Coregonus clupeaformis (lake whitefish): 121535529
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Entry
121535529 CDS
T08357
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00250
Alanine, aspartate and glutamate metabolism
cclu00410
beta-Alanine metabolism
cclu00430
Taurine and hypotaurine metabolism
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
Module
cclu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121535529 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121535529 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121535529 (gad1b)
00430 Taurine and hypotaurine metabolism
121535529 (gad1b)
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121535529 (gad1b)
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
121535529
NCBI-ProteinID:
XP_041698620
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All DBs
Position
21:37872621..37901176
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AA seq
587 aa
AA seq
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MATSEPTATGGDQDPNSANLRPSTNYDAWMQGCTRKLGLKICGFLQKNNSLGEEGRIAGS
LSERKNNLFSCDNSDRDARFQRTETDFSNMFARDLLPAKNGEEATMQFLLELVDILTNYV
RKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFF
NQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPSGEGDGIF
SPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGSENV
VLLSTDERGRVIPADLEAKILDVKQKGYHPLFVNATAGSTVYGAFDPINEIADICEKYNM
WLHVDGAWGGGLLMSRKHRHKFSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGCN
SMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLSQ
YLYDKIRNREGYEMVFQGVPQHTNVCFWYIPPSLRGLEHNSEEYREKLHMVAPKIKAMMM
ESGTTMVGYQPQGQKVNFFRMVVSNPAALQSDIDFLIDEIERLGHDL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtctgaaccgacagccactggcggggaccaggaccccaactccgccaattta
cgaccatccacaaactatgacgcgtggatgcaaggctgcacgcggaaactggggttgaag
atctgtgggttcctgcagaagaacaacagtcttggggaggaaggccggatcgcaggctca
ctctcagaacgcaagaataacctgttctcctgtgacaacagcgatcgggatgcccgcttc
cagcgcactgagaccgatttctccaacatgttcgcgagagacttacttcccgccaaaaat
ggagaagaggcgactatgcagttcttgttggaacttgtggacatcctcaccaactacgtc
aggaagacattcgaccgttccaccaaggttctggacttccaccaccctcaccagctgctc
gagggcatggagggattcaacctcgagctctctgaccagccagagtccctcgagcagatc
ctcgtggactgcagggacacgctcaagtacggcgtgcgaacaggtcatccacggttcttc
aaccagctctccactgggctagacatcattgggctcgctggggagtggctcacctctaca
gccaacaccaacatgttcacctatgagatcgctccagtgtttgtcctgatggagcagctg
acgctgaagaagatgagagagatgattggctggccctcgggagagggggacggcatattc
tcaccagggggtgccatctctaacatgtacagtgtgatgattgctcgctacaagtacttc
cctgaggtcaagaccaagggcatgtctgccgctccccgcctggtgctcttcacatcagaa
catagccactactctatcaagaaggccggggcagctctgggctttggttctgagaatgtg
gtcctgctgagtacagatgagagggggagagttattcctgctgatctagaagctaagatc
ctcgatgtcaagcagaagggttaccatcctctgtttgtgaacgctacagctggttctaca
gtctacggagcatttgaccccatcaacgagatcgctgacatctgcgagaaatacaacatg
tggctgcacgtagacggtgcatggggaggtggtctcctgatgtccaggaagcatcgccat
aagttcagtggtgttgagagggctaactctgtcacatggaatcctcacaagatgatggga
gtgcctctacagtgctccgctatcctggtccgagaaaagggtattctggcaggctgtaac
tccatgtgtgctggctacctgttccagcctgataaacagtatgatgtcagctatgacacg
ggagacaaggccatccagtgtggccgacacgtcgacatcttcaagttctggctcatgtgg
aaggccaagggcactataggatttgagcagcacattgacaagtgtctggacctgtctcag
tacctctacgacaagatcagaaacagagagggatacgagatggtgttccagggagtgccc
cagcacaccaacgtgtgtttctggtacatcccacccagtctgagaggtttggaacacaac
agcgaggagtatcgagagaaacttcacatggtggcgcccaagatcaaggcgatgatgatg
gagtcagggacgaccatggtgggctaccagcctcagggccagaaggtcaacttcttccgc
atggtcgtctccaaccccgcagccctccagtcagacatcgacttcctcattgacgagatc
gagaggctggggcatgacctgtag
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