KEGG   Coregonus clupeaformis (lake whitefish): 121535522
Entry
121535522         CDS       T08357                                 
Symbol
ptprsb
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S
  KO
K06778  receptor-type tyrosine-protein phosphatase S [EC:3.1.3.48]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121535522 (ptprsb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121535522 (ptprsb)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121535522 (ptprsb)
Enzymes [BR:cclu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     121535522 (ptprsb)
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    121535522 (ptprsb)
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  Type II RPTP family
   121535522 (ptprsb)
SSDB
Motif
Pfam: Y_phosphatase fn3 Ig_DSCAM-DSCAML_C Ig_3 I-set Pur_ac_phosph_N Tc-R-P PTP-SAK DSPc Fn3_PTPRU Y_phosphatase3 fn3_2 Tissue_fac Ig_2 PTPlike_phytase ig PTP-NADK V-set Arylsulfotran_N TraE
Other DBs
NCBI-GeneID: 121535522
NCBI-ProteinID: XP_045061975
LinkDB
Position
21:38891728..39012835
AA seq 1365 aa
MGAARVHLQRAIRRHTRRRLHRSEGPVSHLESSLALDQNLPFRLPLPEAGSGALQIENSE
ETDQGKYECVATNSQGVRYSSPANLYVRELREVRRVPPRFSILPSNHEIMPSGSVNITCV
AVGSPMPYVKWMLGSEDLTPEDEMPVGRNVLELNGIRESANYTCVAMSSLGIIEATAQVS
VKTLPKPPGTPIVTETTPTSVTITWDSGNPDPVSYYIIQYRAKAPDSKYETVDSITTTRY
SIGGLYPNTKYEIRVSAFNSIGQGPSSTRVEARTGEQAPASPPRNVQARIISKNTVMVRW
EEPEEPNGQVKGYRVYYTMDPSQPMSLWQIHNVQDSTITTIQSLVPSETYTVRVLAFTSV
GDGPFSDPVHVKVLPGVPGQPGKFKVGKVTDTSIELTWEPSYIKEGIVNYELLYKPVKFG
SLEKLTFGPRASYTVEGLRANTEYSFSLAAISNKGIGAFTNELVQRTAQANVPRNFSVNL
ATKTSVLLTWEFPESPYPYHFTVEYNRQKMEVDARLRKAVIPNLQPDTDYDFKITSAEGN
MGGLRHRIYAKTSPPIAIRRPEIDHTRDTETTITIILPSLENRSPVKNLYVVVVPLRRAR
GVIRHLKSPDEMDLEELLKDSSQRQQKQADLRRAYISALFTPATLPAFFTLGDQLDYGGF
ENRALEPGQEYVFFILAELNGTTVKMYADSPYTDPVIAPDSDPQPLDAGDGLIWVVGPVL
AVVFIICIVIAILLYKNKPDSKRKDSEPGTKSLLGNAEMMAHHPTDPVEMRRINFQTPGM
MSHPPIPITELAEHTELLKANDNLCLSQEYESIDPSQQFTWEHSNLEVNKPKNRYANVIA
YDHTRVVLAPIEGSSPGILGSDYINANYIDGYRKQNAYIATQGPLAETFGDFWRMVWEQR
AASVVMMTRLEEKSRIKCDQYWPSRGSETYGMTQVTLLDTMELATFCVRTFSLHKSGCSE
LREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKACNPPDAGPVIAHCSAGVGRTGCFIVID
AMLERIRHERTADIYGHVTLMRSQRNYMVQTEDQYGFIHEALLEAVACGNTEVAARNLFS
YMQKLGKVESGEHVTGMELEFKRLANTKAHTSRFVSANLPCNKFKNRLVNIMSYETTRVC
LQPIRGLEGSDYINASYIDGYRQQRGYMATQGPLAETTEDFWRMLWEHNSTIVVMLTKLR
EMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTD
WPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYE
GAVDIFQTVKILRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAA
NT seq 4098 nt   +upstreamnt  +downstreamnt
atgggggctgcccgcgttcacctgcagcgggccatccgccggcatacgaggcgccgtctc
caccgcagtgaggggcctgtgtcgcacctggagtcgagtctggctctcgaccaaaacctg
cccttccgcctgcccctgccggaagctggctcaggtgccctccagatagagaacagtgag
gagacagaccagggaaagtatgagtgtgtggccactaactctcagggcgtgcgctactct
tcaccggccaacctgtatgtgcgagagctacgagaagtgcgtcgcgtgccccctcgtttc
tccatcctgccctccaaccatgagatcatgcccagcggcagcgtcaacatcacctgtgtg
gcggtgggttcgcccatgccctacgtcaaatggatgctgggtagtgaggacctgacacct
gaggacgagatgccggtgggacggaacgttctggagctcaacggtatcagggagtcggcc
aactacacctgcgtggccatgagtagtctggggattatagaggccaccgcacaggtgtca
gttaagactcttcccaagcctcccggtacccccatcgtcacagagacgactcccaccagt
gtcaccatcacctgggactccggtaaccccgacccggtgtcctattacatcatccagtac
cgggccaaggcgccagacagcaagtacgagacggtggacagtatcaccaccacaaggtac
agcattggagggctctaccccaacacaaagtatgagatcagggtgtcggccttcaacagc
attggccagggaccctcgtccacccgggtggaggccaggacaggggagcaggctccggct
