Entry |
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Symbol |
ptprsb
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Name |
(RefSeq) receptor-type tyrosine-protein phosphatase S
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KO |
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Organism |
cclu Coregonus clupeaformis (lake whitefish)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cclu00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121535522 (ptprsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:cclu01009]
121535522 (ptprsb)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:cclu04515]
121535522 (ptprsb)
Enzymes [BR:cclu01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121535522 (ptprsb)
Protein phosphatases and associated proteins [BR:cclu01009]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121535522 (ptprsb)
Cell adhesion molecules [BR:cclu04515]
Immunoglobulin superfamily
Type II RPTP family
121535522 (ptprsb)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
21:38891728..39012835
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AA seq |
1365 aa
MGAARVHLQRAIRRHTRRRLHRSEGPVSHLESSLALDQNLPFRLPLPEAGSGALQIENSE
ETDQGKYECVATNSQGVRYSSPANLYVRELREVRRVPPRFSILPSNHEIMPSGSVNITCV
AVGSPMPYVKWMLGSEDLTPEDEMPVGRNVLELNGIRESANYTCVAMSSLGIIEATAQVS
VKTLPKPPGTPIVTETTPTSVTITWDSGNPDPVSYYIIQYRAKAPDSKYETVDSITTTRY
SIGGLYPNTKYEIRVSAFNSIGQGPSSTRVEARTGEQAPASPPRNVQARIISKNTVMVRW
EEPEEPNGQVKGYRVYYTMDPSQPMSLWQIHNVQDSTITTIQSLVPSETYTVRVLAFTSV
GDGPFSDPVHVKVLPGVPGQPGKFKVGKVTDTSIELTWEPSYIKEGIVNYELLYKPVKFG
SLEKLTFGPRASYTVEGLRANTEYSFSLAAISNKGIGAFTNELVQRTAQANVPRNFSVNL
ATKTSVLLTWEFPESPYPYHFTVEYNRQKMEVDARLRKAVIPNLQPDTDYDFKITSAEGN
MGGLRHRIYAKTSPPIAIRRPEIDHTRDTETTITIILPSLENRSPVKNLYVVVVPLRRAR
GVIRHLKSPDEMDLEELLKDSSQRQQKQADLRRAYISALFTPATLPAFFTLGDQLDYGGF
ENRALEPGQEYVFFILAELNGTTVKMYADSPYTDPVIAPDSDPQPLDAGDGLIWVVGPVL
AVVFIICIVIAILLYKNKPDSKRKDSEPGTKSLLGNAEMMAHHPTDPVEMRRINFQTPGM
MSHPPIPITELAEHTELLKANDNLCLSQEYESIDPSQQFTWEHSNLEVNKPKNRYANVIA
YDHTRVVLAPIEGSSPGILGSDYINANYIDGYRKQNAYIATQGPLAETFGDFWRMVWEQR
AASVVMMTRLEEKSRIKCDQYWPSRGSETYGMTQVTLLDTMELATFCVRTFSLHKSGCSE
LREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKACNPPDAGPVIAHCSAGVGRTGCFIVID
AMLERIRHERTADIYGHVTLMRSQRNYMVQTEDQYGFIHEALLEAVACGNTEVAARNLFS
YMQKLGKVESGEHVTGMELEFKRLANTKAHTSRFVSANLPCNKFKNRLVNIMSYETTRVC
LQPIRGLEGSDYINASYIDGYRQQRGYMATQGPLAETTEDFWRMLWEHNSTIVVMLTKLR
EMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTD
WPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYE
GAVDIFQTVKILRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAA |
NT seq |
4098 nt +upstreamnt +downstreamnt
atgggggctgcccgcgttcacctgcagcgggccatccgccggcatacgaggcgccgtctc
caccgcagtgaggggcctgtgtcgcacctggagtcgagtctggctctcgaccaaaacctg
cccttccgcctgcccctgccggaagctggctcaggtgccctccagatagagaacagtgag
gagacagaccagggaaagtatgagtgtgtggccactaactctcagggcgtgcgctactct
tcaccggccaacctgtatgtgcgagagctacgagaagtgcgtcgcgtgccccctcgtttc
tccatcctgccctccaaccatgagatcatgcccagcggcagcgtcaacatcacctgtgtg
gcggtgggttcgcccatgccctacgtcaaatggatgctgggtagtgaggacctgacacct
gaggacgagatgccggtgggacggaacgttctggagctcaacggtatcagggagtcggcc
aactacacctgcgtggccatgagtagtctggggattatagaggccaccgcacaggtgtca
gttaagactcttcccaagcctcccggtacccccatcgtcacagagacgactcccaccagt
gtcaccatcacctgggactccggtaaccccgacccggtgtcctattacatcatccagtac
cgggccaaggcgccagacagcaagtacgagacggtggacagtatcaccaccacaaggtac
agcattggagggctctaccccaacacaaagtatgagatcagggtgtcggccttcaacagc
