgaatcaagcgtggaacgaccaccagacggccatggtcatgatcagagacatc
ctcatgtacatggaccgggtgtacgtgcagcaaaacaacgtggagaacgtctacaacctg
ggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctgcgc
cagaccctgctggacatgatcgcacgcgagaggaagggagaggtggtggacaggggagcg
atcaggaacgcctgtcagatgctgatgattctcggcctggagggcaggtctgtgtacgag
gaagactttgagtcccccttcttagaaatgtctgcagaattcttccagatggagagccag
aagttcctagcggagaacagtgccagtgtgtacatcaagaaggtggaggccaggatcaac
gaggagatagagcgggtgttgcactgcctggacaagtccacagaggagcccatcgtcaag
gtggtggagcgggagctcatttccaaacacatgaagaccatcgtggagatggagaactct
ggcctggtccacatgctcaagaatggcaagacagaagacctgggctgcatgtacaagctg
ttcagccgtgtgcctaacggcctgaagaccatgtgtgagtgtatgagctcctacctgagg
gagcagggaaaggctctggtgtcagaggagggtgagggcaagaaccctgtcgactatatc
cagggcctgttggacctaaagacgcggttcgaccgcttcctcctggagtcgttcaacaac
gaccggctcttcaagcagactatcgccggagactttgagtacttccttaacctcaactcc
cgctccccagaatacctctccctcttcatcgacgacaagctcaagaagggagtcaaagga
ctgacagagcaggaggtggagtccatcctggacaaggccatggtgctgttccggttcatg
caggagaaggatgtgtttgagagatactacaaacagcacctagccaggaggctgctcacc
aacaagagcgtctctgacgactctgagaagaatatgatctccaagctcaagaccgagtgt
ggctgtcagttcacctctaaactggaagggatgttcagagacatgagcatctccaacacc
accatggacgagttcagacaacacctacagtccacgggggtgtctctagggggcgtcgac
ctcacagtaagagtgctcaccactggctattggcccacacagtcggccacgcccaaatgc
accatccccccctcccccagacacgccttcgaggtcttcagaaggttctacttggccaaa
cacagcggcagacagttgacccttcagcaccacatgggctcagccgacctcaacgcaacc
ttccacggccccatcaagaaggaggatggttcggaggtaggagtgggaggggcccaggtg
acgggctctaacaccaggaaacacatactgcaggtgtcaaccttccagatgaccatcctc
atactcttcaacaacagagaaaagtccacgttcgaggagatccagcaggagacagacata
ccggagagggagctggtgcgagcgcttcagtcgctggcctgcgggaagcccacccagcgc
gtcctcaccaaggagcccaagtccaaggagattgagaacggccacgtgtttacagtcaac
gatcagtttacctctaagctgcacagagtcaaaatacagacagttgctgctaagcagggc
gagtcggaccctgagaggaaggaaacacggcaaaaggtggacgacgacaggaagcatgag
atcgaggcggccatagtccgcatcatgaagtccaggaagaggatgcagcacaacgtcctg
gtagcagaggttacccagcagctgagggcccggtttctccccagtcccgtggtcattaag
aagcgcattgaaggactaatagagagagaatacttggcacggacgcctgaggaccgcaaa
gtctacacctacgttgcataa

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