agcccacccaggaacgtccaggccaggatcatctccaagaacactgtcatggttcgctgg
gaggaaccggaggagcccaacggacaggtgaaaggttaccgtgtgtactacaccatggac
ccatctcagcccatgagtctatggcagatccataatgttcaggacagcaccatcaccacc
atccagagcctggtaccctctgagacatacactgtcagagtcctggcctttacatctgtg
ggagacggacccttctctgaccctgtccatgtcaaagtgctgcccggagttccagggcag
ccagggaagttcaaagtgggcaaggtgacggacaccagtatagagctgacctgggaaccg
tcctacatcaaggagggcatcgtcaactacgaactgctctacaaacctgtcaagttcggc
agcctggagaagttgacgtttgggcccagggcgtcgtacacagtggagggtctgagggct
aacacggagtactccttctccctggctgccatttcaaacaaaggcatcggagcctttacc
aacgagctggtccagaggacagcacaagccaatgtcccgaggaacttctcagtgaacctg
gcgaccaagacgagtgttctcctgacctgggagttccctgagagcccctacccctaccat
ttcactgtggagtataaccggcagaagatggaggtggatgccaggctgaggaaagcagtg
atccccaacctgcagccagataccgactatgacttcaagatcacctctgctgagggcaac
atgggcgggctgaggcaccgcatctacgccaagacctctccaccaattgccatccgccgt
ccggagattgaccacacccgtgacacggagaccaccatcaccatcatcctgccctcgctg
gagaaccgcagccctgtcaagaacctgtatgtggtggtagttcctctgaggagggcgagg
ggggtcattagacatctcaagagcccagacgagatggacctggaagagttgttgaaggac
agcagtcagagacagcagaaacaggcagacttgcgcagagcctacatctcggccctcttc
acccctgctactctgcccgcctttttcactctgggggaccagctggactacggaggcttc
gagaaccgcgctctagaaccgggacaggagtatgtgttcttcatcctggcggaactcaat
ggcacgacagtgaagatgtatgcggacagtccgtacacagacccagtgatcgctccggac
tctgacccccagccgctggatgcgggggatggtctgatctgggtggtgggacccgtcctg
gctgtagtcttcatcatctgcatcgtcatcgccatcctgctctacaagaacaagccagac
agtaagaggaaggactctgagccaggcaccaagagccttctgggtaatgctgagatgatg
gcccaccaccccacagaccccgttgagatgagacgcatcaacttccagacccctggtatg
atgagccaccctcccattcccatcacagagctggctgaacacacagagctgctcaaggcc
aacgataacctgtgtctgtctcaggagtacgagtccatcgaccctagtcagcagttcacc
tgggagcactcaaacctggaggtgaacaagcccaagaaccgctatgctaacgtcatcgcc
tacgaccacacccgcgtcgtcctcgcccccatagaaggttcaagtccaggtatcctgggc
agtgactacatcaatgctaactacatagatggctacaggaagcagaatgcctacatcgcc
acacagggcccactggcagagacatttggggacttctggaggatggtgtgggaacagaga
gcagcctccgtggtcatgatgaccagactggaggagaagtcacggataaagtgtgaccag
tactggccgagccggggttcagagacctatgggatgactcaggtcaccctattggacact
atggaactggccaccttctgcgtacgcaccttctccctgcacaagagtggttgtagtgag
ctgagggaggtacgtcagttccagttcactgcctggccggaccacggtgtaccagagtac
cccaccccattcctggccttcctacgcagggttaaagcctgcaacccccctgatgctggt
cctgtcatcgcacactgcagtgcgggcgtgggtcgtaccggttgcttcatcgtgatcgac
gccatgctggaacggatcagacacgagcgcacggccgacatctacggtcacgtcactctg
atgaggtcacagcggaactacatggtgcagacggaagaccagtacggcttcatccacgag
gcgctgctggaagcagtggcttgtgggaacacggaggtggcggcccggaacctgttctcc
tacatgcagaagctgggcaaggtggagagtggagagcacgtcaccggcatggagctggag
ttcaagcgtctggccaacaccaaagcccacacgtctcggttcgtcagtgccaacctgcca
tgtaacaaatttaagaaccgcctggtcaacatcatgtcctatgagaccacccgcgtctgt
ctgcagccaatcagaggcctggaaggatcagattacatcaacgccagctacattgatgga
tacaggcagcagagaggttacatggctacccagggcccactggctgagaccacagaggac
ttctggaggatgctgtgggaacacaactctaccatcgtggtcatgctcactaaactgagg
gagatgggacgggagaagtgccatcagtactggcccgcagagcggtcagctcggtaccag
tactttgtagtggaccccatggctgaatacaacatgcctcagtacatcctcagagagttt
aaggtcaccgatgcaagggatggccaatcacggacagttcgtcagttccagttcaccgat
tggccagagcagggagttcctaaatctggagagggcttcatcgacttcattggccaggtg
cacaaaaccaaggagcagtttggacaggacggcccaatcagtgtccactgcagtgcgggt
gtggggcggaccggagtcttcatcactctgagtatcgttctggagaggatgcgctacgaa
ggagctgtggacatcttccagactgtcaagatactgaggacacaacgccctgccatggta
cagacagaggatgaataccagttctgctaccaggctgccctggagtacctggggagtttt
gaccactatgcagcctaa

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