attggccagggaccctcgtccacccgggtggaggccaggacaggggagcaggctccggct
agcccacccaggaacgtccaggccaggatcatctccaagaacactgtcatggttcgctgg
gaggaaccggaggagcccaacggacaggtgaaaggttaccgtgtgtactacaccatggac
ccatctcagcccatgagtctatggcagatccataatgttcaggacagcaccatcaccacc
atccagagcctggtaccctctgagacatacactgtcagagtcctggcctttacatctgtg
ggagacggacccttctctgaccctgtccatgtcaaagtgctgcccggagttccagggcag
ccagggaagttcaaagtgggcaaggtgacggacaccagtatagagctgacctgggaaccg
tcctacatcaaggagggcatcgtcaactacgaactgctctacaaacctgtcaagttcggc
agcctggagaagttgacgtttgggcccagggcgtcgtacacagtggagggtctgagggct
aacacggagtactccttctccctggctgccatttcaaacaaaggcatcggagcctttacc
aacgagctggtccagaggacagcacaagccaatgtcccgaggaacttctcagtgaacctg
gcgaccaagacgagtgttctcctgacctgggagttccctgagagcccctacccctaccat
ttcactgtggagtataaccggcagaagatggaggtggatgccaggctgaggaaagcagtg
atccccaacctgcagccagataccgactatgacttcaagatcacctctgctgagggcaac
atgggcgggctgaggcaccgcatctacgccaagacctctccaccaattgccatccgccgt
ccggagattgaccacacccgtgacacggagaccaccatcaccatcatcctgccctcgctg
gagaaccgcagccctgtcaagaacctgtatgtggtggtagttcctctgaggagggcgagg
ggggtcattagacatctcaagagcccagacgagatggacctggaagagttgttgaaggac
agcagtcagagacagcagaaacaggcagacttgcgcagagcctacatctcggccctcttc
acccctgctactctgcccgcctttttcactctgggggaccagctggactacggaggcttc
gagaaccgcgctctagaaccgggacaggagtatgtgttcttcatcctggcggaactcaat
ggcacgacagtgaagatgtatgcggacagtccgtacacagacccagtgatcgctccggac
tctgacccccagccgctggatgcgggggatggtctgatctgggtggtgggacccgtcctg
gctgtagtcttcatcatctgcatcgtcatcgccatcctgctctacaagaacaagccagac
agtaagaggaaggactctgagccaggcaccaagagccttctgggtaatgctgagatgatg
gcccaccaccccacagaccccgttgagatgagacgcatcaacttccagacccctggtatg
atgagccaccctcccattcccatcacagagctggctgaacacacagagctgctcaaggcc
aacgataacctgtgtctgtctcaggagtacgagtccatcgaccctagtcagcagttcacc
tgggagcactcaaacctggaggtgaacaagcccaagaaccgctatgctaacgtcatcgcc
tacgaccacacccgcgtcgtcctcgcccccatagaaggttcaagtccaggtatcctgggc
agtgactacatcaatgctaactacatagatggctacaggaagcagaatgcctacatcgcc
acacagggcccactggcagagacatttggggacttctggaggatggtgtgggaacagaga
gcagcctccgtggtcatgatgaccagactggaggagaagtcacggataaagtgtgaccag
tactggccgagccggggttcagagacctatgggatgactcaggtcaccctattggacact
atggaactggccaccttctgcgtacgcaccttctccctgcacaagagtggttgtagtgag
ctgagggaggtacgtcagttccagttcactgcctggccggaccacggtgtaccagagtac
cccaccccattcctggccttcctacgcagggttaaagcctgcaacccccctgatgctggt
cctgtcatcgcacactgcagtgcgggcgtgggtcgtaccggttgcttcatcgtgatcgac
gccatgctggaacggatcagacacgagcgcacggccgacatctacggtcacgtcactctg
atgaggtcacagcggaactacatggtgcagacggaagaccagtacggcttcatccacgag
gcgctgctggaagcagtggcttgtgggaacacggaggtggcggcccggaacctgttctcc
tacatgcagaagctgggcaaggtggagagtggagagcacgtcaccggcatggagctggag
ttcaagcgtctggccaacaccaaagcccacacgtctcggttcgtcagtgccaacctgcca
tgtaacaaatttaagaaccgcctggtcaacatcatgtcctatgagaccacccgcgtctgt
ctgcagccaatcagaggcctggaaggatcagattacatcaacgccagctacattgatgga
tacaggcagcagagaggttacatggctacccagggcccactggctgagaccacagaggac
ttctggaggatgctgtgggaacacaactctaccatcgtggtcatgctcactaaactgagg
gagatgggacgggagaagtgccatcagtactggcccgcagagcggtcagctcggtaccag
tactttgtagtggaccccatggctgaatacaacatgcctcagtacatcctcagagagttt
aaggtcaccgatgcaagggatggccaatcacggacagttcgtcagttccagttcaccgat
tggccagagcagggagttcctaaatctggagagggcttcatcgacttcattggccaggtg
cacaaaaccaaggagcagtttggacaggacggcccaatcagtgtccactgcagtgcgggt
gtggggcggaccggagtcttcatcactctgagtatcgttctggagaggatgcgctacgaa
ggagctgtggacatcttccagactgtcaagatactgaggacacaacgccctgccatggta
cagacagaggatgaataccagttctgctaccaggctgccctggagtacctggggagtttt
gaccactatgcagcctaa |