Coregonus clupeaformis (lake whitefish): 121535486
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Entry
121535486 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535486
04121 Ubiquitin system [BR:
cclu04121
]
121535486
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121535486
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121535486
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121535486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-RING_16
zf-Nse
DUF8608
zf-RING-like
HypA
C1_2
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
121535486
NCBI-ProteinID:
XP_041698544
LinkDB
All DBs
Position
21:complement(40164269..40168726)
Genome browser
AA seq
323 aa
AA seq
DB search
MFPLGCLVENQKMAEAPPRPCRFFCHRCSAEINPRLPDYTCPRCESGFIEALSVERSTEN
GSTSTASTSDQTRPTFESMDHQHMFTFPPGYGQFALGILGENFDLRAGLPAEDNRETENR
REREIASRQRYSARQPQGRHMQRRPGQRYEGVPTLEGILQQLVNGIIAPTAMPNIGMGPW
GMLHSNPMDYAWGANGLDSIITQLLNQFENTGPPPADRERIKSLPSIQITEEHVGSSLEC
SVCKEDYSVGETVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMN
SSPSSSSSSSSSSPSNENAANNS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttccctctcggttgtctggtagagaatcagaagatggctgaagctcccccacggccc
tgccggtttttctgtcaccgatgttcagcagagatcaaccctcgtctcccggattacacc
tgtccacggtgtgaatctggcttcattgaagcgctatcagtggagagaagcactgaaaat
gggtccacatccactgcctccacaagcgatcagacccgtccgacttttgagagtatggac
caccagcacatgtttacatttccgcccggatatggccagttcgctctggggattcttggc
gagaatttcgacctccgagcggggctgccggcagaagataaccgcgagacagagaaccgg
cgggaacgggagatagcgtcacggcaacggtacagcgcccggcaaccacagggacgacac
atgcaacggcgaccgggacagagatacgagggagtgcccacattagagggaatcctccag
cagctagtgaatggaatcatagcacccacagccatgccgaacattggaatgggaccatgg
ggcatgctacactcaaatccaatggactacgcttggggtgccaatggacttgattctatc
attacccagttattgaatcagtttgagaacacgggtcctcctcctgctgatagagagagg
ataaagagcctgcccagcatccagatcacagaggaacatgtgggttccagtttagaatgt
tccgtgtgcaaggaagactacagtgtaggggagactgtcaggcaacttccgtgcaatcac
ctgtttcacaatgactgtatagtaccatggctggaacagcacgacacatgtccagtgtgc
agaaagagcctcagtggacagaacacagccacggaccccccgggactttcaggaatgaac
tcctccccttcctcctcctcgtcatcctcctccagctccccaagtaatgagaacgctgcc
aataactcctag
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integrated database retrieval system
