Coregonus clupeaformis (lake whitefish): 121535493
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Entry
121535493 CDS
T08357
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
cclu04120
Ubiquitin mediated proteolysis
cclu04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121535493
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121535493
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
121535493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121535493
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
121535493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_SCAP
ELYS-bb
Ge1_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121535493
NCBI-ProteinID:
XP_041698553
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All DBs
Position
21:39991211..39998964
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AA seq
495 aa
AA seq
DB search
MDQDYECRLLRQINIQNENASPLKAIDAVRALTPTNSPLSSPSKHGDRFIPSRAGANWSV
NFHRINENEKSLNQNRKTKDGTTDTSKADGLAYSALLKNELLGAGIEKVQDPQSEDRRLQ
PSTPAKRSLFSYSVSAKRSLPEDGNTVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFKV
LDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWS
ERGNLVAVGTHKGYVQIWDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRVILQRDI
RAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAAV
KAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVSTH
GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMRS
TKESVSVLNLFTRIR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggactatgagtgtcggctgctcaggcagattaacatccagaacgagaacgcc
agccctttaaaggccatagatgcagtacgagcgctgacacccaccaactcccccctgtcg
tcaccaagcaaacatggcgaccgcttcatcccctcccgtgccggcgccaactggagcgtc
aacttccaccgcatcaacgagaacgagaagtctctcaatcagaacaggaagacaaaggat
ggtacaacagacactagcaaagcggacggcctggcgtactctgccctactgaagaacgag
ctgctgggggcgggcatagagaaggtccaagacccccagtcagaggaccgccgcctccag
ccctccacccccgccaagaggagcctcttcagttattctgtcagtgccaagcgatctcta
cccgaggatggcaacacagtctctccatactccctgtctcctgttagcagcaacagtcag
aagctgttacggtcgccaaggaaacccacgcgtaagatctctaagatccccttcaaggtg
cttgatgctccggagctgcaggatgacttctacctcaacctggtggactggtcctccctc
aacgtcctcagtgtcggcctgggaacctgcgtctacctctggagcgcctgcaccagccag
gtgacacgtctgtgtgacctgtcagtggagggggactctgtcacgtcagtgggctggtca
gagagggggaacttagtagcagtggggactcataagggctatgtacagatctgggatgcg
gcagcagggaagaagctgtctgtactggaggggcacacagccagagtgggtgcgttggcg
tggaatgccgaccagttgtcgtctggcagtcgtgatagggttatcctgcagagagacatc
cgagccccgcccctccagtcagaacgccgtctccagggacaccgacaggaagtctgcggc
ctcaagtggagcacagaccatcagctactggcctcagggggaaacgacaacaagctgctg
gtgtggaaccactccagtgttctcccggtgcagcagtacacggagcacctggcagcagtg
aaggccatcgcctggtccccccatcagcatggcctgctggcgtctggagggggcacggcc
gaccgctgcatccgtttctggaacaccctgacaggccagcccttgcagtgcaccgacaca
ggctcccaggtctgcaacctggcttggtccaagcacaccaacgaactggtaagcacacac
ggctactcccagaaccagatcttggtgtggaagtacccctccctcacacaggtagccaaa
ctcacaggccactcctacagagtgctctacctggcaatgtccccagacggagaggccatc
gtcacaggagccggagacgagacactgcgcttctggaacgtcttcagcaagatgaggtcc
accaaggagtctgtatctgttctgaacctgttcaccaggatccggtag
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