KEGG   Coregonus clupeaformis (lake whitefish): 121535524
Entry
121535524         CDS       T08357                                 
Name
(RefSeq) integrin alpha-6
  KO
K06485  integrin alpha 6
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382  Cornified envelope formation
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04514  Cell adhesion molecule (CAM) interaction
cclu04518  Integrin signaling
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121535524
   04514 Cell adhesion molecule (CAM) interaction
    121535524
   04518 Integrin signaling
    121535524
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121535524
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121535524
   04810 Regulation of actin cytoskeleton
    121535524
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121535524
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121535524
   04515 Cell adhesion molecules [BR:cclu04515]
    121535524
   04090 CD molecules [BR:cclu04090]
    121535524
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121535524
  Exosomal proteins of breast milk
   121535524
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121535524
CD molecules [BR:cclu04090]
 Proteins
  121535524
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 FG-GAP_2 LYRIC
Other DBs
NCBI-GeneID: 121535524
NCBI-ProteinID: XP_041698601
LinkDB
Position
21:38083423..38124643
AA seq 1058 aa
MGDRWIQFLSSLSLLFLLEWTQISAFNLDTENVLIMNGEPGSLFGFSLAMHRQLDPVDKI
MLLVGAPKAKALGGQKSKVTGGLYNCDTTSSSCKRVEFDNNENLKTESKENQWMGVTVNS
QGPGGKIVTCAHRYQMRLFVSTPQESRDITGRCYVLSQDLTINAQSDEDGGNWRFCEGRA
RGHERFGSCQQGLSATFTRDYEYLVFGAPGAYDWKGMVRVEHKNNTLLEMRSYKDGPYEV
GDENQLNPDLVPVPPNSYLGFSLDSGKYITKKGQLTVVAGAPRAHHSGEVVLLKKESDVS
SMLSPEYILEGEGLASSFGYDLAVVDLTGDGWQDIVVGAPQFFEKDGKVGGAIYAYINKG
GVWSKLTPTRIDGPQDSMFGLAVENLGDLNLDGYQDIAVGAPYDDNGAGKVFIYHGSAQG
INIKPAQVLSGVPSKTRLFGYSLAGNMDLDRNSYPDLAIGSLSDSVFVYRARPVINIQKV
VKTVPKEIDLTKKNCGNSICLEVEACFSYTANPKSYNPKLTVAYSFEAEVERRKKGLPPR
VTFSTRSSEDHDYESTGVLTLSAQGKKECVTAKLTLQENIKDKLRGIPIEVTVEIQNSKR
KRRALPGLMPILDSNQPITARAEVSFLKEGCGSDNVCQSNLQLQHRFYYREPNKDIFILL
PVENGVPVVSLSDQTDIALEITVTNQNGDDAHEASLVASFPSSLSYSASRSAPNADRQVT
CVANKNGSQADCELGNPFKRDSEVKFYIILSTAGISLNTTELEIDLKLETTSDQQKVGGV
KAKAKVVIELQLSLTGVAKPSQVYFTGEVKGESAMKSEGDIGSPIEYEFRVINLGKPLKT
YGTASLIINWPKETVEGKWILYLVKIDSQGLEQITCSPEREINPLTVKEERSSSRRRRAV
GETDKPEGTIALLTDKRKYTTLSCEDGAKCVEIRCSIKGLDSNAVILLRARLWNSTFLEE
YSKLNYLDVIVKASLRVDGTAKNMVLRNPETQVRVTVFPERRVAQYGGLPWWIILVAILL
GLLLLGLLVFLLWKCGFFGKKKEDAPPSDKERLTPSDA
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgggggatagatggatacaattcctctcatctctatcgcttctctttctcctggaatgg
acgcaaatatcagctttcaacctggacacagaaaacgtcctgataatgaacggagagccc
gggagcctttttggcttctctctcgctatgcaccggcagttagatccggtggataagata
atgttgctggttggtgctccgaaggccaaagctctaggaggtcagaagtcaaaggtcaca
ggaggactctacaactgtgacaccacttcctccagctgtaaacgtgtggagtttgacaac
aatgagaacctgaaaactgagagtaaggagaaccagtggatgggtgtaacagtgaacagc
cagggaccaggaggaaagattgtgacgtgtgcccaccgctaccagatgcgtctgtttgtg
agcacgccccaggaatctcgtgacatcacagggaggtgttatgtgctgagccaggacctg
acaatcaatgcccagtctgatgaggacggagggaactggaggttctgtgaggggcgggca
cgtgggcatgagaggtttggctcatgccaacagggtctgtctgccaccttcactagggac
tatgaatacctagtgtttggagctcctggagcatacgactggaaaggtatggtgagagta
gagcataagaacaacactctgttggagatgcgttcgtataaagacgggccctatgaggtg
ggtgatgagaaccagttaaacccagacctggtccctgtgccccctaacagctacctgggc
ttctctctggactcggggaagtacatcactaagaagggtcagctgacagtggttgcaggg
gctccgagagcccatcacagtggagaggtggtgttgctaaagaaggagtccgatgtatcc
tccatgctgtcaccagagtacatcctggaaggggaggggctagcctcatcgttcggctac
gaccttgctgtggtggatctcactggagacgggtggcaggatatcgtggtgggagcccct
cagttctttgagaaggatggaaaggtgggcggggctatttatgcctatattaacaagggc
ggagtctggagtaagctcacacccaccaggatagacggacctcaggactccatgttcgga
ctggctgtagaaaacctgggagatctcaacttggacggttatcaggacattgctgtggga
gcaccatatgatgacaatggggcagggaaagtgttcatctaccatggctcagctcagggc
attaatatcaaacctgcacaggtgttgtcaggggtgccatcaaagacgaggttgttcggt
tattctctagctggtaacatggacctggacaggaattcctaccctgacctggccatagga
tctctctccgactctgtgtttgtctacagagctcggccagtcatcaacatccagaaggtt
gtcaagacagtgccaaaggagattgatctgactaagaagaactgtggcaacagcatttgc
ttggaggtagaggcctgtttctcctacacagccaaccctaaatcctataaccccaaactg
acggtagcgtactcctttgaagcggaggtggagcgtaggaagaagggtcttccccccaga
gtaaccttctccacacgttccagcgaggaccatgactacgagtccactggtgttctcacc
ctcagtgcacagggcaagaaggagtgtgtcaccgccaaactcactctacaggagaacatt
aaggacaagcttaggggaatccccatcgaggttaccgtggagatacagaactccaaaagg
aagagaagagcgctcccagggctcatgcccatcctcgactccaaccagcctatcacggcc
cgcgctgaggtgagtttcctgaaggaaggatgtggcagtgataatgtgtgtcagagtaac
ttacagcttcagcaccgcttctactacagagaacccaacaaggacatcttcattctacta
cctgtggagaatggggtgccagtggtctcccttagcgaccagacggacatcgccctggag
atcacagtgaccaatcagaatggagatgatgctcatgaggcgtcattggttgcctccttc
ccctcctctctctcctactccgcctcccgctctgcacccaacgcagacaggcaggtgacc
tgtgtggccaataagaatggctctcaggcagactgtgagctggggaaccccttcaagcga
gactcagaggtgaagttctacatcatcctgagtacagcaggcatctctctgaacaccaca
gagctggagatagacctgaagctggagacgacaagtgaccagcagaaggtgggcggagtc
aaggccaaggccaaagtggtgatcgagctgcagctgtccctcacaggagtggccaagccc
tcccaggtctatttcactggagaggtcaaaggtgagagcgccatgaagtcagagggagac
atcggcagcccgatcgagtacgagttcagggtgatcaacctagggaagcccctgaagacc
tatggcaccgcctccctgatcatcaattggccgaaggaaaccgtggaggggaagtggatc
ctgtacctggtgaagattgactcccaaggtctggaacagatcacatgctctccagagaga
gagatcaacccactcactgtcaaagaggagaggagcagtagcaggaggaggcgggctgta
ggggagacagacaaacctgagggaaccatcgcactgctgactgacaagaggaaatacact
actctgtcgtgtgaggatggggcaaagtgtgtggagattcgctgctccataaagggcctg
gacagtaatgcagtcatcctgctcagggctcgcctctggaacagcacattcctggaggag
tactccaagctgaactatctggacgtgatagtgaaagcctctctcagagtggacggcaca
gctaagaacatggtcctgaggaaccctgagacacaggtgagagtgacagtgttcccagag
cgtcgtgtggctcagtacggaggactgccatggtggatcatcctggtggccatcttgtta
ggactgctgctgctcggcctgctggtcttcctgctctggaagtgtggtttcttcgggaag
aagaaagaggatgcccctccctctgacaaagagcgattgacgccgtctgatgcataa

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